RNA–Protein interactions for RNA: ENST00000611127.4

FAM228B-205, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene FAM228B, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-205ENST00000611127 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
FAM228B-205ENST00000611127 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
FAM228B-205ENST00000611127 AFAP1Q8N556 730 aa12.2□□□□□ -0.46
FAM228B-205ENST00000611127 FAM174AQ8TBP5 190 aa12.19□□□□□ -0.46
FAM228B-205ENST00000611127 WASF2Q9Y6W5 498 aa12.19□□□□□ -0.46
FAM228B-205ENST00000611127 MTUS2Q5JR59 1369 aa12.18□□□□□ -0.46
FAM228B-205ENST00000611127 ZMYM4Q5VZL5 1548 aa12.18□□□□□ -0.46
FAM228B-205ENST00000611127 NBPF14Q5TI25 921 aa12.18□□□□□ -0.46
FAM228B-205ENST00000611127 PPP2R2DQ66LE6 453 aa12.18□□□□□ -0.46
FAM228B-205ENST00000611127 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
FAM228B-205ENST00000611127 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
FAM228B-205ENST00000611127 HPS1Q92902 700 aa12.17□□□□□ -0.46
FAM228B-205ENST00000611127 GPKOWQ92917 476 aaPredicted RBP eCLIP12.17□□□□□ -0.46
FAM228B-205ENST00000611127 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.17□□□□□ -0.46
FAM228B-205ENST00000611127 GOPCQ9HD26 462 aa12.17□□□□□ -0.46
FAM228B-205ENST00000611127 YEATS2Q9ULM3 1422 aa12.17□□□□□ -0.46
FAM228B-205ENST00000611127 LRRIQ1Q96JM4 1722 aa12.17□□□□□ -0.46
FAM228B-205ENST00000611127 ZFYVE16Q7Z3T8 1539 aa12.16□□□□□ -0.46
FAM228B-205ENST00000611127 ARHGEF40Q8TER5 1519 aa12.16□□□□□ -0.46
FAM228B-205ENST00000611127 CFDP1Q9UEE9 299 aaPredicted RBP12.16□□□□□ -0.46
FAM228B-205ENST00000611127 ZNF777Q9ULD5 760 aaPredicted RBP12.16□□□□□ -0.46
FAM228B-205ENST00000611127 RICTORQ6R327 1708 aa12.16□□□□□ -0.46
FAM228B-205ENST00000611127 MYO5CQ9NQX4 1742 aa12.16□□□□□ -0.46
FAM228B-205ENST00000611127 ATP10AO60312 1499 aa12.15□□□□□ -0.46
FAM228B-205ENST00000611127 CCNB3Q8WWL7 1395 aa12.15□□□□□ -0.46
FAM228B-205ENST00000611127 SENP2Q9HC62 589 aa12.14□□□□□ -0.47
FAM228B-205ENST00000611127 GPATCH8Q9UKJ3 1502 aaKnown RBP12.14□□□□□ -0.47
FAM228B-205ENST00000611127 ATP13A2Q9NQ11 1180 aa12.13□□□□□ -0.47
FAM228B-205ENST00000611127 PTPRMP28827 1452 aa12.13□□□□□ -0.47
FAM228B-205ENST00000611127 C9orf84Q5VXU9 1444 aa12.12□□□□□ -0.47
FAM228B-205ENST00000611127 TRAPPC8Q9Y2L5 1435 aa12.12□□□□□ -0.47
FAM228B-205ENST00000611127 POTECB2RU33 542 aa12.12□□□□□ -0.47
FAM228B-205ENST00000611127 MLECQ14165 292 aa12.12□□□□□ -0.47
FAM228B-205ENST00000611127 CDK15Q96Q40 435 aa12.12□□□□□ -0.47
FAM228B-205ENST00000611127 MLH3Q9UHC1 1453 aa12.12□□□□□ -0.47
FAM228B-205ENST00000611127 ADAMTSL3P82987 1691 aa12.11□□□□□ -0.47
FAM228B-205ENST00000611127 HNRNPMP52272 730 aaKnown RBP eCLIP12.11□□□□□ -0.47
FAM228B-205ENST00000611127 AGERQ15109 404 aa12.11□□□□□ -0.47
FAM228B-205ENST00000611127 DACH1Q9UI36 760 aa12.11□□□□□ -0.47
FAM228B-205ENST00000611127 PREX2Q70Z35 1606 aa12.11□□□□□ -0.47
FAM228B-205ENST00000611127 ARHGEF12Q9NZN5 1544 aa12.11□□□□□ -0.47
FAM228B-205ENST00000611127 KIAA1107Q9UPP5 1409 aa12.11□□□□□ -0.47
FAM228B-205ENST00000611127 KDM5CP41229 1560 aa12.1□□□□□ -0.47
FAM228B-205ENST00000611127 C11orf95C9JLR9 678 aaPredicted RBP12.1□□□□□ -0.47
FAM228B-205ENST00000611127 PROCA1Q8NCQ7 364 aaPredicted RBP12.1□□□□□ -0.47
FAM228B-205ENST00000611127 FOXJ1Q92949 421 aa12.1□□□□□ -0.47
FAM228B-205ENST00000611127 KIFC2Q96AC6 838 aa12.1□□□□□ -0.47
FAM228B-205ENST00000611127 TLL2Q9Y6L7 1015 aa12.1□□□□□ -0.47
FAM228B-205ENST00000611127 ABCC1P33527 1531 aa12.1□□□□□ -0.47
FAM228B-205ENST00000611127 VPS8Q8N3P4 1428 aa12.1□□□□□ -0.47
FAM228B-205ENST00000611127 PLEKHH2Q8IVE3 1493 aa12.09□□□□□ -0.47
FAM228B-205ENST00000611127 BCORL1Q5H9F3 1711 aa12.09□□□□□ -0.47
FAM228B-205ENST00000611127 CDC42BPBQ9Y5S2 1711 aa12.09□□□□□ -0.47
FAM228B-205ENST00000611127 ADH1CP00326 375 aa12.09□□□□□ -0.47
FAM228B-205ENST00000611127 CTDSPL2Q05D32 466 aa12.09□□□□□ -0.47
FAM228B-205ENST00000611127 NEUROD2Q15784 382 aa12.09□□□□□ -0.47
FAM228B-205ENST00000611127 GMPR2Q9P2T1 348 aaKnown RBP12.09□□□□□ -0.47
FAM228B-205ENST00000611127 SPAG9O60271 1321 aaKnown RBP12.09□□□□□ -0.47
FAM228B-205ENST00000611127 ZC3H4Q9UPT8 1303 aaKnown RBP12.09□□□□□ -0.47
FAM228B-205ENST00000611127 EHBP1L1Q8N3D4 1523 aa12.08□□□□□ -0.48
FAM228B-205ENST00000611127 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
FAM228B-205ENST00000611127 CAPN5O15484 640 aaPredicted RBP12.07□□□□□ -0.48
FAM228B-205ENST00000611127 SH3RF1Q7Z6J0 888 aa12.07□□□□□ -0.48
FAM228B-205ENST00000611127 PNMA1Q8ND90 353 aa12.07□□□□□ -0.48
FAM228B-205ENST00000611127 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
FAM228B-205ENST00000611127 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
FAM228B-205ENST00000611127 HECW2Q9P2P5 1572 aa12.06□□□□□ -0.48
FAM228B-205ENST00000611127 NR5A1Q13285 461 aa12.06□□□□□ -0.48
FAM228B-205ENST00000611127 NNTQ13423 1086 aa12.06□□□□□ -0.48
FAM228B-205ENST00000611127 SH3BP5LQ7L8J4 393 aa12.06□□□□□ -0.48
FAM228B-205ENST00000611127 PCMTD1Q96MG8 357 aaPredicted RBP12.06□□□□□ -0.48
FAM228B-205ENST00000611127 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
FAM228B-205ENST00000611127 ZNF644Q9H582 1327 aaPredicted RBP12.06□□□□□ -0.48
FAM228B-205ENST00000611127 TRMT44Q8IYL2 757 aaKnown RBP12.05□□□□□ -0.48
FAM228B-205ENST00000611127 MAP4K5Q9Y4K4 846 aa12.05□□□□□ -0.48
FAM228B-205ENST00000611127 CDC42BPAQ5VT25 1732 aa12.05□□□□□ -0.48
FAM228B-205ENST00000611127 SAMD9LQ8IVG5 1584 aa12.05□□□□□ -0.48
FAM228B-205ENST00000611127 NCOA2Q15596 1464 aa12.04□□□□□ -0.48
FAM228B-205ENST00000611127 PDXDC2PQ6P474 469 aa12.04□□□□□ -0.48
FAM228B-205ENST00000611127 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
FAM228B-205ENST00000611127 FKBPLQ9UIM3 349 aa12.04□□□□□ -0.48
FAM228B-205ENST00000611127 SYCP2Q9BX26 1530 aa12.04□□□□□ -0.48
FAM228B-205ENST00000611127 LRRC9Q6ZRR7 1453 aa12.03□□□□□ -0.48
FAM228B-205ENST00000611127 C4orf48Q5BLP8 95 aa12.03□□□□□ -0.48
FAM228B-205ENST00000611127 TIAM1Q13009 1591 aa12.03□□□□□ -0.48
FAM228B-205ENST00000611127 REREQ9P2R6 1566 aa12.03□□□□□ -0.48
FAM228B-205ENST00000611127 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
FAM228B-205ENST00000611127 MAP3K1Q13233 1512 aa12.02□□□□□ -0.48
FAM228B-205ENST00000611127 AP1G2O75843 785 aa12.02□□□□□ -0.49
FAM228B-205ENST00000611127 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
FAM228B-205ENST00000611127 GPSM3Q9Y4H4 160 aa12.02□□□□□ -0.49
FAM228B-205ENST00000611127 ITSN2Q9NZM3 1697 aa12.02□□□□□ -0.49
FAM228B-205ENST00000611127 AGLP35573 1532 aa12.01□□□□□ -0.49
FAM228B-205ENST00000611127 SIGLEC1Q9BZZ2 1709 aa12.01□□□□□ -0.49
FAM228B-205ENST00000611127 ARID5BQ14865 1188 aa12.01□□□□□ -0.49
FAM228B-205ENST00000611127 TMEM259Q4ZIN3 620 aa12.01□□□□□ -0.49
FAM228B-205ENST00000611127 LRRN4Q8WUT4 740 aa12.01□□□□□ -0.49
FAM228B-205ENST00000611127 MBD5Q9P267 1494 aa12.01□□□□□ -0.49
FAM228B-205ENST00000611127 RFC5P40937 340 aa12□□□□□ -0.49
FAM228B-205ENST00000611127 CEBPAP49715 358 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms