RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 TMEM87AQ8NBN3 555 aa8.34□□□□□ -1.07
ALMS1-207ENST00000614410 KIF7Q2M1P5 1343 aa8.34□□□□□ -1.08
ALMS1-207ENST00000614410 HIP1O00291 1037 aa8.34□□□□□ -1.08
ALMS1-207ENST00000614410 ATP2C2O75185 946 aa8.34□□□□□ -1.08
ALMS1-207ENST00000614410 MPHOSPH8Q99549 860 aa8.34□□□□□ -1.08
ALMS1-207ENST00000614410 PAIP2Q9BPZ3 127 aaKnown RBP8.34□□□□□ -1.08
ALMS1-207ENST00000614410 CGNQ9P2M7 1197 aaKnown RBP8.34□□□□□ -1.08
ALMS1-207ENST00000614410 VGFO15240 615 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 TERF1P54274 439 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 ZHX1Q9UKY1 873 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 APBB1IPQ7Z5R6 666 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 NUP62CLQ9H1M0 184 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 CUX2O14529 1486 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 TMCO4Q5TGY1 634 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 BLOC1S2Q6QNY1 142 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 JAKMIP1Q96N16 626 aaKnown RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 NLRP6P59044 892 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 ANKRD1Q15327 319 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 TXLNBQ8N3L3 684 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 HOMER2Q9NSB8 354 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 NUTM2BA6NNL0 878 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 NUTM2EB1AL46 878 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 NUTM2AQ8IVF1 878 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 K7ELQ4 463 aaPredicted RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 SLC4A2P04920 1241 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 CTNNA2P26232 953 aa8.33□□□□□ -1.08
ALMS1-207ENST00000614410 BMS1Q14692 1282 aaKnown RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 NOL7Q9UMY1 257 aaKnown RBP8.33□□□□□ -1.08
ALMS1-207ENST00000614410 CCDC96Q2M329 555 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 WDR33Q9C0J8 1336 aaKnown RBP8.32□□□□□ -1.08
ALMS1-207ENST00000614410 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 HOOK3Q86VS8 718 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 FAM107BQ9H098 131 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 SMTNL1A8MU46 457 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 NOP2P46087 812 aaKnown RBP8.32□□□□□ -1.08
ALMS1-207ENST00000614410 LRP2BPQ9P2M1 347 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 SPA17Q15506 151 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 POTEJP0CG39 1038 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 ZSWIM4Q9H7M6 989 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 LUZP1Q86V48 1076 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 SCLT1Q96NL6 688 aa8.32□□□□□ -1.08
ALMS1-207ENST00000614410 GTF2F1P35269 517 aaKnown RBP eCLIP8.31□□□□□ -1.08
ALMS1-207ENST00000614410 CETN2P41208 172 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 IL1RAPL2Q9NP60 686 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 GNL3LQ9NVN8 582 aaKnown RBP8.31□□□□□ -1.08
ALMS1-207ENST00000614410 CCDC144AA2RUR9 1427 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 MMRN2Q9H8L6 949 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 ADAMTS8Q9UP79 889 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 NACAP1Q9BZK3 213 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 USP47Q96K76 1375 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 KIF5CO60282 957 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 BICDL1Q6ZP65 573 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 ARL1P40616 181 aaPredicted RBP8.31□□□□□ -1.08
ALMS1-207ENST00000614410 UBAC1Q9BSL1 405 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 IMMTQ16891 758 aaKnown RBP8.31□□□□□ -1.08
ALMS1-207ENST00000614410 ESPNB1AK53 854 aa8.31□□□□□ -1.08
ALMS1-207ENST00000614410 EXOSC9Q06265 439 aaKnown RBP8.31□□□□□ -1.08
ALMS1-207ENST00000614410 SLC4A8Q2Y0W8 1093 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 SPTY2D1Q68D10 685 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 KIF18AQ8NI77 898 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 TRIM21P19474 475 aaKnown RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 PDRG1Q9NUG6 133 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 IDH1O75874 414 aaKnown RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 LMAN1P49257 510 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 SOGA1O94964 1423 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 FMN1Q68DA7 1419 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 GNAI3P08754 354 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 CCDC175P0C221 793 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 CASTP20810 708 aaKnown RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 MAP3K11Q16584 847 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 GCOM1H8Y6P7 765 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 ZWINTO95229 277 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 MYZAPP0CAP1 466 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 PAFAH1B1P43034 410 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 FERMT3Q86UX7 667 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 MKNK2Q9HBH9 465 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 RRP9O43818 475 aaKnown RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 CABP4P57796 275 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 FERMT2Q96AC1 680 aa8.3□□□□□ -1.08
ALMS1-207ENST00000614410 NUP88Q99567 741 aaPredicted RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 PUF60Q9UHX1 559 aaKnown RBP8.3□□□□□ -1.08
ALMS1-207ENST00000614410 PRKCSHP14314 528 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-207ENST00000614410 AACSQ86V21 672 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 MAP9Q49MG5 647 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 TDRD12Q587J7 1177 aaKnown RBP8.29□□□□□ -1.08
ALMS1-207ENST00000614410 CCDC83Q8IWF9 413 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 TWISTNBQ3B726 338 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-207ENST00000614410 C16orf45Q96MC5 204 aaPredicted RBP8.29□□□□□ -1.08
ALMS1-207ENST00000614410 CA8P35219 290 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 CTR9Q6PD62 1173 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 CCDC144CPQ8IYA2 1237 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 HDGFL1Q5TGJ6 251 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 ESCO1Q5FWF5 840 aa8.29□□□□□ -1.08
ALMS1-207ENST00000614410 SF3B2Q13435 895 aaKnown RBP8.28□□□□□ -1.08
ALMS1-207ENST00000614410 TIGD1Q96MW7 591 aa8.28□□□□□ -1.08
ALMS1-207ENST00000614410 TOP1P11387 765 aaKnown RBP8.28□□□□□ -1.08
ALMS1-207ENST00000614410 MNAT1P51948 309 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms