RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CDC45O75419 566 aa14.67□□□□□ -0.06
MATR3-227ENST00000618441 DISP3Q9P2K9 1392 aa14.67□□□□□ -0.06
MATR3-227ENST00000618441 ZNF215Q9UL58 517 aaPredicted RBP14.67□□□□□ -0.06
MATR3-227ENST00000618441 NOB1Q9ULX3 412 aaKnown RBP14.67□□□□□ -0.06
MATR3-227ENST00000618441 ELL2O00472 640 aaPredicted RBP14.66□□□□□ -0.06
MATR3-227ENST00000618441 CCDC144AA2RUR9 1427 aa14.66□□□□□ -0.06
MATR3-227ENST00000618441 ABCA8O94911 1581 aa14.66□□□□□ -0.06
MATR3-227ENST00000618441 HTATSF1O43719 755 aaKnown RBP14.66□□□□□ -0.06
MATR3-227ENST00000618441 TTLL5Q6EMB2 1281 aa14.66□□□□□ -0.06
MATR3-227ENST00000618441 STK26Q9P289 416 aa14.66□□□□□ -0.06
MATR3-227ENST00000618441 ZNF397Q8NF99 534 aaPredicted RBP14.66□□□□□ -0.06
MATR3-227ENST00000618441 LRRFIP2Q9Y608 721 aaKnown RBP14.66□□□□□ -0.06
MATR3-227ENST00000618441 ASXL2Q76L83 1435 aa14.66□□□□□ -0.06
MATR3-227ENST00000618441 ANKRD65E5RJM6 399 aa14.65□□□□□ -0.06
MATR3-227ENST00000618441 KMT5BQ4FZB7 885 aa14.65□□□□□ -0.06
MATR3-227ENST00000618441 ROCK1Q13464 1354 aa14.65□□□□□ -0.06
MATR3-227ENST00000618441 MCCP23508 829 aa14.65□□□□□ -0.06
MATR3-227ENST00000618441 EXOSC9Q06265 439 aaKnown RBP14.65□□□□□ -0.06
MATR3-227ENST00000618441 USP48Q86UV5 1035 aa14.65□□□□□ -0.06
MATR3-227ENST00000618441 NINLQ9Y2I6 1382 aa14.65□□□□□ -0.06
MATR3-227ENST00000618441 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
MATR3-227ENST00000618441 TRIM27P14373 513 aa14.65□□□□□ -0.06
MATR3-227ENST00000618441 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
MATR3-227ENST00000618441 DHX16O60231 1041 aaKnown RBP14.64□□□□□ -0.07
MATR3-227ENST00000618441 CAMK4Q16566 473 aa14.64□□□□□ -0.07
MATR3-227ENST00000618441 LARP6Q9BRS8 491 aaKnown RBP14.64□□□□□ -0.07
MATR3-227ENST00000618441 CASC1Q6TDU7 716 aa14.64□□□□□ -0.07
MATR3-227ENST00000618441 CCDC141Q6ZP82 1450 aa14.64□□□□□ -0.07
MATR3-227ENST00000618441 SMTNL1A8MU46 457 aa14.64□□□□□ -0.07
MATR3-227ENST00000618441 FAM184AQ8NB25 1140 aa14.64□□□□□ -0.07
MATR3-227ENST00000618441 KIAA1107Q9UPP5 1409 aa14.64□□□□□ -0.07
MATR3-227ENST00000618441 IBSPP21815 317 aaPredicted RBP14.63□□□□□ -0.07
MATR3-227ENST00000618441 CEP135Q66GS9 1140 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 RTEL1-TNFRSF6BF6WH68 1400 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 FBXO38Q6PIJ6 1188 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 FBXW7Q969H0 707 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 DEF6Q9H4E7 631 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 ZDHHC9Q9Y397 364 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 MORC2Q9Y6X9 1032 aaPredicted RBP14.63□□□□□ -0.07
MATR3-227ENST00000618441 ZNF622Q969S3 477 aaKnown RBP eCLIP14.63□□□□□ -0.072e-13■□□□□ 9.5
MATR3-227ENST00000618441 FAM212AQ96EL1 285 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 MYCBPQ99417 103 aaPredicted RBP14.63□□□□□ -0.07
MATR3-227ENST00000618441 KCNF1Q9H3M0 494 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 GPS2Q13227 327 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 NRBP1Q9UHY1 535 aa14.63□□□□□ -0.07
MATR3-227ENST00000618441 LMAN1P49257 510 aa14.62□□□□□ -0.07
MATR3-227ENST00000618441 GNL2Q13823 731 aaKnown RBP14.62□□□□□ -0.07
MATR3-227ENST00000618441 TMEM132EQ6IEE7 984 aa14.62□□□□□ -0.07
MATR3-227ENST00000618441 TRMT2AQ8IZ69 625 aaKnown RBP14.62□□□□□ -0.07
MATR3-227ENST00000618441 ABCC10Q5T3U5 1492 aa14.62□□□□□ -0.07
MATR3-227ENST00000618441 BMP2KLQ5H9B9 411 aa14.61□□□□□ -0.07
MATR3-227ENST00000618441 FILIP1Q7Z7B0 1213 aa14.61□□□□□ -0.07
MATR3-227ENST00000618441 SPTLC3Q9NUV7 552 aa14.61□□□□□ -0.07
MATR3-227ENST00000618441 ABCC2Q92887 1545 aa14.61□□□□□ -0.07
MATR3-227ENST00000618441 MYO1CO00159 1063 aa14.61□□□□□ -0.07
MATR3-227ENST00000618441 CCAR2Q8N163 923 aaKnown RBP14.61□□□□□ -0.07
MATR3-227ENST00000618441 UPF3BQ9BZI7 483 aaKnown RBP14.61□□□□□ -0.07
MATR3-227ENST00000618441 ZCCHC17Q9NP64 241 aaKnown RBP14.61□□□□□ -0.07
MATR3-227ENST00000618441 SSH1Q8WYL5 1049 aa14.61□□□□□ -0.07
MATR3-227ENST00000618441 NCOA3Q9Y6Q9 1424 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 CCDC34Q96HJ3 373 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 EFCC1Q9HA90 598 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 TRAK1Q9UPV9 953 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 CNPY2Q9Y2B0 182 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 FANCAO15360 1455 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 NUCB1Q02818 461 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 SLC20A2Q08357 652 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 BMS1Q14692 1282 aaKnown RBP14.6□□□□□ -0.07
MATR3-227ENST00000618441 CHRM1P11229 460 aaPredicted RBP14.6□□□□□ -0.07
MATR3-227ENST00000618441 PTPN14Q15678 1187 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 ICE2Q659A1 982 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 MORC1Q86VD1 984 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 LCMT1Q9UIC8 334 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 TTC37Q6PGP7 1564 aa14.6□□□□□ -0.07
MATR3-227ENST00000618441 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.6□□□□□ -0.073e-7■□□□□ 11.1
MATR3-227ENST00000618441 CCDC183Q5T5S1 534 aa14.59□□□□□ -0.07
MATR3-227ENST00000618441 CD109Q6YHK3 1445 aa14.59□□□□□ -0.07
MATR3-227ENST00000618441 CKAP2LQ8IYA6 745 aa14.59□□□□□ -0.07
MATR3-227ENST00000618441 CWC15Q9P013 229 aaKnown RBP14.59□□□□□ -0.07
MATR3-227ENST00000618441 PZPP20742 1482 aa14.59□□□□□ -0.07
MATR3-227ENST00000618441 CTIFO43310 598 aaKnown RBP14.59□□□□□ -0.07
MATR3-227ENST00000618441 CFAP70Q5T0N1 1121 aa14.59□□□□□ -0.07
MATR3-227ENST00000618441 UVSSAQ2YD98 709 aa14.59□□□□□ -0.07
MATR3-227ENST00000618441 ATF7IPQ6VMQ6 1270 aa14.59□□□□□ -0.07
MATR3-227ENST00000618441 TULP2O00295 520 aa14.58□□□□□ -0.07
MATR3-227ENST00000618441 CASQ1P31415 396 aa14.58□□□□□ -0.07
MATR3-227ENST00000618441 ZSCAN26Q16670 478 aa14.58□□□□□ -0.07
MATR3-227ENST00000618441 ERCC6LQ2NKX8 1250 aa14.58□□□□□ -0.07
MATR3-227ENST00000618441 C16orf71Q8IYS4 520 aaPredicted RBP14.58□□□□□ -0.07
MATR3-227ENST00000618441 GOLGA6L4A6NEF3 574 aa14.58□□□□□ -0.08
MATR3-227ENST00000618441 LUZP1Q86V48 1076 aa14.58□□□□□ -0.08
MATR3-227ENST00000618441 ARMCX6Q7L4S7 300 aa14.58□□□□□ -0.08
MATR3-227ENST00000618441 PLCH2O75038 1416 aa14.58□□□□□ -0.08
MATR3-227ENST00000618441 TMX3Q96JJ7 454 aa14.57□□□□□ -0.08
MATR3-227ENST00000618441 ADGRL1O94910 1474 aa14.57□□□□□ -0.08
MATR3-227ENST00000618441 MBD5Q9P267 1494 aa14.57□□□□□ -0.08
MATR3-227ENST00000618441 DNMT1P26358 1616 aaKnown RBP14.57□□□□□ -0.08
MATR3-227ENST00000618441 ARHGEF12Q9NZN5 1544 aa14.57□□□□□ -0.08
MATR3-227ENST00000618441 TPM3P06753 285 aa14.57□□□□□ -0.08
MATR3-227ENST00000618441 HDAC1Q13547 482 aaPredicted RBP14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms