RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 SMC5Q8IY18 1101 aa15.13■□□□□ 0.01
USP6NL-206ENST00000609853 LTN1O94822 1766 aa15.13■□□□□ 0.01
USP6NL-206ENST00000609853 PSME1Q06323 249 aa15.12■□□□□ 0.01
USP6NL-206ENST00000609853 DCTN1Q14203 1278 aa15.12■□□□□ 0.01
USP6NL-206ENST00000609853 MTHFSDQ2M296 383 aaKnown RBP15.12■□□□□ 0.01
USP6NL-206ENST00000609853 BABAM1Q9NWV8 329 aa15.12■□□□□ 0.01
USP6NL-206ENST00000609853 NFAT5O94916 1531 aa15.11■□□□□ 0.01
USP6NL-206ENST00000609853 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
USP6NL-206ENST00000609853 ESCO1Q5FWF5 840 aa15.11■□□□□ 0.01
USP6NL-206ENST00000609853 MCM10Q7L590 875 aa15.11■□□□□ 0.01
USP6NL-206ENST00000609853 SOS1Q07889 1333 aaPredicted RBP15.11■□□□□ 0.01
USP6NL-206ENST00000609853 KIF1AQ12756 1690 aa15.1■□□□□ 0.01
USP6NL-206ENST00000609853 ELL2O00472 640 aaPredicted RBP15.1■□□□□ 0.01
USP6NL-206ENST00000609853 IP6K1Q92551 441 aa15.1■□□□□ 0.01
USP6NL-206ENST00000609853 PTPRCP08575 1304 aa15.1■□□□□ 0.01
USP6NL-206ENST00000609853 LRRC37A3O60309 1634 aa15.1■□□□□ 0.01
USP6NL-206ENST00000609853 C14orf37Q86TY3 774 aa15.09■□□□□ 0.01
USP6NL-206ENST00000609853 CACNA1FO60840 1977 aa15.09■□□□□ 0.01
USP6NL-206ENST00000609853 GNAT3A8MTJ3 354 aa15.08■□□□□ 0
USP6NL-206ENST00000609853 GCC1Q96CN9 775 aa15.08■□□□□ 0
USP6NL-206ENST00000609853 NCOA3Q9Y6Q9 1424 aa15.07■□□□□ 0
USP6NL-206ENST00000609853 NUTM2GQ5VZR2 741 aa15.07■□□□□ 0
USP6NL-206ENST00000609853 INTS3Q68E01 1043 aaKnown RBP15.07■□□□□ 0
USP6NL-206ENST00000609853 C19orf44Q9H6X5 657 aa15.06■□□□□ 0
USP6NL-206ENST00000609853 SLIT3O75094 1523 aa15.06■□□□□ 0
USP6NL-206ENST00000609853 MST1RQ04912 1400 aa15.06■□□□□ 0
USP6NL-206ENST00000609853 MAP3K5Q99683 1374 aa15.06■□□□□ 0
USP6NL-206ENST00000609853 NUCB1Q02818 461 aa15.06■□□□□ 0
USP6NL-206ENST00000609853 PROSER2Q86WR7 435 aaPredicted RBP15.06■□□□□ 0
USP6NL-206ENST00000609853 TSPYL4Q9UJ04 414 aa15.06■□□□□ 0
USP6NL-206ENST00000609853 UPF2Q9HAU5 1272 aaKnown RBP15.05■□□□□ -0
USP6NL-206ENST00000609853 FOXO3O43524 673 aa15.04■□□□□ -0
USP6NL-206ENST00000609853 DAXXQ9UER7 740 aaPredicted RBP15.04■□□□□ -0
USP6NL-206ENST00000609853 TRPM3Q9HCF6 1732 aaPredicted RBP15.04■□□□□ -0
USP6NL-206ENST00000609853 DCCP43146 1447 aa15.04■□□□□ -0
USP6NL-206ENST00000609853 CHMP4AQ9BY43 222 aa15.03■□□□□ -0
USP6NL-206ENST00000609853 RBM33Q96EV2 1170 aaKnown RBP15.03■□□□□ -0
USP6NL-206ENST00000609853 USP19O94966 1318 aa15.02■□□□□ -0
USP6NL-206ENST00000609853 C1orf167Q5SNV9 1468 aa15.02■□□□□ -0
USP6NL-206ENST00000609853 RGS12O14924 1447 aa15.02□□□□□ -0.01
USP6NL-206ENST00000609853 GCP02774 474 aa15.01□□□□□ -0.01
USP6NL-206ENST00000609853 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
USP6NL-206ENST00000609853 CHD1LQ86WJ1 897 aa15.01□□□□□ -0.01
USP6NL-206ENST00000609853 ORAI2Q96SN7 254 aa15.01□□□□□ -0.01
USP6NL-206ENST00000609853 NCAPD2Q15021 1401 aa15.01□□□□□ -0.01
USP6NL-206ENST00000609853 ARHGEF25Q86VW2 580 aa15□□□□□ -0.01
USP6NL-206ENST00000609853 LTV1Q96GA3 475 aaPredicted RBP15□□□□□ -0.01
USP6NL-206ENST00000609853 MSH6P52701 1360 aa15□□□□□ -0.01
USP6NL-206ENST00000609853 SLC4A2P04920 1241 aa15□□□□□ -0.01
USP6NL-206ENST00000609853 KRT24Q2M2I5 525 aa15□□□□□ -0.01
USP6NL-206ENST00000609853 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
USP6NL-206ENST00000609853 RPAP2Q8IXW5 612 aaPredicted RBP15□□□□□ -0.01
USP6NL-206ENST00000609853 STK31Q9BXU1 1019 aa15□□□□□ -0.01
USP6NL-206ENST00000609853 CCT4P50991 539 aaKnown RBP14.99□□□□□ -0.01
USP6NL-206ENST00000609853 AMOTQ4VCS5 1084 aa14.99□□□□□ -0.01
USP6NL-206ENST00000609853 KRT28Q7Z3Y7 464 aa14.99□□□□□ -0.01
USP6NL-206ENST00000609853 CEMIPQ8WUJ3 1361 aa14.99□□□□□ -0.01
USP6NL-206ENST00000609853 LMO7Q8WWI1 1683 aa14.98□□□□□ -0.01
USP6NL-206ENST00000609853 ATF3P18847 181 aa14.98□□□□□ -0.01
USP6NL-206ENST00000609853 NBPF6Q5VWK0 638 aa14.98□□□□□ -0.01
USP6NL-206ENST00000609853 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
USP6NL-206ENST00000609853 NBPF4Q96M43 638 aa14.98□□□□□ -0.01
USP6NL-206ENST00000609853 ALS2Q96Q42 1657 aa14.98□□□□□ -0.01
USP6NL-206ENST00000609853 CAMTA1Q9Y6Y1 1673 aa14.98□□□□□ -0.01
USP6NL-206ENST00000609853 PLEKHO1Q53GL0 409 aaPredicted RBP14.97□□□□□ -0.01
USP6NL-206ENST00000609853 MIS18AQ9NYP9 233 aa14.97□□□□□ -0.01
USP6NL-206ENST00000609853 OVOS2A0A0G2JMS6 1433 aa14.97□□□□□ -0.01
USP6NL-206ENST00000609853 FAM208AQ9UK61 1670 aaKnown RBP14.97□□□□□ -0.01
USP6NL-206ENST00000609853 MED1Q15648 1581 aaPredicted RBP14.97□□□□□ -0.01
USP6NL-206ENST00000609853 EIF5BO60841 1220 aaKnown RBP14.97□□□□□ -0.01
USP6NL-206ENST00000609853 SIRT2Q8IXJ6 389 aa14.97□□□□□ -0.01
USP6NL-206ENST00000609853 ANKRD44Q8N8A2 993 aa14.97□□□□□ -0.01
USP6NL-206ENST00000609853 TBC1D32Q96NH3 1257 aa14.97□□□□□ -0.01
USP6NL-206ENST00000609853 LMTK3Q96Q04 1460 aa14.96□□□□□ -0.01
USP6NL-206ENST00000609853 HOXB7P09629 217 aa14.96□□□□□ -0.01
USP6NL-206ENST00000609853 BECN1Q14457 450 aa14.96□□□□□ -0.01
USP6NL-206ENST00000609853 BMP2KLQ5H9B9 411 aa14.96□□□□□ -0.01
USP6NL-206ENST00000609853 AKAP4Q5JQC9 854 aa14.96□□□□□ -0.01
USP6NL-206ENST00000609853 DCTPP1Q9H773 170 aa14.96□□□□□ -0.01
USP6NL-206ENST00000609853 RGPD2P0DJD1 1756 aa14.96□□□□□ -0.02
USP6NL-206ENST00000609853 SEC24BO95487 1268 aa14.95□□□□□ -0.02
USP6NL-206ENST00000609853 ANKRD45Q5TZF3 282 aa14.95□□□□□ -0.02
USP6NL-206ENST00000609853 LNPKQ9C0E8 428 aa14.95□□□□□ -0.02
USP6NL-206ENST00000609853 USP35Q9P2H5 1018 aa14.95□□□□□ -0.02
USP6NL-206ENST00000609853 N4BP2Q86UW6 1770 aaPredicted RBP14.95□□□□□ -0.02
USP6NL-206ENST00000609853 PLEKHG2Q9H7P9 1386 aa14.95□□□□□ -0.02
USP6NL-206ENST00000609853 CADPS2Q86UW7 1296 aa14.95□□□□□ -0.02
USP6NL-206ENST00000609853 C1orf115Q9H7X2 142 aa14.95□□□□□ -0.02
USP6NL-206ENST00000609853 TMEM94Q12767 1356 aa14.94□□□□□ -0.02
USP6NL-206ENST00000609853 ATP10DQ9P241 1426 aa14.94□□□□□ -0.02
USP6NL-206ENST00000609853 USHBP1Q8N6Y0 703 aa14.94□□□□□ -0.02
USP6NL-206ENST00000609853 ABCC6O95255 1503 aa14.94□□□□□ -0.02
USP6NL-206ENST00000609853 KDM3BQ7LBC6 1761 aa14.93□□□□□ -0.02
USP6NL-206ENST00000609853 PXDNLA1KZ92 1463 aa14.93□□□□□ -0.02
USP6NL-206ENST00000609853 HMMRO75330 724 aa14.93□□□□□ -0.02
USP6NL-206ENST00000609853 STRCP1A6NGW2 1772 aa14.93□□□□□ -0.02
USP6NL-206ENST00000609853 FLIIQ13045 1269 aa14.92□□□□□ -0.02
USP6NL-206ENST00000609853 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
USP6NL-206ENST00000609853 RTL5Q5HYW3 569 aaPredicted RBP14.92□□□□□ -0.02
USP6NL-206ENST00000609853 CEP85Q6P2H3 762 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms