RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 WWC3Q9ULE0 1092 aa14.9□□□□□ -0.02
SSX3-204ENST00000612497 LTN1O94822 1766 aa14.89□□□□□ -0.03
SSX3-204ENST00000612497 EVC2Q86UK5 1308 aa14.89□□□□□ -0.03
SSX3-204ENST00000612497 COL13A1Q5TAT6 717 aaPredicted RBP14.88□□□□□ -0.03
SSX3-204ENST00000612497 ANKRD36BQ8N2N9 1353 aa14.87□□□□□ -0.03
SSX3-204ENST00000612497 DOT1LQ8TEK3 1739 aa14.87□□□□□ -0.03
SSX3-204ENST00000612497 KTN1Q86UP2 1357 aaKnown RBP14.86□□□□□ -0.03
SSX3-204ENST00000612497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.86□□□□□ -0.03
SSX3-204ENST00000612497 IGSF1Q8N6C5 1336 aa14.86□□□□□ -0.03
SSX3-204ENST00000612497 TOMM70O94826 608 aa14.85□□□□□ -0.03
SSX3-204ENST00000612497 NSD2O96028 1365 aa14.84□□□□□ -0.03
SSX3-204ENST00000612497 TNS4Q8IZW8 715 aa14.83□□□□□ -0.04
SSX3-204ENST00000612497 FLAD1Q8NFF5 587 aa14.83□□□□□ -0.04
SSX3-204ENST00000612497 LTV1Q96GA3 475 aaPredicted RBP14.83□□□□□ -0.04
SSX3-204ENST00000612497 USP47Q96K76 1375 aa14.83□□□□□ -0.04
SSX3-204ENST00000612497 NME9Q86XW9 330 aa14.82□□□□□ -0.04
SSX3-204ENST00000612497 WDR90Q96KV7 1748 aa14.82□□□□□ -0.04
SSX3-204ENST00000612497 USP31Q70CQ4 1352 aa14.82□□□□□ -0.04
SSX3-204ENST00000612497 C5P01031 1676 aa14.81□□□□□ -0.04
SSX3-204ENST00000612497 MON2Q7Z3U7 1717 aa14.81□□□□□ -0.04
SSX3-204ENST00000612497 PRELPP51888 382 aa14.81□□□□□ -0.04
SSX3-204ENST00000612497 KLRG1Q96E93 195 aa14.8□□□□□ -0.04
SSX3-204ENST00000612497 HTRA3P83110 453 aa14.79□□□□□ -0.04
SSX3-204ENST00000612497 USP54Q70EL1 1684 aa14.79□□□□□ -0.04
SSX3-204ENST00000612497 ZCRB1Q8TBF4 217 aaKnown RBP14.79□□□□□ -0.04
SSX3-204ENST00000612497 TAF1LQ8IZX4 1826 aa14.78□□□□□ -0.04
SSX3-204ENST00000612497 FAM208AQ9UK61 1670 aaKnown RBP14.78□□□□□ -0.04
SSX3-204ENST00000612497 HMGB2P26583 209 aaKnown RBP14.78□□□□□ -0.04
SSX3-204ENST00000612497 NMRK2Q9NPI5 230 aa14.78□□□□□ -0.04
SSX3-204ENST00000612497 PCNTO95613 3336 aa14.77□□□□□ -0.04
SSX3-204ENST00000612497 JMYQ8N9B5 988 aa14.77□□□□□ -0.05
SSX3-204ENST00000612497 IP6K1Q92551 441 aa14.77□□□□□ -0.05
SSX3-204ENST00000612497 C16orf71Q8IYS4 520 aaPredicted RBP14.76□□□□□ -0.05
SSX3-204ENST00000612497 AK7Q96M32 723 aa14.76□□□□□ -0.05
SSX3-204ENST00000612497 CICQ96RK0 1608 aaPredicted RBP14.75□□□□□ -0.05
SSX3-204ENST00000612497 PHF14O94880 888 aa14.75□□□□□ -0.05
SSX3-204ENST00000612497 RBM46Q8TBY0 533 aaKnown RBP14.75□□□□□ -0.05
SSX3-204ENST00000612497 RGPD2P0DJD1 1756 aa14.75□□□□□ -0.05
SSX3-204ENST00000612497 SBNO2Q9Y2G9 1366 aa14.74□□□□□ -0.05
SSX3-204ENST00000612497 C4BP0C0L5 1744 aa14.74□□□□□ -0.05
SSX3-204ENST00000612497 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
SSX3-204ENST00000612497 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.73□□□□□ -0.05
SSX3-204ENST00000612497 ARHGAP27Q6ZUM4 889 aa14.73□□□□□ -0.05
SSX3-204ENST00000612497 SMIM5Q71RC9 77 aa14.73□□□□□ -0.05
SSX3-204ENST00000612497 AMIGO3Q86WK7 504 aa14.73□□□□□ -0.05
SSX3-204ENST00000612497 MEGF6O75095 1541 aa14.72□□□□□ -0.05
SSX3-204ENST00000612497 UBR3Q6ZT12 1888 aa14.72□□□□□ -0.05
SSX3-204ENST00000612497 HDGFL2Q7Z4V5 671 aaPredicted RBP14.72□□□□□ -0.05
SSX3-204ENST00000612497 TMC1Q8TDI8 760 aa14.72□□□□□ -0.05
SSX3-204ENST00000612497 BCS1LQ9Y276 419 aa14.72□□□□□ -0.05
SSX3-204ENST00000612497 FSTL1Q12841 308 aa14.71□□□□□ -0.05
SSX3-204ENST00000612497 MPRIPQ6WCQ1 1025 aa14.71□□□□□ -0.05
SSX3-204ENST00000612497 TOGARAM1Q9Y4F4 1720 aa14.71□□□□□ -0.05
SSX3-204ENST00000612497 N4BP2Q86UW6 1770 aaPredicted RBP14.7□□□□□ -0.06
SSX3-204ENST00000612497 NSD3Q9BZ95 1437 aa14.7□□□□□ -0.06
SSX3-204ENST00000612497 AMPHP49418 695 aa14.7□□□□□ -0.06
SSX3-204ENST00000612497 CD163L1Q9NR16 1453 aa14.69□□□□□ -0.06
SSX3-204ENST00000612497 HOXC9P31274 260 aa14.69□□□□□ -0.06
SSX3-204ENST00000612497 EDC4Q6P2E9 1401 aaKnown RBP14.68□□□□□ -0.06
SSX3-204ENST00000612497 A0A0G2JLW4 131 aa14.68□□□□□ -0.06
SSX3-204ENST00000612497 SSFA2P28290 1259 aa14.68□□□□□ -0.06
SSX3-204ENST00000612497 RAPGEF4Q8WZA2 1011 aa14.68□□□□□ -0.06
SSX3-204ENST00000612497 SMARCC1Q92922 1105 aaPredicted RBP14.68□□□□□ -0.06
SSX3-204ENST00000612497 SLC12A5Q9H2X9 1139 aa14.68□□□□□ -0.06
SSX3-204ENST00000612497 PXDNLA1KZ92 1463 aa14.68□□□□□ -0.06
SSX3-204ENST00000612497 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
SSX3-204ENST00000612497 MAP3K19Q56UN5 1328 aa14.67□□□□□ -0.06
SSX3-204ENST00000612497 MMP10P09238 476 aa14.67□□□□□ -0.06
SSX3-204ENST00000612497 TGFB2P61812 414 aa14.67□□□□□ -0.06
SSX3-204ENST00000612497 C9orf131Q5VYM1 1079 aa14.67□□□□□ -0.06
SSX3-204ENST00000612497 USHBP1Q8N6Y0 703 aa14.67□□□□□ -0.06
SSX3-204ENST00000612497 ROCK2O75116 1388 aaKnown RBP14.67□□□□□ -0.06
SSX3-204ENST00000612497 ITGB4P16144 1822 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 KIF13BQ9NQT8 1826 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 FCHSD2O94868 740 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 NBPF6Q5VWK0 638 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 NBPF4Q96M43 638 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 TERF2IPQ9NYB0 399 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 KIAA1551Q9HCM1 1747 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 KDM2BQ8NHM5 1336 aa14.66□□□□□ -0.06
SSX3-204ENST00000612497 PLEKHG2Q9H7P9 1386 aa14.65□□□□□ -0.06
SSX3-204ENST00000612497 HSPA1AP0DMV8 641 aaKnown RBP14.65□□□□□ -0.06
SSX3-204ENST00000612497 HSPA1BP0DMV9 641 aaKnown RBP14.65□□□□□ -0.06
SSX3-204ENST00000612497 TATP17735 454 aaPredicted RBP14.65□□□□□ -0.06
SSX3-204ENST00000612497 FBLN1P23142 703 aa14.65□□□□□ -0.06
SSX3-204ENST00000612497 L3MBTL2Q969R5 705 aa14.65□□□□□ -0.06
SSX3-204ENST00000612497 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
SSX3-204ENST00000612497 PCDH11XQ9BZA7 1347 aa14.65□□□□□ -0.06
SSX3-204ENST00000612497 PCDH11YQ9BZA8 1340 aa14.65□□□□□ -0.06
SSX3-204ENST00000612497 GNPATO15228 680 aa14.64□□□□□ -0.07
SSX3-204ENST00000612497 LINC00116Q8NCU8 138 aa14.64□□□□□ -0.07
SSX3-204ENST00000612497 COG3Q96JB2 828 aa14.64□□□□□ -0.07
SSX3-204ENST00000612497 KCPQ6ZWJ8 1503 aa14.64□□□□□ -0.07
SSX3-204ENST00000612497 A0A1W2PP64 1363 aa14.63□□□□□ -0.07
SSX3-204ENST00000612497 DPEP1P16444 411 aa14.63□□□□□ -0.07
SSX3-204ENST00000612497 SMC1BQ8NDV3 1235 aa14.63□□□□□ -0.07
SSX3-204ENST00000612497 LOC102724428A0A0B4J2F2 783 aa14.62□□□□□ -0.07
SSX3-204ENST00000612497 SLC34A2O95436 690 aa14.62□□□□□ -0.07
SSX3-204ENST00000612497 SIK1P57059 783 aa14.62□□□□□ -0.07
SSX3-204ENST00000612497 PKD1L3Q7Z443 1732 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms