RNA–Protein interactions for RNA: ENST00000618048.2

KCNMA1-224, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 1 (best) BASIC

Gene KCNMA1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-224ENST00000618048 SYTL4Q96C24 671 aaPredicted RBP29.92■■■□□ 2.38
KCNMA1-224ENST00000618048 KIF20BQ96Q89 1820 aa29.9■■■□□ 2.38
KCNMA1-224ENST00000618048 PRIM1P49642 420 aaKnown RBP29.9■■■□□ 2.38
KCNMA1-224ENST00000618048 CDCA8Q53HL2 280 aa29.9■■■□□ 2.38
KCNMA1-224ENST00000618048 SYT17Q9BSW7 474 aa29.9■■■□□ 2.38
KCNMA1-224ENST00000618048 AKT1S1Q96B36 256 aa29.88■■■□□ 2.37
KCNMA1-224ENST00000618048 QSER1Q2KHR3 1735 aa29.88■■■□□ 2.37
KCNMA1-224ENST00000618048 NBPF6Q5VWK0 638 aa29.87■■■□□ 2.37
KCNMA1-224ENST00000618048 NBPF4Q96M43 638 aa29.87■■■□□ 2.37
KCNMA1-224ENST00000618048 ARXQ96QS3 562 aa29.87■■■□□ 2.37
KCNMA1-224ENST00000618048 NSD2O96028 1365 aa29.87■■■□□ 2.37
KCNMA1-224ENST00000618048 CGNL1Q0VF96 1302 aa29.86■■■□□ 2.37
KCNMA1-224ENST00000618048 USHBP1Q8N6Y0 703 aa29.85■■■□□ 2.37
KCNMA1-224ENST00000618048 LY75O60449 1722 aa29.85■■■□□ 2.37
KCNMA1-224ENST00000618048 RAPGEF4Q8WZA2 1011 aa29.84■■■□□ 2.37
KCNMA1-224ENST00000618048 INSRP06213 1382 aa29.84■■■□□ 2.37
KCNMA1-224ENST00000618048 FLT4P35916 1363 aa29.83■■■□□ 2.37
KCNMA1-224ENST00000618048 KIF24Q5T7B8 1368 aa29.82■■■□□ 2.36
KCNMA1-224ENST00000618048 MAP3K5Q99683 1374 aa29.82■■■□□ 2.36
KCNMA1-224ENST00000618048 KCNQ4P56696 695 aa29.82■■■□□ 2.36
KCNMA1-224ENST00000618048 SLC16A10Q8TF71 515 aa29.82■■■□□ 2.36
KCNMA1-224ENST00000618048 TUBGCP6Q96RT7 1819 aa29.8■■■□□ 2.36
KCNMA1-224ENST00000618048 PNPLA7Q6ZV29 1317 aa29.8■■■□□ 2.36
KCNMA1-224ENST00000618048 HSP90AB2PQ58FF8 381 aa29.8■■■□□ 2.36
KCNMA1-224ENST00000618048 TFCP2L1Q9NZI6 479 aa29.8■■■□□ 2.36
KCNMA1-224ENST00000618048 TATP17735 454 aaPredicted RBP29.79■■■□□ 2.36
KCNMA1-224ENST00000618048 NSD3Q9BZ95 1437 aa29.79■■■□□ 2.36
KCNMA1-224ENST00000618048 CARD14Q9BXL6 1004 aa29.77■■■□□ 2.36
KCNMA1-224ENST00000618048 CCNL1Q9UK58 526 aaPredicted RBP29.77■■■□□ 2.36
KCNMA1-224ENST00000618048 PCDH11XQ9BZA7 1347 aa29.76■■■□□ 2.36
KCNMA1-224ENST00000618048 PCDH11YQ9BZA8 1340 aa29.76■■■□□ 2.36
KCNMA1-224ENST00000618048 POLD1P28340 1107 aa29.75■■■□□ 2.35
KCNMA1-224ENST00000618048 COL24A1Q17RW2 1714 aa29.75■■■□□ 2.35
KCNMA1-224ENST00000618048 TIMELESSQ9UNS1 1208 aa29.74■■■□□ 2.35
KCNMA1-224ENST00000618048 EMILIN1Q9Y6C2 1016 aa29.72■■■□□ 2.35
KCNMA1-224ENST00000618048 KLHL34Q8N239 644 aa29.7■■■□□ 2.35
KCNMA1-224ENST00000618048 ANKRD26Q9UPS8 1709 aa29.7■■■□□ 2.34
KCNMA1-224ENST00000618048 PKD1L3Q7Z443 1732 aa29.68■■■□□ 2.34
KCNMA1-224ENST00000618048 C5P01031 1676 aa29.67■■■□□ 2.34
KCNMA1-224ENST00000618048 NCAPD2Q15021 1401 aa29.67■■■□□ 2.34
KCNMA1-224ENST00000618048 CLSPNQ9HAW4 1339 aa29.67■■■□□ 2.34
KCNMA1-224ENST00000618048 PALLDQ8WX93 1383 aa29.66■■■□□ 2.34
KCNMA1-224ENST00000618048 PPM1GO15355 546 aaPredicted RBP29.66■■■□□ 2.34
KCNMA1-224ENST00000618048 CYP27B1O15528 508 aa29.66■■■□□ 2.34
KCNMA1-224ENST00000618048 ZNF784Q8NCA9 323 aaPredicted RBP29.66■■■□□ 2.34
KCNMA1-224ENST00000618048 CHD4Q14839 1912 aa29.66■■■□□ 2.34
KCNMA1-224ENST00000618048 TOGARAM1Q9Y4F4 1720 aa29.65■■■□□ 2.34
KCNMA1-224ENST00000618048 MSH5O43196 834 aa29.65■■■□□ 2.34
KCNMA1-224ENST00000618048 GPR162Q16538 588 aa29.64■■■□□ 2.34
KCNMA1-224ENST00000618048 MPRIPQ6WCQ1 1025 aa29.63■■■□□ 2.33
KCNMA1-224ENST00000618048 COL23A1Q86Y22 540 aaPredicted RBP29.63■■■□□ 2.33
KCNMA1-224ENST00000618048 HMGB2P26583 209 aaKnown RBP29.62■■■□□ 2.33
KCNMA1-224ENST00000618048 WASHC2AQ641Q2 1341 aa29.61■■■□□ 2.33
KCNMA1-224ENST00000618048 UTRNP46939 3433 aa29.61■■■□□ 2.33
KCNMA1-224ENST00000618048 ITGB4P16144 1822 aa29.59■■■□□ 2.33
KCNMA1-224ENST00000618048 TAF1LQ8IZX4 1826 aa29.59■■■□□ 2.33
KCNMA1-224ENST00000618048 MAP2P11137 1827 aaKnown RBP29.58■■■□□ 2.33
KCNMA1-224ENST00000618048 PELP1Q8IZL8 1130 aaKnown RBP29.58■■■□□ 2.33
KCNMA1-224ENST00000618048 SMARCC1Q92922 1105 aaPredicted RBP29.58■■■□□ 2.33
KCNMA1-224ENST00000618048 POLR3GLQ9BT43 218 aa29.58■■■□□ 2.33
KCNMA1-224ENST00000618048 PCGF6Q9BYE7 350 aa29.58■■■□□ 2.33
KCNMA1-224ENST00000618048 SPG7Q9UQ90 795 aa29.58■■■□□ 2.33
KCNMA1-224ENST00000618048 NLGN2Q8NFZ4 835 aa29.57■■■□□ 2.32
KCNMA1-224ENST00000618048 MSL1Q68DK7 614 aa29.56■■■□□ 2.32
KCNMA1-224ENST00000618048 FLAD1Q8NFF5 587 aa29.56■■■□□ 2.32
KCNMA1-224ENST00000618048 EYA1Q99502 592 aa29.56■■■□□ 2.32
KCNMA1-224ENST00000618048 POLKQ9UBT6 870 aa29.56■■■□□ 2.32
KCNMA1-224ENST00000618048 C4BP0C0L5 1744 aa29.55■■■□□ 2.32
KCNMA1-224ENST00000618048 NKX1-1Q15270 411 aaPredicted RBP29.55■■■□□ 2.32
KCNMA1-224ENST00000618048 PIGBQ92521 554 aa29.54■■■□□ 2.32
KCNMA1-224ENST00000618048 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.53■■■□□ 2.32
KCNMA1-224ENST00000618048 AK7Q96M32 723 aa29.51■■■□□ 2.31
KCNMA1-224ENST00000618048 TNNT2P45379 298 aaPredicted RBP29.5■■■□□ 2.31
KCNMA1-224ENST00000618048 EIF4G2P78344 907 aaKnown RBP eCLIP29.48■■■□□ 2.31
KCNMA1-224ENST00000618048 EIF4A2Q14240 407 aaKnown RBP29.48■■■□□ 2.31
KCNMA1-224ENST00000618048 TMOD3Q9NYL9 352 aa29.48■■■□□ 2.31
KCNMA1-224ENST00000618048 IFNL2Q8IZJ0 200 aa29.47■■■□□ 2.31
KCNMA1-224ENST00000618048 UBR3Q6ZT12 1888 aa29.46■■■□□ 2.31
KCNMA1-224ENST00000618048 PHKG2P15735 406 aa29.46■■■□□ 2.31
KCNMA1-224ENST00000618048 PLEKHG2Q9H7P9 1386 aa29.46■■■□□ 2.31
KCNMA1-224ENST00000618048 LOC102724428A0A0B4J2F2 783 aa29.45■■■□□ 2.31
KCNMA1-224ENST00000618048 SIK1P57059 783 aa29.45■■■□□ 2.31
KCNMA1-224ENST00000618048 PHF14O94880 888 aa29.44■■■□□ 2.3
KCNMA1-224ENST00000618048 HSPA5P11021 654 aaKnown RBP29.44■■■□□ 2.3
KCNMA1-224ENST00000618048 YBX3P16989 372 aaKnown RBP eCLIP29.44■■■□□ 2.3
KCNMA1-224ENST00000618048 AMIGO3Q86WK7 504 aa29.44■■■□□ 2.3
KCNMA1-224ENST00000618048 GRIN3BO60391 1043 aa29.43■■■□□ 2.3
KCNMA1-224ENST00000618048 CD2APQ9Y5K6 639 aa29.43■■■□□ 2.3
KCNMA1-224ENST00000618048 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.42■■■□□ 2.3
KCNMA1-224ENST00000618048 LINC00116Q8NCU8 138 aa29.41■■■□□ 2.3
KCNMA1-224ENST00000618048 PANK3Q9H999 370 aa29.41■■■□□ 2.3
KCNMA1-224ENST00000618048 ASAP1Q9ULH1 1129 aa29.41■■■□□ 2.3
KCNMA1-224ENST00000618048 IGSF1Q8N6C5 1336 aa29.41■■■□□ 2.3
KCNMA1-224ENST00000618048 SSFA2P28290 1259 aa29.4■■■□□ 2.3
KCNMA1-224ENST00000618048 SMIM5Q71RC9 77 aa29.39■■■□□ 2.3
KCNMA1-224ENST00000618048 GOLGB1Q14789 3259 aaKnown RBP29.39■■■□□ 2.3
KCNMA1-224ENST00000618048 ATP6V1AP38606 617 aa29.37■■■□□ 2.29
KCNMA1-224ENST00000618048 C1QTNF8P60827 252 aa29.37■■■□□ 2.29
KCNMA1-224ENST00000618048 ITPK1Q13572 414 aa29.37■■■□□ 2.29
KCNMA1-224ENST00000618048 GNPATO15228 680 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms