RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
PRDM16-210ENST00000607632 PTF1AQ7RTS3 328 aa19.6■□□□□ 0.73
PRDM16-210ENST00000607632 PPM1GO15355 546 aaPredicted RBP19.59■□□□□ 0.73
PRDM16-210ENST00000607632 TNNT2P45379 298 aaPredicted RBP19.59■□□□□ 0.73
PRDM16-210ENST00000607632 USHBP1Q8N6Y0 703 aa19.59■□□□□ 0.73
PRDM16-210ENST00000607632 EIF4A2Q14240 407 aaKnown RBP19.58■□□□□ 0.72
PRDM16-210ENST00000607632 ZCRB1Q8TBF4 217 aaKnown RBP19.58■□□□□ 0.72
PRDM16-210ENST00000607632 EYA1Q99502 592 aa19.58■□□□□ 0.72
PRDM16-210ENST00000607632 DOT1LQ8TEK3 1739 aa19.57■□□□□ 0.72
PRDM16-210ENST00000607632 RAPGEF4Q8WZA2 1011 aa19.57■□□□□ 0.72
PRDM16-210ENST00000607632 BTAF1O14981 1849 aa19.57■□□□□ 0.72
PRDM16-210ENST00000607632 IGSF1Q8N6C5 1336 aa19.56■□□□□ 0.72
PRDM16-210ENST00000607632 TATP17735 454 aaPredicted RBP19.56■□□□□ 0.72
PRDM16-210ENST00000607632 KCNQ2O43526 872 aa19.55■□□□□ 0.72
PRDM16-210ENST00000607632 DDX54Q8TDD1 881 aaKnown RBP19.54■□□□□ 0.72
PRDM16-210ENST00000607632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.53■□□□□ 0.72
PRDM16-210ENST00000607632 PCDH11XQ9BZA7 1347 aa19.52■□□□□ 0.72
PRDM16-210ENST00000607632 PCDH11YQ9BZA8 1340 aa19.52■□□□□ 0.72
PRDM16-210ENST00000607632 PROM2Q8N271 834 aa19.52■□□□□ 0.72
PRDM16-210ENST00000607632 ACSBG1Q96GR2 724 aa19.52■□□□□ 0.72
PRDM16-210ENST00000607632 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
PRDM16-210ENST00000607632 KDRP35968 1356 aa19.5■□□□□ 0.71
PRDM16-210ENST00000607632 CYP27B1O15528 508 aa19.5■□□□□ 0.71
PRDM16-210ENST00000607632 PAPPAQ13219 1627 aa19.5■□□□□ 0.71
PRDM16-210ENST00000607632 IL13P35225 146 aa19.49■□□□□ 0.71
PRDM16-210ENST00000607632 CC2D1BQ5T0F9 858 aaKnown RBP19.49■□□□□ 0.71
PRDM16-210ENST00000607632 LRP5O75197 1615 aa19.49■□□□□ 0.71
PRDM16-210ENST00000607632 COL3A1P02461 1466 aaPredicted RBP19.48■□□□□ 0.71
PRDM16-210ENST00000607632 LY75O60449 1722 aa19.48■□□□□ 0.71
PRDM16-210ENST00000607632 MTHFSP49914 203 aa19.48■□□□□ 0.71
PRDM16-210ENST00000607632 NKX1-1Q15270 411 aaPredicted RBP19.48■□□□□ 0.71
PRDM16-210ENST00000607632 TXNRD1Q16881 649 aa19.47■□□□□ 0.71
PRDM16-210ENST00000607632 KAT6BQ8WYB5 2073 aa19.47■□□□□ 0.71
PRDM16-210ENST00000607632 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
PRDM16-210ENST00000607632 ITGB4P16144 1822 aa19.46■□□□□ 0.71
PRDM16-210ENST00000607632 PSDA5PKW4 1024 aaPredicted RBP19.45■□□□□ 0.7
PRDM16-210ENST00000607632 PRIM1P49642 420 aaKnown RBP19.45■□□□□ 0.7
PRDM16-210ENST00000607632 R3HDM1Q15032 1099 aaKnown RBP19.45■□□□□ 0.7
PRDM16-210ENST00000607632 NBPF14Q5TI25 921 aa19.44■□□□□ 0.7
PRDM16-210ENST00000607632 ANO8Q9HCE9 1232 aaPredicted RBP19.43■□□□□ 0.7
PRDM16-210ENST00000607632 CASZ1Q86V15 1759 aa19.42■□□□□ 0.7
PRDM16-210ENST00000607632 PHKG2P15735 406 aa19.42■□□□□ 0.7
PRDM16-210ENST00000607632 AEBP1Q8IUX7 1158 aa19.41■□□□□ 0.7
PRDM16-210ENST00000607632 IFNL2Q8IZJ0 200 aa19.41■□□□□ 0.7
PRDM16-210ENST00000607632 QSER1Q2KHR3 1735 aa19.39■□□□□ 0.7
PRDM16-210ENST00000607632 AMOTQ4VCS5 1084 aa19.39■□□□□ 0.69
PRDM16-210ENST00000607632 SLC27A3Q5K4L6 730 aa19.39■□□□□ 0.69
PRDM16-210ENST00000607632 SULT6B1Q6IMI4 303 aa19.39■□□□□ 0.69
PRDM16-210ENST00000607632 LRRC4BQ9NT99 713 aa19.39■□□□□ 0.69
PRDM16-210ENST00000607632 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
PRDM16-210ENST00000607632 PLEKHO1Q53GL0 409 aaPredicted RBP19.38■□□□□ 0.69
PRDM16-210ENST00000607632 SYTL4Q96C24 671 aaPredicted RBP19.38■□□□□ 0.69
PRDM16-210ENST00000607632 ZEB1P37275 1124 aaPredicted RBP19.37■□□□□ 0.69
PRDM16-210ENST00000607632 PPP2R1AP30153 589 aa19.36■□□□□ 0.69
PRDM16-210ENST00000607632 SLC15A2Q16348 729 aa19.36■□□□□ 0.69
PRDM16-210ENST00000607632 KDM6AO15550 1401 aaPredicted RBP19.35■□□□□ 0.69
PRDM16-210ENST00000607632 ADAMTS7Q9UKP4 1686 aa19.35■□□□□ 0.69
PRDM16-210ENST00000607632 TAF1LQ8IZX4 1826 aa19.35■□□□□ 0.69
PRDM16-210ENST00000607632 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
PRDM16-210ENST00000607632 PIGBQ92521 554 aa19.34■□□□□ 0.69
PRDM16-210ENST00000607632 STK32BQ9NY57 414 aa19.34■□□□□ 0.69
PRDM16-210ENST00000607632 SCN11AQ9UI33 1791 aa19.34■□□□□ 0.69
PRDM16-210ENST00000607632 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.68
PRDM16-210ENST00000607632 AKT1S1Q96B36 256 aa19.33■□□□□ 0.68
PRDM16-210ENST00000607632 DCAF5Q96JK2 942 aa19.33■□□□□ 0.68
PRDM16-210ENST00000607632 C5P01031 1676 aa19.33■□□□□ 0.68
PRDM16-210ENST00000607632 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
PRDM16-210ENST00000607632 TUBGCP6Q96RT7 1819 aa19.32■□□□□ 0.68
PRDM16-210ENST00000607632 ERVV-2B6SEH9 535 aa19.32■□□□□ 0.68
PRDM16-210ENST00000607632 ZNF530Q6P9A1 599 aaPredicted RBP19.32■□□□□ 0.68
PRDM16-210ENST00000607632 ZNF831Q5JPB2 1677 aa19.32■□□□□ 0.68
PRDM16-210ENST00000607632 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
PRDM16-210ENST00000607632 ZNF827Q17R98 1081 aa19.31■□□□□ 0.68
PRDM16-210ENST00000607632 SMARCC1Q92922 1105 aaPredicted RBP19.31■□□□□ 0.68
PRDM16-210ENST00000607632 HMOX1P09601 288 aa19.3■□□□□ 0.68
PRDM16-210ENST00000607632 CFAP53Q96M91 514 aa19.3■□□□□ 0.68
PRDM16-210ENST00000607632 VIRMAQ69YN4 1812 aaKnown RBP19.3■□□□□ 0.68
PRDM16-210ENST00000607632 MRC1P22897 1456 aa19.29■□□□□ 0.68
PRDM16-210ENST00000607632 COL24A1Q17RW2 1714 aa19.29■□□□□ 0.68
PRDM16-210ENST00000607632 TMOD3Q9NYL9 352 aa19.29■□□□□ 0.68
PRDM16-210ENST00000607632 CCNL1Q9UK58 526 aaPredicted RBP19.29■□□□□ 0.68
PRDM16-210ENST00000607632 AKAP4Q5JQC9 854 aa19.28■□□□□ 0.68
PRDM16-210ENST00000607632 C1orf141Q5JVX7 400 aa19.28■□□□□ 0.68
PRDM16-210ENST00000607632 PDGFDQ9GZP0 370 aaPredicted RBP19.28■□□□□ 0.68
PRDM16-210ENST00000607632 HMGB2P26583 209 aaKnown RBP19.27■□□□□ 0.68
PRDM16-210ENST00000607632 CICQ96RK0 1608 aaPredicted RBP19.26■□□□□ 0.67
PRDM16-210ENST00000607632 C4BP0C0L5 1744 aa19.26■□□□□ 0.67
PRDM16-210ENST00000607632 KCNQ4P56696 695 aa19.26■□□□□ 0.67
PRDM16-210ENST00000607632 ATG3Q9NT62 314 aa19.26■□□□□ 0.67
PRDM16-210ENST00000607632 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
PRDM16-210ENST00000607632 DDX10Q13206 875 aaKnown RBP19.25■□□□□ 0.67
PRDM16-210ENST00000607632 MTHFSDQ2M296 383 aaKnown RBP19.25■□□□□ 0.67
PRDM16-210ENST00000607632 RSPH6AQ9H0K4 717 aa19.25■□□□□ 0.67
PRDM16-210ENST00000607632 SPON1Q9HCB6 807 aa19.25■□□□□ 0.67
PRDM16-210ENST00000607632 ASAP1Q9ULH1 1129 aa19.25■□□□□ 0.67
PRDM16-210ENST00000607632 PNPLA7Q6ZV29 1317 aa19.24■□□□□ 0.67
PRDM16-210ENST00000607632 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
PRDM16-210ENST00000607632 SIK1P57059 783 aa19.23■□□□□ 0.67
PRDM16-210ENST00000607632 RALBP1Q15311 655 aa19.23■□□□□ 0.67
PRDM16-210ENST00000607632 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms