RNA–Protein interactions for RNA: ENST00000610970.1

HOXA4-204, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-204ENST00000610970 RTF1Q92541 710 aaKnown RBP30■■■□□ 2.39
HOXA4-204ENST00000610970 RTL1A6NKG5 1358 aa30■■■□□ 2.39
HOXA4-204ENST00000610970 SOX12O15370 315 aa29.99■■■□□ 2.39
HOXA4-204ENST00000610970 EYA1Q99502 592 aa29.99■■■□□ 2.39
HOXA4-204ENST00000610970 MCM10Q7L590 875 aa29.98■■■□□ 2.39
HOXA4-204ENST00000610970 PHF8Q9UPP1 1060 aa29.98■■■□□ 2.39
HOXA4-204ENST00000610970 PTPRCP08575 1304 aa29.97■■■□□ 2.39
HOXA4-204ENST00000610970 SEC24BO95487 1268 aa29.96■■■□□ 2.39
HOXA4-204ENST00000610970 MTHFSDQ2M296 383 aaKnown RBP29.96■■■□□ 2.39
HOXA4-204ENST00000610970 INTS3Q68E01 1043 aaKnown RBP29.96■■■□□ 2.39
HOXA4-204ENST00000610970 NPHP4O75161 1426 aaPredicted RBP29.96■■■□□ 2.39
HOXA4-204ENST00000610970 ADGRL3Q9HAR2 1447 aa29.96■■■□□ 2.39
HOXA4-204ENST00000610970 HOXC9P31274 260 aa29.96■■■□□ 2.39
HOXA4-204ENST00000610970 ABTB2Q8N961 1025 aa29.96■■■□□ 2.39
HOXA4-204ENST00000610970 BECN1Q14457 450 aa29.94■■■□□ 2.38
HOXA4-204ENST00000610970 CHD1LQ86WJ1 897 aa29.93■■■□□ 2.38
HOXA4-204ENST00000610970 TBC1D32Q96NH3 1257 aa29.93■■■□□ 2.38
HOXA4-204ENST00000610970 SOS1Q07889 1333 aaPredicted RBP29.91■■■□□ 2.38
HOXA4-204ENST00000610970 LRRC37A3O60309 1634 aa29.91■■■□□ 2.38
HOXA4-204ENST00000610970 BABAM1Q9NWV8 329 aa29.91■■■□□ 2.38
HOXA4-204ENST00000610970 NWD1Q149M9 1564 aa29.9■■■□□ 2.38
HOXA4-204ENST00000610970 TSPYL4Q9UJ04 414 aa29.87■■■□□ 2.37
HOXA4-204ENST00000610970 RGS12O14924 1447 aa29.87■■■□□ 2.37
HOXA4-204ENST00000610970 GNAT3A8MTJ3 354 aa29.85■■■□□ 2.37
HOXA4-204ENST00000610970 SLC4A3P48751 1232 aa29.85■■■□□ 2.37
HOXA4-204ENST00000610970 KCNH5Q8NCM2 988 aa29.85■■■□□ 2.37
HOXA4-204ENST00000610970 PHRF1Q9P1Y6 1649 aaKnown RBP29.84■■■□□ 2.37
HOXA4-204ENST00000610970 FOXO3O43524 673 aa29.84■■■□□ 2.37
HOXA4-204ENST00000610970 IP6K1Q92551 441 aa29.84■■■□□ 2.37
HOXA4-204ENST00000610970 LTN1O94822 1766 aa29.84■■■□□ 2.37
HOXA4-204ENST00000610970 LNPKQ9C0E8 428 aa29.83■■■□□ 2.37
HOXA4-204ENST00000610970 NFAT5O94916 1531 aa29.83■■■□□ 2.37
HOXA4-204ENST00000610970 BMP2KLQ5H9B9 411 aa29.82■■■□□ 2.36
HOXA4-204ENST00000610970 SIRT2Q8IXJ6 389 aa29.82■■■□□ 2.36
HOXA4-204ENST00000610970 RPAP2Q8IXW5 612 aaPredicted RBP29.82■■■□□ 2.36
HOXA4-204ENST00000610970 KRT24Q2M2I5 525 aa29.82■■■□□ 2.36
HOXA4-204ENST00000610970 ANKRD45Q5TZF3 282 aa29.82■■■□□ 2.36
HOXA4-204ENST00000610970 NUTM2GQ5VZR2 741 aa29.82■■■□□ 2.36
HOXA4-204ENST00000610970 MAP3K5Q99683 1374 aa29.81■■■□□ 2.36
HOXA4-204ENST00000610970 PSME1Q06323 249 aa29.81■■■□□ 2.36
HOXA4-204ENST00000610970 C1orf115Q9H7X2 142 aa29.8■■■□□ 2.36
HOXA4-204ENST00000610970 SLC4A2P04920 1241 aa29.79■■■□□ 2.36
HOXA4-204ENST00000610970 EIF5BO60841 1220 aaKnown RBP29.78■■■□□ 2.36
HOXA4-204ENST00000610970 DEKP35659 375 aaKnown RBP29.78■■■□□ 2.36
HOXA4-204ENST00000610970 C14orf37Q86TY3 774 aa29.78■■■□□ 2.36
HOXA4-204ENST00000610970 ANKRD44Q8N8A2 993 aa29.78■■■□□ 2.36
HOXA4-204ENST00000610970 DCTPP1Q9H773 170 aa29.78■■■□□ 2.36
HOXA4-204ENST00000610970 ESCO1Q5FWF5 840 aa29.77■■■□□ 2.36
HOXA4-204ENST00000610970 C22orf23Q9BZE7 217 aa29.76■■■□□ 2.36
HOXA4-204ENST00000610970 CACNA1FO60840 1977 aa29.76■■■□□ 2.35
HOXA4-204ENST00000610970 CCT4P50991 539 aaKnown RBP29.76■■■□□ 2.35
HOXA4-204ENST00000610970 STK31Q9BXU1 1019 aa29.75■■■□□ 2.35
HOXA4-204ENST00000610970 TAF7Q15545 349 aaPredicted RBP29.74■■■□□ 2.35
HOXA4-204ENST00000610970 CCDC30Q5VVM6 783 aa29.74■■■□□ 2.35
HOXA4-204ENST00000610970 MIS18AQ9NYP9 233 aa29.74■■■□□ 2.35
HOXA4-204ENST00000610970 ATP10DQ9P241 1426 aa29.73■■■□□ 2.35
HOXA4-204ENST00000610970 MSH6P52701 1360 aa29.73■■■□□ 2.35
HOXA4-204ENST00000610970 NFKBIBQ15653 356 aa29.71■■■□□ 2.35
HOXA4-204ENST00000610970 SLIT3O75094 1523 aa29.71■■■□□ 2.35
HOXA4-204ENST00000610970 MFAP1P55081 439 aaKnown RBP29.71■■■□□ 2.35
HOXA4-204ENST00000610970 IL17REQ8NFR9 667 aa29.71■■■□□ 2.35
HOXA4-204ENST00000610970 CHMP4AQ9BY43 222 aa29.71■■■□□ 2.35
HOXA4-204ENST00000610970 LTV1Q96GA3 475 aaPredicted RBP29.7■■■□□ 2.34
HOXA4-204ENST00000610970 KIF1AQ12756 1690 aa29.7■■■□□ 2.34
HOXA4-204ENST00000610970 FAM208AQ9UK61 1670 aaKnown RBP29.7■■■□□ 2.34
HOXA4-204ENST00000610970 CEP85Q6P2H3 762 aa29.69■■■□□ 2.34
HOXA4-204ENST00000610970 RBM25P49756 843 aaKnown RBP29.68■■■□□ 2.34
HOXA4-204ENST00000610970 CEMIPQ8WUJ3 1361 aa29.67■■■□□ 2.34
HOXA4-204ENST00000610970 HMMRO75330 724 aa29.67■■■□□ 2.34
HOXA4-204ENST00000610970 MST1RQ04912 1400 aa29.65■■■□□ 2.34
HOXA4-204ENST00000610970 TBC1D2Q9BYX2 928 aa29.65■■■□□ 2.34
HOXA4-204ENST00000610970 MED1Q15648 1581 aaPredicted RBP29.65■■■□□ 2.34
HOXA4-204ENST00000610970 NCAPD2Q15021 1401 aa29.64■■■□□ 2.34
HOXA4-204ENST00000610970 RBM33Q96EV2 1170 aaKnown RBP29.64■■■□□ 2.34
HOXA4-204ENST00000610970 N4BP2Q86UW6 1770 aaPredicted RBP29.64■■■□□ 2.33
HOXA4-204ENST00000610970 TRPM3Q9HCF6 1732 aaPredicted RBP29.63■■■□□ 2.33
HOXA4-204ENST00000610970 G2E3Q7L622 706 aa29.63■■■□□ 2.33
HOXA4-204ENST00000610970 MEIS3Q99687 375 aa29.63■■■□□ 2.33
HOXA4-204ENST00000610970 LMO7Q8WWI1 1683 aa29.63■■■□□ 2.33
HOXA4-204ENST00000610970 PXDNLA1KZ92 1463 aa29.63■■■□□ 2.33
HOXA4-204ENST00000610970 NBPF6Q5VWK0 638 aa29.62■■■□□ 2.33
HOXA4-204ENST00000610970 NBPF4Q96M43 638 aa29.62■■■□□ 2.33
HOXA4-204ENST00000610970 HOXB7P09629 217 aa29.62■■■□□ 2.33
HOXA4-204ENST00000610970 ARHGEF25Q86VW2 580 aa29.62■■■□□ 2.33
HOXA4-204ENST00000610970 GCP02774 474 aa29.61■■■□□ 2.33
HOXA4-204ENST00000610970 FLIIQ13045 1269 aa29.61■■■□□ 2.33
HOXA4-204ENST00000610970 AMOTQ4VCS5 1084 aa29.61■■■□□ 2.33
HOXA4-204ENST00000610970 PROSER2Q86WR7 435 aaPredicted RBP29.61■■■□□ 2.33
HOXA4-204ENST00000610970 PLEKHM2Q8IWE5 1019 aa29.61■■■□□ 2.33
HOXA4-204ENST00000610970 ZNF335Q9H4Z2 1342 aaPredicted RBP29.61■■■□□ 2.33
HOXA4-204ENST00000610970 GNAI3P08754 354 aa29.6■■■□□ 2.33
HOXA4-204ENST00000610970 PLEKHO1Q53GL0 409 aaPredicted RBP29.6■■■□□ 2.33
HOXA4-204ENST00000610970 CERKQ8TCT0 537 aa29.6■■■□□ 2.33
HOXA4-204ENST00000610970 ORAI2Q96SN7 254 aa29.59■■■□□ 2.33
HOXA4-204ENST00000610970 STRCP1A6NGW2 1772 aa29.59■■■□□ 2.33
HOXA4-204ENST00000610970 OVOS2A0A0G2JMS6 1433 aa29.59■■■□□ 2.33
HOXA4-204ENST00000610970 CDC45O75419 566 aa29.59■■■□□ 2.33
HOXA4-204ENST00000610970 USHBP1Q8N6Y0 703 aa29.59■■■□□ 2.33
HOXA4-204ENST00000610970 C19orf44Q9H6X5 657 aa29.59■■■□□ 2.33
HOXA4-204ENST00000610970 LTBP4Q8N2S1 1624 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms