RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 TBX22Q9Y458 520 aa21.15■□□□□ 0.98
SEMA3B-213ENST00000618865 CHL1O00533 1208 aa21.14■□□□□ 0.97
SEMA3B-213ENST00000618865 MIS18AQ9NYP9 233 aa21.14■□□□□ 0.97
SEMA3B-213ENST00000618865 ANTXR1Q9H6X2 564 aa21.13■□□□□ 0.97
SEMA3B-213ENST00000618865 NGDNQ8NEJ9 315 aaKnown RBP21.13■□□□□ 0.97
SEMA3B-213ENST00000618865 PIK3C2AO00443 1686 aa21.13■□□□□ 0.97
SEMA3B-213ENST00000618865 API5Q9BZZ5 524 aaKnown RBP21.12■□□□□ 0.97
SEMA3B-213ENST00000618865 SPRYD3Q8NCJ5 442 aa21.12■□□□□ 0.97
SEMA3B-213ENST00000618865 RGS12O14924 1447 aa21.12■□□□□ 0.97
SEMA3B-213ENST00000618865 CRB1P82279 1406 aa21.11■□□□□ 0.97
SEMA3B-213ENST00000618865 GSE1Q14687 1217 aa21.11■□□□□ 0.97
SEMA3B-213ENST00000618865 MTHFSDQ2M296 383 aaKnown RBP21.11■□□□□ 0.97
SEMA3B-213ENST00000618865 TTC21AQ8NDW8 1320 aa21.1■□□□□ 0.97
SEMA3B-213ENST00000618865 GCC1Q96CN9 775 aa21.1■□□□□ 0.97
SEMA3B-213ENST00000618865 CEP170BQ9Y4F5 1589 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-213ENST00000618865 NUTM2GQ5VZR2 741 aa21.1■□□□□ 0.97
SEMA3B-213ENST00000618865 XRN1Q8IZH2 1706 aaKnown RBP21.09■□□□□ 0.97
SEMA3B-213ENST00000618865 KCNA6P17658 529 aa21.08■□□□□ 0.97
SEMA3B-213ENST00000618865 ARHGEF10O15013 1369 aa21.08■□□□□ 0.97
SEMA3B-213ENST00000618865 THEMISQ8N1K5 641 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-213ENST00000618865 EYA1Q99502 592 aa21.08■□□□□ 0.96
SEMA3B-213ENST00000618865 CHMP4BQ9H444 224 aaKnown RBP21.08■□□□□ 0.96
SEMA3B-213ENST00000618865 SBNO1A3KN83 1393 aa21.07■□□□□ 0.96
SEMA3B-213ENST00000618865 FLT4P35916 1363 aa21.07■□□□□ 0.96
SEMA3B-213ENST00000618865 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
SEMA3B-213ENST00000618865 MARF1Q9Y4F3 1742 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-213ENST00000618865 AMPHP49418 695 aa21.06■□□□□ 0.96
SEMA3B-213ENST00000618865 BMP2KLQ5H9B9 411 aa21.06■□□□□ 0.96
SEMA3B-213ENST00000618865 INTS3Q68E01 1043 aaKnown RBP21.06■□□□□ 0.96
SEMA3B-213ENST00000618865 KIAA0232Q92628 1395 aa21.05■□□□□ 0.96
SEMA3B-213ENST00000618865 NLRP6P59044 892 aa21.05■□□□□ 0.96
SEMA3B-213ENST00000618865 RBM10P98175 930 aaKnown RBP21.05■□□□□ 0.96
SEMA3B-213ENST00000618865 MSH6P52701 1360 aa21.04■□□□□ 0.96
SEMA3B-213ENST00000618865 KDRP35968 1356 aa21.03■□□□□ 0.96
SEMA3B-213ENST00000618865 ATP10DQ9P241 1426 aa21.03■□□□□ 0.96
SEMA3B-213ENST00000618865 IGSF1Q8N6C5 1336 aa21.03■□□□□ 0.96
SEMA3B-213ENST00000618865 RBM33Q96EV2 1170 aaKnown RBP21.02■□□□□ 0.96
SEMA3B-213ENST00000618865 KIF24Q5T7B8 1368 aa21.02■□□□□ 0.96
SEMA3B-213ENST00000618865 SLC4A2P04920 1241 aa21.02■□□□□ 0.96
SEMA3B-213ENST00000618865 G2E3Q7L622 706 aa21.02■□□□□ 0.96
SEMA3B-213ENST00000618865 C16orf71Q8IYS4 520 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-213ENST00000618865 TSPYL4Q9UJ04 414 aa21.01■□□□□ 0.95
SEMA3B-213ENST00000618865 MEIS3Q99687 375 aa21.01■□□□□ 0.95
SEMA3B-213ENST00000618865 RBM25P49756 843 aaKnown RBP21■□□□□ 0.95
SEMA3B-213ENST00000618865 TBC1D9Q6ZT07 1266 aa21■□□□□ 0.95
SEMA3B-213ENST00000618865 DCTPP1Q9H773 170 aa21■□□□□ 0.95
SEMA3B-213ENST00000618865 RTF1Q92541 710 aaKnown RBP21■□□□□ 0.95
SEMA3B-213ENST00000618865 GSPT1P15170 499 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-213ENST00000618865 HOXC9P31274 260 aa20.99■□□□□ 0.95
SEMA3B-213ENST00000618865 F6X3S4 739 aa20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 GLIPR1L2Q4G1C9 344 aa20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 CEP85Q6P2H3 762 aa20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 ANKRD44Q8N8A2 993 aa20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 LTV1Q96GA3 475 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 RTL1A6NKG5 1358 aa20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 NWD1Q149M9 1564 aa20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 PLEKHM2Q8IWE5 1019 aa20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 OTUD7AQ8TE49 926 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-213ENST00000618865 PTPRCP08575 1304 aa20.97■□□□□ 0.95
SEMA3B-213ENST00000618865 ANKARQ7Z5J8 1434 aa20.97■□□□□ 0.95
SEMA3B-213ENST00000618865 KIF2CQ99661 725 aa20.97■□□□□ 0.95
SEMA3B-213ENST00000618865 ABTB2Q8N961 1025 aa20.97■□□□□ 0.95
SEMA3B-213ENST00000618865 APBB1O00213 710 aa20.96■□□□□ 0.95
SEMA3B-213ENST00000618865 HAP1P54257 671 aaPredicted RBP20.96■□□□□ 0.95
SEMA3B-213ENST00000618865 SMARCA5O60264 1052 aaPredicted RBP20.95■□□□□ 0.94
SEMA3B-213ENST00000618865 SLC4A10Q6U841 1118 aa20.94■□□□□ 0.94
SEMA3B-213ENST00000618865 USHBP1Q8N6Y0 703 aa20.94■□□□□ 0.94
SEMA3B-213ENST00000618865 GAS2L2Q8NHY3 880 aa20.94■□□□□ 0.94
SEMA3B-213ENST00000618865 LRRC37A3O60309 1634 aa20.94■□□□□ 0.94
SEMA3B-213ENST00000618865 C14orf37Q86TY3 774 aa20.94■□□□□ 0.94
SEMA3B-213ENST00000618865 HSCBQ8IWL3 235 aa20.94■□□□□ 0.94
SEMA3B-213ENST00000618865 NECTIN2Q92692 538 aa20.94■□□□□ 0.94
SEMA3B-213ENST00000618865 SETD1BQ9UPS6 1966 aaKnown RBP20.93■□□□□ 0.94
SEMA3B-213ENST00000618865 BRPF3Q9ULD4 1205 aa20.93■□□□□ 0.94
SEMA3B-213ENST00000618865 CD2BP2O95400 341 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-213ENST00000618865 RPAP2Q8IXW5 612 aaPredicted RBP20.92■□□□□ 0.94
SEMA3B-213ENST00000618865 RBM42Q9BTD8 480 aaKnown RBP20.92■□□□□ 0.94
SEMA3B-213ENST00000618865 USP54Q70EL1 1684 aa20.92■□□□□ 0.94
SEMA3B-213ENST00000618865 TRHP20396 242 aaPredicted RBP20.91■□□□□ 0.94
SEMA3B-213ENST00000618865 IL17REQ8NFR9 667 aa20.91■□□□□ 0.94
SEMA3B-213ENST00000618865 LTN1O94822 1766 aa20.91■□□□□ 0.94
SEMA3B-213ENST00000618865 GNAT3A8MTJ3 354 aa20.91■□□□□ 0.94
SEMA3B-213ENST00000618865 CHD2O14647 1828 aaKnown RBP20.91■□□□□ 0.94
SEMA3B-213ENST00000618865 TAF7LQ5H9L4 462 aa20.91■□□□□ 0.94
SEMA3B-213ENST00000618865 TTC22Q5TAA0 569 aa20.91■□□□□ 0.94
SEMA3B-213ENST00000618865 CDC45O75419 566 aa20.9■□□□□ 0.94
SEMA3B-213ENST00000618865 FAM208AQ9UK61 1670 aaKnown RBP20.9■□□□□ 0.94
SEMA3B-213ENST00000618865 NCOA3Q9Y6Q9 1424 aa20.89■□□□□ 0.94
SEMA3B-213ENST00000618865 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.94
SEMA3B-213ENST00000618865 SNX21Q969T3 373 aa20.89■□□□□ 0.93
SEMA3B-213ENST00000618865 CHMP5Q9NZZ3 219 aa20.89■□□□□ 0.93
SEMA3B-213ENST00000618865 MAP3K5Q99683 1374 aa20.87■□□□□ 0.93
SEMA3B-213ENST00000618865 DDIT3P35638 169 aa20.87■□□□□ 0.93
SEMA3B-213ENST00000618865 HTATSF1O43719 755 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-213ENST00000618865 DHX37Q8IY37 1157 aaKnown RBP20.86■□□□□ 0.93
SEMA3B-213ENST00000618865 MCM4P33991 863 aa20.86■□□□□ 0.93
SEMA3B-213ENST00000618865 FLIIQ13045 1269 aa20.85■□□□□ 0.93
SEMA3B-213ENST00000618865 STK31Q9BXU1 1019 aa20.85■□□□□ 0.93
SEMA3B-213ENST00000618865 RGPD2P0DJD1 1756 aa20.85■□□□□ 0.93
SEMA3B-213ENST00000618865 CCT4P50991 539 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms