RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 CFAP45Q9UL16 551 aa11.58□□□□□ -0.56
SHTN1-207ENST00000615301 SFPQP23246 707 aaKnown RBP eCLIP11.58□□□□□ -0.56
SHTN1-207ENST00000615301 GTF2F1P35269 517 aaKnown RBP eCLIP11.57□□□□□ -0.561e-7■□□□□ 9.1
SHTN1-207ENST00000615301 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
SHTN1-207ENST00000615301 CABP1Q9NZU7 370 aa11.57□□□□□ -0.56
SHTN1-207ENST00000615301 PPP6R1Q9UPN7 881 aa11.57□□□□□ -0.56
SHTN1-207ENST00000615301 TNPO1Q92973 898 aaKnown RBP11.57□□□□□ -0.56
SHTN1-207ENST00000615301 TBC1D2Q9BYX2 928 aa11.57□□□□□ -0.56
SHTN1-207ENST00000615301 CCDC113Q9H0I3 377 aa11.57□□□□□ -0.56
SHTN1-207ENST00000615301 RRS1Q15050 365 aaKnown RBP11.57□□□□□ -0.56
SHTN1-207ENST00000615301 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
SHTN1-207ENST00000615301 PPFIA3O75145 1194 aa11.56□□□□□ -0.56
SHTN1-207ENST00000615301 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
SHTN1-207ENST00000615301 CPLX3Q8WVH0 158 aa11.56□□□□□ -0.56
SHTN1-207ENST00000615301 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.56□□□□□ -0.563e-7■■□□□ 13.3
SHTN1-207ENST00000615301 LUC7LQ9NQ29 371 aaKnown RBP11.56□□□□□ -0.56
SHTN1-207ENST00000615301 SLC3A2P08195 630 aaKnown RBP11.56□□□□□ -0.56
SHTN1-207ENST00000615301 RBM27Q9P2N5 1060 aaKnown RBP11.56□□□□□ -0.56
SHTN1-207ENST00000615301 TXNDC2Q86VQ3 553 aa11.56□□□□□ -0.56
SHTN1-207ENST00000615301 IPO4Q8TEX9 1081 aaKnown RBP11.56□□□□□ -0.56
SHTN1-207ENST00000615301 TNNT1P13805 278 aa11.56□□□□□ -0.56
SHTN1-207ENST00000615301 CYB5RLQ6IPT4 315 aa11.56□□□□□ -0.56
SHTN1-207ENST00000615301 KIF6Q6ZMV9 814 aa11.56□□□□□ -0.56
SHTN1-207ENST00000615301 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
SHTN1-207ENST00000615301 CLIP2Q9UDT6 1046 aa11.56□□□□□ -0.56
SHTN1-207ENST00000615301 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 KRI1Q8N9T8 703 aaKnown RBP11.55□□□□□ -0.56
SHTN1-207ENST00000615301 ZSCAN31Q96LW9 406 aaPredicted RBP11.55□□□□□ -0.56
SHTN1-207ENST00000615301 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 WDR63Q8IWG1 891 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 KIF4BQ2VIQ3 1234 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 CCDC82Q8N4S0 544 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 ZBTB9Q96C00 473 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 NACAP1Q9BZK3 213 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 USP8P40818 1118 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 SSR1P43307 286 aaKnown RBP11.55□□□□□ -0.56
SHTN1-207ENST00000615301 ESCO1Q5FWF5 840 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 TICAM2Q86XR7 235 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 AFAP1Q8N556 730 aa11.55□□□□□ -0.56
SHTN1-207ENST00000615301 SMTNL1A8MU46 457 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 TDO2P48775 406 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 SLFN5Q08AF3 891 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 KIF18AQ8NI77 898 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 RAI14Q9P0K7 980 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 NOL7Q9UMY1 257 aaKnown RBP11.54□□□□□ -0.56
SHTN1-207ENST00000615301 ZRSR2Q15696 482 aaKnown RBP11.54□□□□□ -0.56
SHTN1-207ENST00000615301 SOGA3Q5TF21 947 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 ZNF530Q6P9A1 599 aaPredicted RBP11.54□□□□□ -0.56
SHTN1-207ENST00000615301 GIMAP7Q8NHV1 300 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 TAF4BQ92750 862 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 IDH1O75874 414 aaKnown RBP11.54□□□□□ -0.56
SHTN1-207ENST00000615301 CADPSQ9ULU8 1353 aa11.54□□□□□ -0.56
SHTN1-207ENST00000615301 BIN1O00499 593 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 CCDC183Q5T5S1 534 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 UBAC1Q9BSL1 405 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 ZSWIM4Q9H7M6 989 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 GOLGA6L10A0A0M3HER8 536 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 GPATCH11Q8N954 259 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 ZNF830Q96NB3 372 aaPredicted RBP11.53□□□□□ -0.56
SHTN1-207ENST00000615301 ZMYND15Q9H091 742 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 CCDC148Q8NFR7 591 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 TFIP11Q9UBB9 837 aaKnown RBP11.53□□□□□ -0.56
SHTN1-207ENST00000615301 ATF3P18847 181 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 RNF187Q5TA31 235 aaPredicted RBP11.53□□□□□ -0.56
SHTN1-207ENST00000615301 IQCEQ6IPM2 695 aa11.53□□□□□ -0.56
SHTN1-207ENST00000615301 CASQ1P31415 396 aa11.52□□□□□ -0.56
SHTN1-207ENST00000615301 TOP2AP11388 1531 aaKnown RBP11.52□□□□□ -0.56
SHTN1-207ENST00000615301 SHTN1A0MZ66 631 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 CCDC57Q2TAC2 916 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 ISM2Q6H9L7 571 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 DYDC1Q8WWB3 177 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 CDK19Q9BWU1 502 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 BCCIPQ9P287 314 aaKnown RBP eCLIP11.52□□□□□ -0.57
SHTN1-207ENST00000615301 MX1P20591 662 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 USP5P45974 858 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
SHTN1-207ENST00000615301 BOLA2Q9H3K6 86 aa11.52□□□□□ -0.57
SHTN1-207ENST00000615301 TOP1P11387 765 aaKnown RBP11.52□□□□□ -0.57
SHTN1-207ENST00000615301 ADCY5O95622 1261 aa11.51□□□□□ -0.57
SHTN1-207ENST00000615301 JAKMIP3Q5VZ66 844 aa11.51□□□□□ -0.57
SHTN1-207ENST00000615301 MCM10Q7L590 875 aa11.51□□□□□ -0.57
SHTN1-207ENST00000615301 CDKL5O76039 1030 aa11.51□□□□□ -0.57
SHTN1-207ENST00000615301 SSH1Q8WYL5 1049 aa11.51□□□□□ -0.57
SHTN1-207ENST00000615301 RPAP2Q8IXW5 612 aaPredicted RBP11.51□□□□□ -0.57
SHTN1-207ENST00000615301 MPHOSPH8Q99549 860 aa11.51□□□□□ -0.57
SHTN1-207ENST00000615301 GNL3LQ9NVN8 582 aaKnown RBP11.51□□□□□ -0.57
SHTN1-207ENST00000615301 LRRC9Q6ZRR7 1453 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 KIF5CO60282 957 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 CABP4P57796 275 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 F6X3S4 739 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 MAP2K1Q02750 393 aaPredicted RBP11.5□□□□□ -0.57
SHTN1-207ENST00000615301 ANO10Q9NW15 660 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 CEP126Q9P2H0 1117 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 ZSCAN12O43309 604 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 PANK2Q9BZ23 570 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 SMARCA2P51531 1590 aa11.5□□□□□ -0.57
SHTN1-207ENST00000615301 TMPOP42166 694 aaKnown RBP11.49□□□□□ -0.57
SHTN1-207ENST00000615301 TSHZ3Q63HK5 1081 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 ANKRD18AQ8IVF6 992 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 GOPCQ9HD26 462 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms