RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 C16orf45Q96MC5 204 aaPredicted RBP18.68■□□□□ 0.58
RER1-209ENST00000605895 PREX2Q70Z35 1606 aa18.68■□□□□ 0.58
RER1-209ENST00000605895 PLCD3Q8N3E9 789 aa18.68■□□□□ 0.58
RER1-209ENST00000605895 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
RER1-209ENST00000605895 ZNF592Q92610 1267 aa18.68■□□□□ 0.58
RER1-209ENST00000605895 STAC3Q96MF2 364 aa18.68■□□□□ 0.58
RER1-209ENST00000605895 A0A1W2PP64 1363 aa18.67■□□□□ 0.58
RER1-209ENST00000605895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.584e-13■■■□□ 16.9
RER1-209ENST00000605895 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.67■□□□□ 0.58
RER1-209ENST00000605895 V9GYY5 206 aaPredicted RBP18.67■□□□□ 0.58
RER1-209ENST00000605895 CHAF1AQ13111 956 aaPredicted RBP18.67■□□□□ 0.58
RER1-209ENST00000605895 KCNF1Q9H3M0 494 aa18.67■□□□□ 0.58
RER1-209ENST00000605895 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 F6X3S4 739 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 TRERF1Q96PN7 1200 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 MIS18AQ9NYP9 233 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 IL16Q14005 1332 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 FKBP5Q13451 457 aaPredicted RBP18.66■□□□□ 0.58
RER1-209ENST00000605895 GTPBP4Q9BZE4 634 aaKnown RBP18.66■□□□□ 0.58
RER1-209ENST00000605895 SRCIN1Q9C0H9 1055 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 ABCA6Q8N139 1617 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 NPHP1O15259 732 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 CPA1P15085 419 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 CAMK4Q16566 473 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 EMILIN1Q9Y6C2 1016 aa18.66■□□□□ 0.58
RER1-209ENST00000605895 LRMPQ12912 555 aa18.65■□□□□ 0.58
RER1-209ENST00000605895 CEP85Q6P2H3 762 aa18.65■□□□□ 0.58
RER1-209ENST00000605895 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.65■□□□□ 0.58
RER1-209ENST00000605895 ABCC4O15439 1325 aa18.65■□□□□ 0.58
RER1-209ENST00000605895 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
RER1-209ENST00000605895 PTGS1P23219 599 aa18.64■□□□□ 0.57
RER1-209ENST00000605895 DRC7Q8IY82 874 aa18.64■□□□□ 0.57
RER1-209ENST00000605895 TRPM2O94759 1503 aa18.64■□□□□ 0.57
RER1-209ENST00000605895 ERICH4A6NGS2 130 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
RER1-209ENST00000605895 KDM4AO75164 1064 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 PHF14O94880 888 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 ZRANB1Q9UGI0 708 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 ANKRD36BQ8N2N9 1353 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 PDE4CQ08493 712 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 NECTIN2Q92692 538 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 CABP1Q9NZU7 370 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 SHROOM2Q13796 1616 aa18.63■□□□□ 0.57
RER1-209ENST00000605895 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
RER1-209ENST00000605895 ANKRD44Q8N8A2 993 aa18.62■□□□□ 0.57
RER1-209ENST00000605895 IL25Q9H293 177 aa18.62■□□□□ 0.57
RER1-209ENST00000605895 LETM1O95202 739 aaPredicted RBP18.62■□□□□ 0.57
RER1-209ENST00000605895 GNAI1P63096 354 aa18.62■□□□□ 0.57
RER1-209ENST00000605895 IFT57Q9NWB7 429 aa18.62■□□□□ 0.57
RER1-209ENST00000605895 PDE1AP54750 535 aa18.61■□□□□ 0.57
RER1-209ENST00000605895 UNC5CLQ8IV45 518 aa18.61■□□□□ 0.57
RER1-209ENST00000605895 NRBP1Q9UHY1 535 aa18.61■□□□□ 0.57
RER1-209ENST00000605895 FCHSD2O94868 740 aa18.61■□□□□ 0.57
RER1-209ENST00000605895 KIF20AO95235 890 aa18.61■□□□□ 0.57
RER1-209ENST00000605895 CCDC183Q5T5S1 534 aa18.6■□□□□ 0.57
RER1-209ENST00000605895 KIAA1524Q8TCG1 905 aa18.6■□□□□ 0.57
RER1-209ENST00000605895 ARHGAP45Q92619 1136 aa18.6■□□□□ 0.57
RER1-209ENST00000605895 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
RER1-209ENST00000605895 TCHHQ07283 1943 aa18.59■□□□□ 0.57
RER1-209ENST00000605895 GTF2F1P35269 517 aaKnown RBP eCLIP18.59■□□□□ 0.574e-7■■■■■ 31.2
RER1-209ENST00000605895 RRS1Q15050 365 aaKnown RBP18.59■□□□□ 0.57
RER1-209ENST00000605895 SOX12O15370 315 aa18.59■□□□□ 0.57
RER1-209ENST00000605895 MCM10Q7L590 875 aa18.59■□□□□ 0.57
RER1-209ENST00000605895 CKAP2LQ8IYA6 745 aa18.59■□□□□ 0.57
RER1-209ENST00000605895 MX1P20591 662 aa18.58■□□□□ 0.57
RER1-209ENST00000605895 LUZP1Q86V48 1076 aa18.58■□□□□ 0.57
RER1-209ENST00000605895 ESYT1Q9BSJ8 1104 aa18.58■□□□□ 0.57
RER1-209ENST00000605895 IL1RAPL2Q9NP60 686 aa18.58■□□□□ 0.57
RER1-209ENST00000605895 DIAPH3Q9NSV4 1193 aa18.58■□□□□ 0.57
RER1-209ENST00000605895 KCNJ4P48050 445 aa18.58■□□□□ 0.56
RER1-209ENST00000605895 DNM1Q05193 864 aaKnown RBP18.58■□□□□ 0.56
RER1-209ENST00000605895 TMEM51Q9NW97 253 aa18.58■□□□□ 0.56
RER1-209ENST00000605895 POLKQ9UBT6 870 aa18.58■□□□□ 0.56
RER1-209ENST00000605895 MED14O60244 1454 aa18.58■□□□□ 0.56
RER1-209ENST00000605895 MSH6P52701 1360 aa18.58■□□□□ 0.56
RER1-209ENST00000605895 NCBP1Q09161 790 aaKnown RBP18.58■□□□□ 0.56
RER1-209ENST00000605895 FERMT3Q86UX7 667 aa18.58■□□□□ 0.56
RER1-209ENST00000605895 CCDC186Q7Z3E2 898 aa18.57■□□□□ 0.56
RER1-209ENST00000605895 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
RER1-209ENST00000605895 SPTLC3Q9NUV7 552 aa18.57■□□□□ 0.56
RER1-209ENST00000605895 ARHGAP31Q2M1Z3 1444 aa18.57■□□□□ 0.56
RER1-209ENST00000605895 MCCP23508 829 aa18.57■□□□□ 0.56
RER1-209ENST00000605895 MAP3K4Q9Y6R4 1608 aa18.57■□□□□ 0.56
RER1-209ENST00000605895 VPS37CA5D8V6 355 aaPredicted RBP18.56■□□□□ 0.56
RER1-209ENST00000605895 SLC4A2P04920 1241 aa18.56■□□□□ 0.56
RER1-209ENST00000605895 ST7Q9NRC1 585 aa18.56■□□□□ 0.56
RER1-209ENST00000605895 TERF2IPQ9NYB0 399 aa18.56■□□□□ 0.56
RER1-209ENST00000605895 WDR33Q9C0J8 1336 aaKnown RBP18.56■□□□□ 0.56
RER1-209ENST00000605895 FAM184AQ8NB25 1140 aa18.56■□□□□ 0.56
RER1-209ENST00000605895 ADGRB2O60241 1585 aa18.55■□□□□ 0.56
RER1-209ENST00000605895 G2E3Q7L622 706 aa18.55■□□□□ 0.56
RER1-209ENST00000605895 CDK11BP21127 795 aaKnown RBP18.55■□□□□ 0.56
RER1-209ENST00000605895 CUL4AQ13619 759 aa18.55■□□□□ 0.56
RER1-209ENST00000605895 NAP1L2Q9ULW6 460 aaPredicted RBP18.55■□□□□ 0.56
RER1-209ENST00000605895 NUTM1Q86Y26 1132 aa18.54■□□□□ 0.56
RER1-209ENST00000605895 SBNO2Q9Y2G9 1366 aa18.54■□□□□ 0.56
RER1-209ENST00000605895 SYT1P21579 422 aa18.54■□□□□ 0.56
RER1-209ENST00000605895 SYTL4Q96C24 671 aaPredicted RBP18.54■□□□□ 0.56
RER1-209ENST00000605895 UVSSAQ2YD98 709 aa18.53■□□□□ 0.56
RER1-209ENST00000605895 RPAP2Q8IXW5 612 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms