RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 HSP90AB2PQ58FF8 381 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 PHACTR3Q96KR7 559 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 CYP46A1Q9Y6A2 500 aa16.7■□□□□ 0.26
CNOT3-210ENST00000618939 PDCP20941 246 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 ANKLE2Q86XL3 938 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 TSPYL6Q8N831 410 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 YTHDC2Q9H6S0 1430 aaKnown RBP16.69■□□□□ 0.26
CNOT3-210ENST00000618939 TTC22Q5TAA0 569 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 KIF1BPQ96EK5 621 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 UPF3BQ9BZI7 483 aaKnown RBP16.69■□□□□ 0.26
CNOT3-210ENST00000618939 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 TATP17735 454 aaPredicted RBP16.69■□□□□ 0.26
CNOT3-210ENST00000618939 SIL1Q9H173 461 aa16.69■□□□□ 0.26
CNOT3-210ENST00000618939 CWC27Q6UX04 472 aaKnown RBP16.68■□□□□ 0.26
CNOT3-210ENST00000618939 AEBP1Q8IUX7 1158 aa16.68■□□□□ 0.26
CNOT3-210ENST00000618939 SBNO2Q9Y2G9 1366 aa16.68■□□□□ 0.26
CNOT3-210ENST00000618939 ESPNB1AK53 854 aa16.68■□□□□ 0.26
CNOT3-210ENST00000618939 CEBPAP49715 358 aaPredicted RBP16.68■□□□□ 0.26
CNOT3-210ENST00000618939 USHBP1Q8N6Y0 703 aa16.68■□□□□ 0.26
CNOT3-210ENST00000618939 DNAJC2Q99543 621 aaKnown RBP16.68■□□□□ 0.26
CNOT3-210ENST00000618939 LRRFIP2Q9Y608 721 aaKnown RBP16.68■□□□□ 0.26
CNOT3-210ENST00000618939 SASS6Q6UVJ0 657 aa16.68■□□□□ 0.26
CNOT3-210ENST00000618939 ABCC1P33527 1531 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 TTC37Q6PGP7 1564 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 AACSQ86V21 672 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 PREX2Q70Z35 1606 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 UHRF1BP1LA0JNW5 1464 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 FOSBP53539 338 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 MEIS3Q99687 375 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 APPP05067 770 aa16.67■□□□□ 0.26
CNOT3-210ENST00000618939 LETM1O95202 739 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-210ENST00000618939 TRDNQ13061 729 aa16.66■□□□□ 0.26
CNOT3-210ENST00000618939 KCNH5Q8NCM2 988 aa16.66■□□□□ 0.26
CNOT3-210ENST00000618939 RAB11FIP3O75154 756 aa16.66■□□□□ 0.26
CNOT3-210ENST00000618939 ANKRD44Q8N8A2 993 aa16.66■□□□□ 0.26
CNOT3-210ENST00000618939 CCDC73Q6ZRK6 1079 aa16.66■□□□□ 0.26
CNOT3-210ENST00000618939 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
CNOT3-210ENST00000618939 TRIM35Q9UPQ4 493 aa16.66■□□□□ 0.26
CNOT3-210ENST00000618939 EIF4A2Q14240 407 aaKnown RBP16.66■□□□□ 0.26
CNOT3-210ENST00000618939 FAM13BQ9NYF5 915 aa16.66■□□□□ 0.26
CNOT3-210ENST00000618939 R3HCC1Q9Y3T6 440 aaKnown RBP16.66■□□□□ 0.26
CNOT3-210ENST00000618939 NPATQ14207 1427 aa16.65■□□□□ 0.26
CNOT3-210ENST00000618939 XPCQ01831 940 aaPredicted RBP16.65■□□□□ 0.26
CNOT3-210ENST00000618939 TNRQ92752 1358 aa16.65■□□□□ 0.26
CNOT3-210ENST00000618939 BCORL1Q5H9F3 1711 aa16.65■□□□□ 0.26
CNOT3-210ENST00000618939 ZNF521Q96K83 1311 aa16.65■□□□□ 0.26
CNOT3-210ENST00000618939 MYL6BP14649 208 aa16.65■□□□□ 0.26
CNOT3-210ENST00000618939 WASHC4Q2M389 1173 aa16.65■□□□□ 0.26
CNOT3-210ENST00000618939 KDM5AP29375 1690 aaKnown RBP16.65■□□□□ 0.26
CNOT3-210ENST00000618939 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 PRDM15P57071 1507 aaPredicted RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 GLRX3O76003 335 aaKnown RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 SYNE3Q6ZMZ3 975 aa16.64■□□□□ 0.25
CNOT3-210ENST00000618939 JAKMIP1Q96N16 626 aaKnown RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 PHF8Q9UPP1 1060 aa16.64■□□□□ 0.25
CNOT3-210ENST00000618939 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 RALYLQ86SE5 291 aaKnown RBP16.64■□□□□ 0.25
CNOT3-210ENST00000618939 CDC42BPAQ5VT25 1732 aa16.63■□□□□ 0.25
CNOT3-210ENST00000618939 TRPM2O94759 1503 aa16.63■□□□□ 0.25
CNOT3-210ENST00000618939 ERVK-7P63135 1459 aa16.63■□□□□ 0.25
CNOT3-210ENST00000618939 SDSP20132 328 aa16.63■□□□□ 0.25
CNOT3-210ENST00000618939 DNAAF4Q8WXU2 420 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 SNX21Q969T3 373 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 ADCY10Q96PN6 1610 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 PDRG1Q9NUG6 133 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 TRIM29Q14134 588 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 ANKRD1Q15327 319 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 BLOC1S2Q6QNY1 142 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 SPG7Q9UQ90 795 aa16.62■□□□□ 0.25
CNOT3-210ENST00000618939 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
CNOT3-210ENST00000618939 SYTL4Q96C24 671 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-210ENST00000618939 SYNMO15061 1565 aa16.61■□□□□ 0.25
CNOT3-210ENST00000618939 TSHZ3Q63HK5 1081 aa16.61■□□□□ 0.25
CNOT3-210ENST00000618939 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
CNOT3-210ENST00000618939 KRT24Q2M2I5 525 aa16.61■□□□□ 0.25
CNOT3-210ENST00000618939 LARP1BQ659C4 914 aaKnown RBP16.61■□□□□ 0.25
CNOT3-210ENST00000618939 ZSCAN31Q96LW9 406 aaPredicted RBP16.61■□□□□ 0.25
CNOT3-210ENST00000618939 ZBTB7BO15156 539 aaPredicted RBP16.6■□□□□ 0.25
CNOT3-210ENST00000618939 DCTPP1Q9H773 170 aa16.6■□□□□ 0.25
CNOT3-210ENST00000618939 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
CNOT3-210ENST00000618939 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
CNOT3-210ENST00000618939 NCKAP5LQ9HCH0 1330 aa16.6■□□□□ 0.25
CNOT3-210ENST00000618939 SYCE3A1L190 88 aa16.6■□□□□ 0.25
CNOT3-210ENST00000618939 CASTP20810 708 aaKnown RBP16.6■□□□□ 0.25
CNOT3-210ENST00000618939 CABP4P57796 275 aa16.6■□□□□ 0.25
CNOT3-210ENST00000618939 AKAP17AQ02040 695 aaKnown RBP16.6■□□□□ 0.25
CNOT3-210ENST00000618939 KRT85P78386 507 aa16.6■□□□□ 0.25
CNOT3-210ENST00000618939 MPRIPQ6WCQ1 1025 aa16.6■□□□□ 0.25
CNOT3-210ENST00000618939 RBM42Q9BTD8 480 aaKnown RBP16.6■□□□□ 0.25
CNOT3-210ENST00000618939 STK3Q13188 491 aa16.59■□□□□ 0.25
CNOT3-210ENST00000618939 AMOTQ4VCS5 1084 aa16.59■□□□□ 0.25
CNOT3-210ENST00000618939 C16orf71Q8IYS4 520 aaPredicted RBP16.59■□□□□ 0.25
CNOT3-210ENST00000618939 RASSF8Q8NHQ8 419 aa16.58■□□□□ 0.25
CNOT3-210ENST00000618939 LRRIQ1Q96JM4 1722 aa16.58■□□□□ 0.25
CNOT3-210ENST00000618939 ZNF592Q92610 1267 aa16.58■□□□□ 0.25
CNOT3-210ENST00000618939 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.25
CNOT3-210ENST00000618939 PIK3R4Q99570 1358 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms