RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-222ENST00000620505 PUS7Q96PZ0 661 aaKnown RBP12.3□□□□□ -0.44
TARDBP-222ENST00000620505 HOXC9P31274 260 aa12.29□□□□□ -0.44
TARDBP-222ENST00000620505 KCNQ4P56696 695 aa12.29□□□□□ -0.44
TARDBP-222ENST00000620505 POLA2Q14181 598 aa12.29□□□□□ -0.44
TARDBP-222ENST00000620505 RRS1Q15050 365 aaKnown RBP12.29□□□□□ -0.44
TARDBP-222ENST00000620505 GGNBP2Q9H3C7 697 aa12.29□□□□□ -0.44
TARDBP-222ENST00000620505 BTAF1O14981 1849 aa12.28□□□□□ -0.44
TARDBP-222ENST00000620505 ZNF827Q17R98 1081 aa12.28□□□□□ -0.44
TARDBP-222ENST00000620505 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
TARDBP-222ENST00000620505 LRRC4BQ9NT99 713 aa12.28□□□□□ -0.44
TARDBP-222ENST00000620505 FHDC1Q9C0D6 1143 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-222ENST00000620505 MTFR1LQ9H019 292 aa12.27□□□□□ -0.45
TARDBP-222ENST00000620505 ANKRD36BQ8N2N9 1353 aa12.27□□□□□ -0.45
TARDBP-222ENST00000620505 PRIM1P49642 420 aaKnown RBP12.26□□□□□ -0.45
TARDBP-222ENST00000620505 TMF1P82094 1093 aa12.26□□□□□ -0.45
TARDBP-222ENST00000620505 TRIM26Q12899 539 aaPredicted RBP12.26□□□□□ -0.45
TARDBP-222ENST00000620505 USP47Q96K76 1375 aa12.26□□□□□ -0.45
TARDBP-222ENST00000620505 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 FYB1O15117 783 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 NBPF6Q5VWK0 638 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 KLHL34Q8N239 644 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
TARDBP-222ENST00000620505 NBPF4Q96M43 638 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 MEGF6O75095 1541 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 PAPPAQ13219 1627 aa12.25□□□□□ -0.45
TARDBP-222ENST00000620505 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
TARDBP-222ENST00000620505 FAM208AQ9UK61 1670 aaKnown RBP12.24□□□□□ -0.45
TARDBP-222ENST00000620505 AKT1S1Q96B36 256 aa12.23□□□□□ -0.45
TARDBP-222ENST00000620505 ARXQ96QS3 562 aa12.23□□□□□ -0.45
TARDBP-222ENST00000620505 KAT6BQ8WYB5 2073 aa12.23□□□□□ -0.45
TARDBP-222ENST00000620505 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
TARDBP-222ENST00000620505 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
TARDBP-222ENST00000620505 HSP90AB2PQ58FF8 381 aa12.22□□□□□ -0.45
TARDBP-222ENST00000620505 NSD2O96028 1365 aa12.21□□□□□ -0.45
TARDBP-222ENST00000620505 RAPGEF4Q8WZA2 1011 aa12.21□□□□□ -0.45
TARDBP-222ENST00000620505 POLR3GLQ9BT43 218 aa12.21□□□□□ -0.45
TARDBP-222ENST00000620505 TFCP2L1Q9NZI6 479 aa12.21□□□□□ -0.45
TARDBP-222ENST00000620505 SHANK3Q9BYB0 1731 aa12.2□□□□□ -0.46
TARDBP-222ENST00000620505 RTL1A6NKG5 1358 aa12.2□□□□□ -0.46
TARDBP-222ENST00000620505 PNPLA7Q6ZV29 1317 aa12.2□□□□□ -0.46
TARDBP-222ENST00000620505 TATP17735 454 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-222ENST00000620505 SLC27A3Q5K4L6 730 aa12.2□□□□□ -0.46
TARDBP-222ENST00000620505 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
TARDBP-222ENST00000620505 CCNL1Q9UK58 526 aaPredicted RBP12.2□□□□□ -0.46
TARDBP-222ENST00000620505 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
TARDBP-222ENST00000620505 PPM1GO15355 546 aaPredicted RBP12.19□□□□□ -0.46
TARDBP-222ENST00000620505 PCGF6Q9BYE7 350 aa12.19□□□□□ -0.46
TARDBP-222ENST00000620505 EMILIN1Q9Y6C2 1016 aa12.19□□□□□ -0.46
TARDBP-222ENST00000620505 KIF20BQ96Q89 1820 aa12.18□□□□□ -0.46
TARDBP-222ENST00000620505 POLD1P28340 1107 aa12.18□□□□□ -0.46
TARDBP-222ENST00000620505 CDCA8Q53HL2 280 aa12.18□□□□□ -0.46
TARDBP-222ENST00000620505 PELP1Q8IZL8 1130 aaKnown RBP12.18□□□□□ -0.46
TARDBP-222ENST00000620505 NSD3Q9BZ95 1437 aa12.18□□□□□ -0.46
TARDBP-222ENST00000620505 INSRP06213 1382 aa12.18□□□□□ -0.46
TARDBP-222ENST00000620505 GPR162Q16538 588 aa12.17□□□□□ -0.46
TARDBP-222ENST00000620505 FLT4P35916 1363 aa12.17□□□□□ -0.46
TARDBP-222ENST00000620505 MSL1Q68DK7 614 aa12.16□□□□□ -0.46
TARDBP-222ENST00000620505 MPRIPQ6WCQ1 1025 aa12.16□□□□□ -0.46
TARDBP-222ENST00000620505 COL23A1Q86Y22 540 aaPredicted RBP12.16□□□□□ -0.46
TARDBP-222ENST00000620505 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
TARDBP-222ENST00000620505 SLC16A10Q8TF71 515 aa12.16□□□□□ -0.46
TARDBP-222ENST00000620505 LY75O60449 1722 aa12.16□□□□□ -0.46
TARDBP-222ENST00000620505 TUBGCP6Q96RT7 1819 aa12.16□□□□□ -0.46
TARDBP-222ENST00000620505 CGNL1Q0VF96 1302 aa12.15□□□□□ -0.46
TARDBP-222ENST00000620505 PCDH11XQ9BZA7 1347 aa12.15□□□□□ -0.46
TARDBP-222ENST00000620505 PCDH11YQ9BZA8 1340 aa12.15□□□□□ -0.46
TARDBP-222ENST00000620505 CYP27B1O15528 508 aa12.15□□□□□ -0.46
TARDBP-222ENST00000620505 ZNF784Q8NCA9 323 aaPredicted RBP12.15□□□□□ -0.46
TARDBP-222ENST00000620505 NLGN2Q8NFZ4 835 aa12.15□□□□□ -0.46
TARDBP-222ENST00000620505 TNNT2P45379 298 aaPredicted RBP12.14□□□□□ -0.47
TARDBP-222ENST00000620505 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
TARDBP-222ENST00000620505 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
TARDBP-222ENST00000620505 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
TARDBP-222ENST00000620505 MAP3K5Q99683 1374 aa12.13□□□□□ -0.47
TARDBP-222ENST00000620505 KIF24Q5T7B8 1368 aa12.11□□□□□ -0.47
TARDBP-222ENST00000620505 EYA1Q99502 592 aa12.11□□□□□ -0.47
TARDBP-222ENST00000620505 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
TARDBP-222ENST00000620505 HAX1O00165 279 aa12.1□□□□□ -0.47
TARDBP-222ENST00000620505 PHF14O94880 888 aa12.1□□□□□ -0.47
TARDBP-222ENST00000620505 PIGBQ92521 554 aa12.1□□□□□ -0.47
TARDBP-222ENST00000620505 POLKQ9UBT6 870 aa12.1□□□□□ -0.47
TARDBP-222ENST00000620505 SPG7Q9UQ90 795 aa12.1□□□□□ -0.47
TARDBP-222ENST00000620505 C5P01031 1676 aa12.1□□□□□ -0.47
TARDBP-222ENST00000620505 COL24A1Q17RW2 1714 aa12.09□□□□□ -0.47
TARDBP-222ENST00000620505 AMIGO3Q86WK7 504 aa12.09□□□□□ -0.47
TARDBP-222ENST00000620505 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
TARDBP-222ENST00000620505 AK7Q96M32 723 aa12.09□□□□□ -0.47
TARDBP-222ENST00000620505 WASHC2AQ641Q2 1341 aa12.09□□□□□ -0.47
TARDBP-222ENST00000620505 MYCNP04198 464 aaPredicted RBP12.08□□□□□ -0.48
TARDBP-222ENST00000620505 YBX3P16989 372 aaKnown RBP eCLIP12.08□□□□□ -0.488e-13■□□□□ 8.1
TARDBP-222ENST00000620505 SMARCC1Q92922 1105 aaPredicted RBP12.08□□□□□ -0.48
TARDBP-222ENST00000620505 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
TARDBP-222ENST00000620505 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.48
TARDBP-222ENST00000620505 ITGB4P16144 1822 aa12.07□□□□□ -0.48
TARDBP-222ENST00000620505 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
TARDBP-222ENST00000620505 EIF4A2Q14240 407 aaKnown RBP12.07□□□□□ -0.48
TARDBP-222ENST00000620505 TMOD3Q9NYL9 352 aa12.07□□□□□ -0.48
TARDBP-222ENST00000620505 WWC3Q9ULE0 1092 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms