RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 A0A1W2PP64 1363 aa24.45■■□□□ 1.5
CSNK1E-215ENST00000612795 PRIM1P49642 420 aaKnown RBP24.45■■□□□ 1.5
CSNK1E-215ENST00000612795 IP6K1Q92551 441 aa24.45■■□□□ 1.5
CSNK1E-215ENST00000612795 TERF2IPQ9NYB0 399 aa24.45■■□□□ 1.5
CSNK1E-215ENST00000612795 C5P01031 1676 aa24.45■■□□□ 1.5
CSNK1E-215ENST00000612795 MSH5O43196 834 aa24.44■■□□□ 1.5
CSNK1E-215ENST00000612795 SLC12A5Q9H2X9 1139 aa24.44■■□□□ 1.5
CSNK1E-215ENST00000612795 CCNL1Q9UK58 526 aaPredicted RBP24.43■■□□□ 1.5
CSNK1E-215ENST00000612795 NSD2O96028 1365 aa24.42■■□□□ 1.5
CSNK1E-215ENST00000612795 GRIN3BO60391 1043 aa24.42■■□□□ 1.5
CSNK1E-215ENST00000612795 CARD11Q9BXL7 1154 aa24.41■■□□□ 1.5
CSNK1E-215ENST00000612795 YBX3P16989 372 aaKnown RBP eCLIP24.4■■□□□ 1.53e-7■□□□□ 10.1
CSNK1E-215ENST00000612795 IFFO2Q5TF58 517 aa24.4■■□□□ 1.5
CSNK1E-215ENST00000612795 USP47Q96K76 1375 aa24.4■■□□□ 1.5
CSNK1E-215ENST00000612795 MEGF6O75095 1541 aa24.4■■□□□ 1.5
CSNK1E-215ENST00000612795 TAF1LQ8IZX4 1826 aa24.4■■□□□ 1.5
CSNK1E-215ENST00000612795 ZCRB1Q8TBF4 217 aaKnown RBP24.38■■□□□ 1.49
CSNK1E-215ENST00000612795 AMPHP49418 695 aa24.37■■□□□ 1.49
CSNK1E-215ENST00000612795 ATP10DQ9P241 1426 aa24.36■■□□□ 1.49
CSNK1E-215ENST00000612795 HOXC9P31274 260 aa24.36■■□□□ 1.49
CSNK1E-215ENST00000612795 MSL1Q68DK7 614 aa24.36■■□□□ 1.49
CSNK1E-215ENST00000612795 COG3Q96JB2 828 aa24.36■■□□□ 1.49
CSNK1E-215ENST00000612795 MAP3K19Q56UN5 1328 aa24.35■■□□□ 1.49
CSNK1E-215ENST00000612795 COL23A1Q86Y22 540 aaPredicted RBP24.35■■□□□ 1.49
CSNK1E-215ENST00000612795 CEP350Q5VT06 3117 aa24.32■■□□□ 1.48
CSNK1E-215ENST00000612795 RTL1A6NKG5 1358 aa24.31■■□□□ 1.48
CSNK1E-215ENST00000612795 ITGB4P16144 1822 aa24.31■■□□□ 1.48
CSNK1E-215ENST00000612795 SMG6Q86US8 1419 aaKnown RBP24.3■■□□□ 1.48
CSNK1E-215ENST00000612795 PUS7Q96PZ0 661 aaKnown RBP24.3■■□□□ 1.48
CSNK1E-215ENST00000612795 GPBP1L1Q9HC44 474 aaPredicted RBP24.3■■□□□ 1.48
CSNK1E-215ENST00000612795 C4BP0C0L5 1744 aa24.29■■□□□ 1.48
CSNK1E-215ENST00000612795 FBLN1P23142 703 aa24.28■■□□□ 1.48
CSNK1E-215ENST00000612795 RAPGEF4Q8WZA2 1011 aa24.28■■□□□ 1.48
CSNK1E-215ENST00000612795 CD2APQ9Y5K6 639 aa24.28■■□□□ 1.48
CSNK1E-215ENST00000612795 CGNL1Q0VF96 1302 aa24.28■■□□□ 1.48
CSNK1E-215ENST00000612795 KIF20BQ96Q89 1820 aa24.27■■□□□ 1.48
CSNK1E-215ENST00000612795 UBR3Q6ZT12 1888 aa24.27■■□□□ 1.48
CSNK1E-215ENST00000612795 TOGARAM1Q9Y4F4 1720 aa24.27■■□□□ 1.48
CSNK1E-215ENST00000612795 HMGB2P26583 209 aaKnown RBP24.26■■□□□ 1.47
CSNK1E-215ENST00000612795 USHBP1Q8N6Y0 703 aa24.26■■□□□ 1.47
CSNK1E-215ENST00000612795 FLAD1Q8NFF5 587 aa24.26■■□□□ 1.47
CSNK1E-215ENST00000612795 PALLDQ8WX93 1383 aa24.26■■□□□ 1.47
CSNK1E-215ENST00000612795 NBPF6Q5VWK0 638 aa24.25■■□□□ 1.47
CSNK1E-215ENST00000612795 NBPF4Q96M43 638 aa24.25■■□□□ 1.47
CSNK1E-215ENST00000612795 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
CSNK1E-215ENST00000612795 RRS1Q15050 365 aaKnown RBP24.24■■□□□ 1.47
CSNK1E-215ENST00000612795 ZNF526Q8TF50 670 aaPredicted RBP24.24■■□□□ 1.47
CSNK1E-215ENST00000612795 PCDH11XQ9BZA7 1347 aa24.24■■□□□ 1.47
CSNK1E-215ENST00000612795 PCDH11YQ9BZA8 1340 aa24.24■■□□□ 1.47
CSNK1E-215ENST00000612795 ADCY9O60503 1353 aa24.24■■□□□ 1.47
CSNK1E-215ENST00000612795 PKD1L3Q7Z443 1732 aa24.21■■□□□ 1.47
CSNK1E-215ENST00000612795 TONSLQ96HA7 1378 aa24.21■■□□□ 1.47
CSNK1E-215ENST00000612795 MPRIPQ6WCQ1 1025 aa24.21■■□□□ 1.47
CSNK1E-215ENST00000612795 AK7Q96M32 723 aa24.21■■□□□ 1.47
CSNK1E-215ENST00000612795 HSPA6P17066 643 aa24.2■■□□□ 1.46
CSNK1E-215ENST00000612795 NSD3Q9BZ95 1437 aa24.19■■□□□ 1.46
CSNK1E-215ENST00000612795 IGSF1Q8N6C5 1336 aa24.18■■□□□ 1.46
CSNK1E-215ENST00000612795 WWC3Q9ULE0 1092 aa24.18■■□□□ 1.46
CSNK1E-215ENST00000612795 PHF14O94880 888 aa24.17■■□□□ 1.46
CSNK1E-215ENST00000612795 TESK2Q96S53 571 aa24.17■■□□□ 1.46
CSNK1E-215ENST00000612795 SMARCC1Q92922 1105 aaPredicted RBP24.16■■□□□ 1.46
CSNK1E-215ENST00000612795 GGNBP2Q9H3C7 697 aa24.16■■□□□ 1.46
CSNK1E-215ENST00000612795 MAP2P11137 1827 aaKnown RBP24.15■■□□□ 1.46
CSNK1E-215ENST00000612795 ST20-MTHFSA0A0A6YYL1 179 aa24.15■■□□□ 1.46
CSNK1E-215ENST00000612795 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
CSNK1E-215ENST00000612795 INSRP06213 1382 aa24.15■■□□□ 1.46
CSNK1E-215ENST00000612795 FLT4P35916 1363 aa24.15■■□□□ 1.46
CSNK1E-215ENST00000612795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.12■■□□□ 1.45
CSNK1E-215ENST00000612795 FYB1O15117 783 aa24.12■■□□□ 1.45
CSNK1E-215ENST00000612795 HSP90AB2PQ58FF8 381 aa24.12■■□□□ 1.45
CSNK1E-215ENST00000612795 CICQ96RK0 1608 aaPredicted RBP24.12■■□□□ 1.45
CSNK1E-215ENST00000612795 CYP27B1O15528 508 aa24.11■■□□□ 1.45
CSNK1E-215ENST00000612795 AMIGO3Q86WK7 504 aa24.11■■□□□ 1.45
CSNK1E-215ENST00000612795 KIF24Q5T7B8 1368 aa24.11■■□□□ 1.45
CSNK1E-215ENST00000612795 KIF13BQ9NQT8 1826 aa24.1■■□□□ 1.45
CSNK1E-215ENST00000612795 N4BP2Q86UW6 1770 aaPredicted RBP24.09■■□□□ 1.45
CSNK1E-215ENST00000612795 SSFA2P28290 1259 aa24.09■■□□□ 1.45
CSNK1E-215ENST00000612795 SMIM5Q71RC9 77 aa24.08■■□□□ 1.45
CSNK1E-215ENST00000612795 ANKRD26Q9UPS8 1709 aa24.07■■□□□ 1.44
CSNK1E-215ENST00000612795 KIAA1551Q9HCM1 1747 aa24.07■■□□□ 1.44
CSNK1E-215ENST00000612795 PIGBQ92521 554 aa24.06■■□□□ 1.44
CSNK1E-215ENST00000612795 LOC102724428A0A0B4J2F2 783 aa24.05■■□□□ 1.44
CSNK1E-215ENST00000612795 KIF3CO14782 793 aa24.05■■□□□ 1.44
CSNK1E-215ENST00000612795 SIK1P57059 783 aa24.05■■□□□ 1.44
CSNK1E-215ENST00000612795 LINC00116Q8NCU8 138 aa24.05■■□□□ 1.44
CSNK1E-215ENST00000612795 GNPATO15228 680 aa24.04■■□□□ 1.44
CSNK1E-215ENST00000612795 TMF1P82094 1093 aa24.04■■□□□ 1.44
CSNK1E-215ENST00000612795 TMOD3Q9NYL9 352 aa24.03■■□□□ 1.44
CSNK1E-215ENST00000612795 SPG7Q9UQ90 795 aa24.03■■□□□ 1.44
CSNK1E-215ENST00000612795 NCAPD2Q15021 1401 aa24.01■■□□□ 1.43
CSNK1E-215ENST00000612795 PXDNLA1KZ92 1463 aa24.01■■□□□ 1.43
CSNK1E-215ENST00000612795 EMILIN1Q9Y6C2 1016 aa24.01■■□□□ 1.43
CSNK1E-215ENST00000612795 BRCA1P38398 1863 aaKnown RBP24■■□□□ 1.43
CSNK1E-215ENST00000612795 NKX1-1Q15270 411 aaPredicted RBP24■■□□□ 1.43
CSNK1E-215ENST00000612795 PPM1GO15355 546 aaPredicted RBP23.99■■□□□ 1.43
CSNK1E-215ENST00000612795 MMP10P09238 476 aa23.99■■□□□ 1.43
CSNK1E-215ENST00000612795 ATP6V1AP38606 617 aa23.99■■□□□ 1.43
CSNK1E-215ENST00000612795 APLP1P51693 650 aa23.99■■□□□ 1.43
CSNK1E-215ENST00000612795 WDR90Q96KV7 1748 aa23.98■■□□□ 1.43
CSNK1E-215ENST00000612795 COL5A3P25940 1745 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms