RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 DACH1Q9UI36 760 aa8.54□□□□□ -1.04
LINC00397-202ENST00000606785 E9PSI1 815 aa8.53□□□□□ -1.04
LINC00397-202ENST00000606785 AXIN1O15169 862 aa8.53□□□□□ -1.04
LINC00397-202ENST00000606785 FOXC1Q12948 553 aa8.53□□□□□ -1.04
LINC00397-202ENST00000606785 SH3BP5LQ7L8J4 393 aa8.53□□□□□ -1.04
LINC00397-202ENST00000606785 ZBTB33Q86T24 672 aa8.53□□□□□ -1.04
LINC00397-202ENST00000606785 RPIAP49247 311 aa8.52□□□□□ -1.05
LINC00397-202ENST00000606785 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
LINC00397-202ENST00000606785 SWI5Q1ZZU3 235 aa8.52□□□□□ -1.05
LINC00397-202ENST00000606785 TRIM50Q86XT4 487 aa8.52□□□□□ -1.05
LINC00397-202ENST00000606785 OGFOD1Q8N543 542 aa8.52□□□□□ -1.05
LINC00397-202ENST00000606785 UNC93B1Q9H1C4 597 aa8.52□□□□□ -1.05
LINC00397-202ENST00000606785 TOR4AQ9NXH8 423 aa8.52□□□□□ -1.05
LINC00397-202ENST00000606785 ATP1A2P50993 1020 aa8.51□□□□□ -1.05
LINC00397-202ENST00000606785 NOD1Q9Y239 953 aa8.51□□□□□ -1.05
LINC00397-202ENST00000606785 ATP2B4P23634 1241 aa8.5□□□□□ -1.05
LINC00397-202ENST00000606785 CLDN10P78369 228 aa8.5□□□□□ -1.05
LINC00397-202ENST00000606785 DPYDQ12882 1025 aa8.5□□□□□ -1.05
LINC00397-202ENST00000606785 DZIP3Q86Y13 1208 aaKnown RBP8.5□□□□□ -1.05
LINC00397-202ENST00000606785 DNAAF2Q9NVR5 837 aaKnown RBP8.5□□□□□ -1.05
LINC00397-202ENST00000606785 TSGA10IPQ3SY00 556 aa8.49□□□□□ -1.05
LINC00397-202ENST00000606785 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
LINC00397-202ENST00000606785 CYP4X1Q8N118 509 aa8.49□□□□□ -1.05
LINC00397-202ENST00000606785 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
LINC00397-202ENST00000606785 ZNF594Q96JF6 807 aaPredicted RBP8.49□□□□□ -1.05
LINC00397-202ENST00000606785 DOLKQ9UPQ8 538 aa8.49□□□□□ -1.05
LINC00397-202ENST00000606785 SH3RF1Q7Z6J0 888 aa8.48□□□□□ -1.05
LINC00397-202ENST00000606785 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
LINC00397-202ENST00000606785 SOWAHDA6NJG2 315 aa8.47□□□□□ -1.05
LINC00397-202ENST00000606785 SIX5Q8N196 739 aa8.47□□□□□ -1.05
LINC00397-202ENST00000606785 C1orf216Q8TAB5 229 aa8.47□□□□□ -1.05
LINC00397-202ENST00000606785 CCDC85AQ96PX6 553 aaPredicted RBP8.47□□□□□ -1.05
LINC00397-202ENST00000606785 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
LINC00397-202ENST00000606785 MAGEB6P1A0A0J9YX57 407 aa8.46□□□□□ -1.06
LINC00397-202ENST00000606785 DKK1O94907 266 aa8.46□□□□□ -1.06
LINC00397-202ENST00000606785 CD2BP2O95400 341 aaKnown RBP8.46□□□□□ -1.06
LINC00397-202ENST00000606785 ZBTB7BO15156 539 aaPredicted RBP8.45□□□□□ -1.06
LINC00397-202ENST00000606785 ERCC3P19447 782 aa8.45□□□□□ -1.06
LINC00397-202ENST00000606785 SERPINB4P48594 390 aa8.45□□□□□ -1.06
LINC00397-202ENST00000606785 GTF2IP78347 998 aa8.45□□□□□ -1.06
LINC00397-202ENST00000606785 OXLD1Q5BKU9 147 aa8.45□□□□□ -1.06
LINC00397-202ENST00000606785 RNF20Q5VTR2 975 aa8.45□□□□□ -1.06
LINC00397-202ENST00000606785 BPHLQ86WA6 291 aaPredicted RBP8.45□□□□□ -1.06
LINC00397-202ENST00000606785 KIAA1024Q9UPX6 916 aa8.45□□□□□ -1.06
LINC00397-202ENST00000606785 GIGYF1O75420 1035 aaPredicted RBP8.44□□□□□ -1.06
LINC00397-202ENST00000606785 SEC13P55735 322 aa8.44□□□□□ -1.06
LINC00397-202ENST00000606785 ERFEQ4G0M1 354 aa8.44□□□□□ -1.06
LINC00397-202ENST00000606785 DNAJC14Q6Y2X3 702 aaPredicted RBP8.44□□□□□ -1.06
LINC00397-202ENST00000606785 RBM19Q9Y4C8 960 aaKnown RBP8.44□□□□□ -1.06
LINC00397-202ENST00000606785 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
LINC00397-202ENST00000606785 RBM47A0AV96 593 aaKnown RBP8.43□□□□□ -1.06
LINC00397-202ENST00000606785 TERTO14746 1132 aaKnown RBP8.43□□□□□ -1.06
LINC00397-202ENST00000606785 LCE2CQ5TA81 110 aa8.43□□□□□ -1.06
LINC00397-202ENST00000606785 BAP1Q92560 729 aa8.43□□□□□ -1.06
LINC00397-202ENST00000606785 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
LINC00397-202ENST00000606785 AGERQ15109 404 aa8.42□□□□□ -1.06
LINC00397-202ENST00000606785 CCDC102BQ68D86 513 aa8.42□□□□□ -1.06
LINC00397-202ENST00000606785 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
LINC00397-202ENST00000606785 SIRT1Q96EB6 747 aa8.42□□□□□ -1.06
LINC00397-202ENST00000606785 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
LINC00397-202ENST00000606785 PRMT3O60678 531 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 OCLNQ16625 522 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 NBPF20Q3BBV1 942 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 TAS1R3Q7RTX0 852 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 TPCN2Q8NHX9 752 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 ATP13A2Q9NQ11 1180 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 CXXC1Q9P0U4 656 aaPredicted RBP8.41□□□□□ -1.06
LINC00397-202ENST00000606785 FCF1Q9Y324 198 aaKnown RBP8.41□□□□□ -1.06
LINC00397-202ENST00000606785 PCDHGA11Q9Y5H2 935 aa8.41□□□□□ -1.06
LINC00397-202ENST00000606785 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 ESPNB1AK53 854 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 SCNN1AP37088 669 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 USP4Q13107 963 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 CCDC125Q86Z20 511 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 TRIM47Q96LD4 638 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 SENP2Q9HC62 589 aa8.4□□□□□ -1.06
LINC00397-202ENST00000606785 TTC24A2A3L6 582 aaPredicted RBP8.39□□□□□ -1.07
LINC00397-202ENST00000606785 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
LINC00397-202ENST00000606785 SFI1A8K8P3 1242 aa8.39□□□□□ -1.07
LINC00397-202ENST00000606785 MARSP56192 900 aaKnown RBP8.39□□□□□ -1.07
LINC00397-202ENST00000606785 PSME1Q06323 249 aa8.39□□□□□ -1.07
LINC00397-202ENST00000606785 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
LINC00397-202ENST00000606785 PRIMPOLQ96LW4 560 aa8.39□□□□□ -1.07
LINC00397-202ENST00000606785 BIN2Q9UBW5 565 aaPredicted RBP8.39□□□□□ -1.07
LINC00397-202ENST00000606785 EGFL7Q9UHF1 273 aa8.39□□□□□ -1.07
LINC00397-202ENST00000606785 CDV3Q9UKY7 258 aaKnown RBP8.39□□□□□ -1.07
LINC00397-202ENST00000606785 SNRPBP14678 240 aaKnown RBP8.38□□□□□ -1.07
LINC00397-202ENST00000606785 TRMT44Q8IYL2 757 aaKnown RBP8.38□□□□□ -1.07
LINC00397-202ENST00000606785 PCDHB11Q9Y5F2 797 aa8.38□□□□□ -1.07
LINC00397-202ENST00000606785 NOM1Q5C9Z4 860 aaKnown RBP8.37□□□□□ -1.07
LINC00397-202ENST00000606785 KIFC2Q96AC6 838 aa8.36□□□□□ -1.07
LINC00397-202ENST00000606785 M0R2N6 131 aa8.35□□□□□ -1.07
LINC00397-202ENST00000606785 WNT7AO00755 349 aa8.35□□□□□ -1.07
LINC00397-202ENST00000606785 ABL1P00519 1130 aa8.35□□□□□ -1.07
LINC00397-202ENST00000606785 SMPD1P17405 629 aa8.35□□□□□ -1.07
LINC00397-202ENST00000606785 SH3BP2P78314 561 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms