RNA–Protein interactions for RNA: ENST00000617791.1

MALAT1-211, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 5 BASIC

Gene MALAT1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-211ENST00000617791 NBPF4Q96M43 638 aa21.45■■□□□ 1.02
MALAT1-211ENST00000617791 LRRC4BQ9NT99 713 aa21.45■■□□□ 1.02
MALAT1-211ENST00000617791 MYOM1P52179 1685 aa21.44■■□□□ 1.02
MALAT1-211ENST00000617791 RAPGEF4Q8WZA2 1011 aa21.43■■□□□ 1.02
MALAT1-211ENST00000617791 PCGF6Q9BYE7 350 aa21.43■■□□□ 1.02
MALAT1-211ENST00000617791 PAPPAQ13219 1627 aa21.43■■□□□ 1.02
MALAT1-211ENST00000617791 RGPD2P0DJD1 1756 aa21.42■■□□□ 1.02
MALAT1-211ENST00000617791 SLC27A3Q5K4L6 730 aa21.42■■□□□ 1.02
MALAT1-211ENST00000617791 HSP90AB2PQ58FF8 381 aa21.41■■□□□ 1.02
MALAT1-211ENST00000617791 FHDC1Q9C0D6 1143 aaPredicted RBP21.41■■□□□ 1.02
MALAT1-211ENST00000617791 NSD3Q9BZ95 1437 aa21.4■■□□□ 1.02
MALAT1-211ENST00000617791 KCNQ4P56696 695 aa21.4■■□□□ 1.02
MALAT1-211ENST00000617791 CARD14Q9BXL6 1004 aa21.4■■□□□ 1.02
MALAT1-211ENST00000617791 TIMELESSQ9UNS1 1208 aa21.4■■□□□ 1.02
MALAT1-211ENST00000617791 INSRP06213 1382 aa21.39■■□□□ 1.02
MALAT1-211ENST00000617791 FLT4P35916 1363 aa21.39■■□□□ 1.02
MALAT1-211ENST00000617791 KIF20BQ96Q89 1820 aa21.39■■□□□ 1.02
MALAT1-211ENST00000617791 CGNL1Q0VF96 1302 aa21.39■■□□□ 1.01
MALAT1-211ENST00000617791 TATP17735 454 aaPredicted RBP21.39■■□□□ 1.01
MALAT1-211ENST00000617791 DOT1LQ8TEK3 1739 aa21.38■■□□□ 1.01
MALAT1-211ENST00000617791 AKT1S1Q96B36 256 aa21.38■■□□□ 1.01
MALAT1-211ENST00000617791 ARXQ96QS3 562 aa21.38■■□□□ 1.01
MALAT1-211ENST00000617791 SGIP1Q9BQI5 828 aa21.38■■□□□ 1.01
MALAT1-211ENST00000617791 SYT17Q9BSW7 474 aa21.38■■□□□ 1.01
MALAT1-211ENST00000617791 POLR3GLQ9BT43 218 aa21.38■■□□□ 1.01
MALAT1-211ENST00000617791 NSD2O96028 1365 aa21.37■■□□□ 1.01
MALAT1-211ENST00000617791 TFCP2L1Q9NZI6 479 aa21.37■■□□□ 1.01
MALAT1-211ENST00000617791 SHANK3Q9BYB0 1731 aa21.36■■□□□ 1.01
MALAT1-211ENST00000617791 PPM1GO15355 546 aaPredicted RBP21.36■■□□□ 1.01
MALAT1-211ENST00000617791 EMILIN1Q9Y6C2 1016 aa21.36■■□□□ 1.01
MALAT1-211ENST00000617791 KIF24Q5T7B8 1368 aa21.36■■□□□ 1.01
MALAT1-211ENST00000617791 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
MALAT1-211ENST00000617791 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
MALAT1-211ENST00000617791 PCDH11XQ9BZA7 1347 aa21.33■■□□□ 1.01
MALAT1-211ENST00000617791 PCDH11YQ9BZA8 1340 aa21.33■■□□□ 1.01
MALAT1-211ENST00000617791 CLSPNQ9HAW4 1339 aa21.33■■□□□ 1.01
MALAT1-211ENST00000617791 POLD1P28340 1107 aa21.32■■□□□ 1
MALAT1-211ENST00000617791 KLHL34Q8N239 644 aa21.32■■□□□ 1
MALAT1-211ENST00000617791 SLC16A10Q8TF71 515 aa21.32■■□□□ 1
MALAT1-211ENST00000617791 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
MALAT1-211ENST00000617791 CYP27B1O15528 508 aa21.28■■□□□ 1
MALAT1-211ENST00000617791 LY75O60449 1722 aa21.28■■□□□ 1
MALAT1-211ENST00000617791 MAP3K5Q99683 1374 aa21.26■□□□□ 0.99
MALAT1-211ENST00000617791 TNNT2P45379 298 aaPredicted RBP21.26■□□□□ 0.99
MALAT1-211ENST00000617791 QSER1Q2KHR3 1735 aa21.26■□□□□ 0.99
MALAT1-211ENST00000617791 WASHC2AQ641Q2 1341 aa21.26■□□□□ 0.99
MALAT1-211ENST00000617791 SPG7Q9UQ90 795 aa21.25■□□□□ 0.99
MALAT1-211ENST00000617791 PALLDQ8WX93 1383 aa21.24■□□□□ 0.99
MALAT1-211ENST00000617791 EIF4G2P78344 907 aaKnown RBP eCLIP21.24■□□□□ 0.99
MALAT1-211ENST00000617791 TUBGCP6Q96RT7 1819 aa21.24■□□□□ 0.99
MALAT1-211ENST00000617791 GPR162Q16538 588 aa21.23■□□□□ 0.99
MALAT1-211ENST00000617791 COL23A1Q86Y22 540 aaPredicted RBP21.23■□□□□ 0.99
MALAT1-211ENST00000617791 EYA1Q99502 592 aa21.23■□□□□ 0.99
MALAT1-211ENST00000617791 POLKQ9UBT6 870 aa21.23■□□□□ 0.99
MALAT1-211ENST00000617791 UTRNP46939 3433 aa21.22■□□□□ 0.99
MALAT1-211ENST00000617791 HSPA5P11021 654 aaKnown RBP21.22■□□□□ 0.99
MALAT1-211ENST00000617791 PELP1Q8IZL8 1130 aaKnown RBP21.22■□□□□ 0.99
MALAT1-211ENST00000617791 CCER1Q8TC90 406 aaPredicted RBP21.22■□□□□ 0.99
MALAT1-211ENST00000617791 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
MALAT1-211ENST00000617791 ANKRD26Q9UPS8 1709 aa21.21■□□□□ 0.99
MALAT1-211ENST00000617791 NCAPD2Q15021 1401 aa21.21■□□□□ 0.99
MALAT1-211ENST00000617791 HMGB2P26583 209 aaKnown RBP21.2■□□□□ 0.98
MALAT1-211ENST00000617791 MSL1Q68DK7 614 aa21.2■□□□□ 0.98
MALAT1-211ENST00000617791 PKD1L3Q7Z443 1732 aa21.19■□□□□ 0.98
MALAT1-211ENST00000617791 PIGBQ92521 554 aa21.19■□□□□ 0.98
MALAT1-211ENST00000617791 PANK3Q9H999 370 aa21.19■□□□□ 0.98
MALAT1-211ENST00000617791 EIF4A2Q14240 407 aaKnown RBP21.18■□□□□ 0.98
MALAT1-211ENST00000617791 NKX1-1Q15270 411 aaPredicted RBP21.18■□□□□ 0.98
MALAT1-211ENST00000617791 ZNF784Q8NCA9 323 aaPredicted RBP21.18■□□□□ 0.98
MALAT1-211ENST00000617791 C5P01031 1676 aa21.18■□□□□ 0.98
MALAT1-211ENST00000617791 TOGARAM1Q9Y4F4 1720 aa21.18■□□□□ 0.98
MALAT1-211ENST00000617791 NLGN2Q8NFZ4 835 aa21.17■□□□□ 0.98
MALAT1-211ENST00000617791 AK7Q96M32 723 aa21.17■□□□□ 0.98
MALAT1-211ENST00000617791 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.17■□□□□ 0.98not detected■■□□□ 12.2
MALAT1-211ENST00000617791 TMOD3Q9NYL9 352 aa21.17■□□□□ 0.98
MALAT1-211ENST00000617791 MAP2P11137 1827 aaKnown RBP21.17■□□□□ 0.98
MALAT1-211ENST00000617791 FLAD1Q8NFF5 587 aa21.16■□□□□ 0.98
MALAT1-211ENST00000617791 COL24A1Q17RW2 1714 aa21.15■□□□□ 0.98
MALAT1-211ENST00000617791 IFNL2Q8IZJ0 200 aa21.15■□□□□ 0.98
MALAT1-211ENST00000617791 ITGB4P16144 1822 aa21.14■□□□□ 0.97
MALAT1-211ENST00000617791 PHKG2P15735 406 aa21.14■□□□□ 0.97
MALAT1-211ENST00000617791 PHF14O94880 888 aa21.13■□□□□ 0.97
MALAT1-211ENST00000617791 LOC102724428A0A0B4J2F2 783 aa21.12■□□□□ 0.97
MALAT1-211ENST00000617791 SIK1P57059 783 aa21.12■□□□□ 0.97
MALAT1-211ENST00000617791 ASAP1Q9ULH1 1129 aa21.12■□□□□ 0.97
MALAT1-211ENST00000617791 C4BP0C0L5 1744 aa21.12■□□□□ 0.97
MALAT1-211ENST00000617791 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
MALAT1-211ENST00000617791 MORC1Q86VD1 984 aa21.11■□□□□ 0.97
MALAT1-211ENST00000617791 AMIGO3Q86WK7 504 aa21.1■□□□□ 0.97
MALAT1-211ENST00000617791 LINC00116Q8NCU8 138 aa21.1■□□□□ 0.97
MALAT1-211ENST00000617791 TAF1LQ8IZX4 1826 aa21.1■□□□□ 0.97
MALAT1-211ENST00000617791 CHD4Q14839 1912 aa21.1■□□□□ 0.97
MALAT1-211ENST00000617791 IGSF1Q8N6C5 1336 aa21.09■□□□□ 0.97
MALAT1-211ENST00000617791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.09■□□□□ 0.97
MALAT1-211ENST00000617791 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
MALAT1-211ENST00000617791 ATP6V1AP38606 617 aa21.08■□□□□ 0.97
MALAT1-211ENST00000617791 KNSTRNQ9Y448 316 aa21.07■□□□□ 0.96
MALAT1-211ENST00000617791 GNPATO15228 680 aa21.06■□□□□ 0.96
MALAT1-211ENST00000617791 YBX3P16989 372 aaKnown RBP eCLIP21.06■□□□□ 0.96
MALAT1-211ENST00000617791 SSFA2P28290 1259 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms