RNA–Protein interactions for RNA: ENST00000612478.4

R3HCC1L-205, Transcript of R3H domain and coiled-coil containing 1 like, humanhuman

TSL 5 BASIC

Gene R3HCC1L, Length 3,337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1L-205ENST00000612478 CFAP53Q96M91 514 aa5.68□□□□□ -1.5
R3HCC1L-205ENST00000612478 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.68□□□□□ -1.5
R3HCC1L-205ENST00000612478 SHANK3Q9BYB0 1731 aa5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 FOXO3O43524 673 aa5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 GCP02774 474 aa5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 TERF1P54274 439 aa5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 ABTB2Q8N961 1025 aa5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 PRDM4Q9UKN5 801 aa5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 CCDC146Q8IYE0 955 aa5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 N4BP2Q86UW6 1770 aaPredicted RBP5.67□□□□□ -1.5
R3HCC1L-205ENST00000612478 MRC1P22897 1456 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 CRB1P82279 1406 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 IGSF1Q8N6C5 1336 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 POLKQ9UBT6 870 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 SIPA1L3O60292 1781 aaPredicted RBP5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 ZNF521Q96K83 1311 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 NLRP6P59044 892 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 ISY1Q9ULR0 285 aaKnown RBP5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 PAPPAQ13219 1627 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 CALD1Q05682 793 aaKnown RBP5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 WDR43Q15061 677 aaKnown RBP eCLIP5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 BARGINQ6ZT62 677 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 EXOC6Q8TAG9 804 aa5.66□□□□□ -1.5
R3HCC1L-205ENST00000612478 GLI3P10071 1580 aa5.65□□□□□ -1.5
R3HCC1L-205ENST00000612478 HTATSF1O43719 755 aaKnown RBP5.65□□□□□ -1.5
R3HCC1L-205ENST00000612478 HMGB2P26583 209 aaKnown RBP5.65□□□□□ -1.5
R3HCC1L-205ENST00000612478 EMILIN1Q9Y6C2 1016 aa5.65□□□□□ -1.5
R3HCC1L-205ENST00000612478 MAP3K19Q56UN5 1328 aa5.65□□□□□ -1.51
R3HCC1L-205ENST00000612478 WDR17Q8IZU2 1322 aa5.65□□□□□ -1.51
R3HCC1L-205ENST00000612478 ONECUT3O60422 494 aaPredicted RBP5.65□□□□□ -1.51
R3HCC1L-205ENST00000612478 HOXC9P31274 260 aa5.65□□□□□ -1.51
R3HCC1L-205ENST00000612478 L1TD1Q5T7N2 865 aaKnown RBP5.65□□□□□ -1.51
R3HCC1L-205ENST00000612478 SCN11AQ9UI33 1791 aa5.65□□□□□ -1.51
R3HCC1L-205ENST00000612478 BCL9LQ86UU0 1499 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 IL13P35225 146 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 RRS1Q15050 365 aaKnown RBP5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 CCDC27Q2M243 656 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 TRMT2AQ8IZ69 625 aaKnown RBP5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 CARD10Q9BWT7 1032 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 ERBB3P21860 1342 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 FCHSD2O94868 740 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 VPS72Q15906 364 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 FAM161AQ3B820 660 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 CENPQQ7L2Z9 268 aaPredicted RBP5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 CDCA7LQ96GN5 454 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 BABAM1Q9NWV8 329 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 RCAN3Q9UKA8 241 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 SOX12O15370 315 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 RGPD2P0DJD1 1756 aa5.64□□□□□ -1.51
R3HCC1L-205ENST00000612478 XPCQ01831 940 aaPredicted RBP5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 MAPK8IP2Q13387 824 aaPredicted RBP5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 NUTM2GQ5VZR2 741 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 KIAA0232Q92628 1395 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 NHSQ6T4R5 1651 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 RREB1Q92766 1687 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 TNS2Q63HR2 1409 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 APAF1O14727 1248 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 DDIT3P35638 169 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 SOS1Q07889 1333 aaPredicted RBP5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 DIAPH1O60610 1272 aaKnown RBP5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 HSPA1LP34931 641 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 PDCL3Q9H2J4 239 aa5.63□□□□□ -1.51
R3HCC1L-205ENST00000612478 UBR2Q8IWV8 1755 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 FRAT2O75474 233 aaPredicted RBP5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 AMOTQ4VCS5 1084 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 ZNF772Q68DY9 489 aaPredicted RBP5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 RRP7AQ9Y3A4 280 aaKnown RBP5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 DLG5Q8TDM6 1919 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 SPATA31A5Q5VU36 1347 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 SPATA31A7Q8IWB4 1347 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 KDM3BQ7LBC6 1761 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 IBTKQ9P2D0 1353 aaPredicted RBP5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 U2AF1L5P0DN76 240 aaPredicted RBP5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 U2AF1Q01081 240 aaKnown RBP eCLIP5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 UNC5CLQ8IV45 518 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 DDX17Q92841 729 aaKnown RBP5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 IL16Q14005 1332 aa5.62□□□□□ -1.51
R3HCC1L-205ENST00000612478 U2SURPO15042 1029 aaKnown RBP5.61□□□□□ -1.51
R3HCC1L-205ENST00000612478 TPM2P07951 284 aa5.61□□□□□ -1.51
R3HCC1L-205ENST00000612478 NKX1-1Q15270 411 aaPredicted RBP5.61□□□□□ -1.51
R3HCC1L-205ENST00000612478 SPINK5Q9NQ38 1064 aaPredicted RBP5.61□□□□□ -1.51
R3HCC1L-205ENST00000612478 XRCC6P12956 609 aaKnown RBP eCLIP5.61□□□□□ -1.51
R3HCC1L-205ENST00000612478 EIF4A2Q14240 407 aaKnown RBP5.61□□□□□ -1.51
R3HCC1L-205ENST00000612478 PLEKHF1Q96S99 279 aa5.61□□□□□ -1.51
R3HCC1L-205ENST00000612478 SPATA31A1Q5TZJ5 1347 aa5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 SBF2Q86WG5 1849 aa5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 LMOD3Q0VAK6 560 aa5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 HSP90AB1P08238 724 aaKnown RBP5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 AMPHP49418 695 aa5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 HSP90AA2PQ14568 343 aaPredicted RBP5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 NEUROD2Q15784 382 aa5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 TCP11L2Q8N4U5 519 aa5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 TRPC5Q9UL62 973 aaPredicted RBP5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 LAMB4A4D0S4 1761 aa5.6□□□□□ -1.51
R3HCC1L-205ENST00000612478 FAM83GA6ND36 823 aa5.59□□□□□ -1.51
R3HCC1L-205ENST00000612478 HMOX1P09601 288 aa5.59□□□□□ -1.51
R3HCC1L-205ENST00000612478 HSP90AB2PQ58FF8 381 aa5.59□□□□□ -1.51
R3HCC1L-205ENST00000612478 RUNDC1Q96C34 613 aa5.59□□□□□ -1.51
R3HCC1L-205ENST00000612478 PRDM11Q9NQV5 511 aa5.59□□□□□ -1.51
R3HCC1L-205ENST00000612478 CACNA1FO60840 1977 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms