RNA–Protein interactions for RNA: ENST00000604609.2

GDF15-205, Transcript of growth differentiation factor 15, humanhuman

TSL 3

Gene GDF15, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF15-205ENST00000604609 MARCH10Q8NA82 808 aaPredicted RBP13.18□□□□□ -0.3
GDF15-205ENST00000604609 RAPGEF4Q8WZA2 1011 aa13.18□□□□□ -0.3
GDF15-205ENST00000604609 THRAP3Q9Y2W1 955 aaKnown RBP13.18□□□□□ -0.3
GDF15-205ENST00000604609 OVOS2A0A0G2JMS6 1433 aa13.18□□□□□ -0.3
GDF15-205ENST00000604609 TATP17735 454 aaPredicted RBP13.17□□□□□ -0.3
GDF15-205ENST00000604609 DDX54Q8TDD1 881 aaKnown RBP13.17□□□□□ -0.3
GDF15-205ENST00000604609 NUDCQ9Y266 331 aa13.17□□□□□ -0.3
GDF15-205ENST00000604609 THSD7AQ9UPZ6 1657 aa13.17□□□□□ -0.3
GDF15-205ENST00000604609 CYP27B1O15528 508 aa13.16□□□□□ -0.3
GDF15-205ENST00000604609 DDB1Q16531 1140 aa13.16□□□□□ -0.3
GDF15-205ENST00000604609 MTHFSDQ2M296 383 aaKnown RBP13.16□□□□□ -0.3
GDF15-205ENST00000604609 PTF1AQ7RTS3 328 aa13.16□□□□□ -0.3
GDF15-205ENST00000604609 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
GDF15-205ENST00000604609 PLEKHF1Q96S99 279 aa13.16□□□□□ -0.3
GDF15-205ENST00000604609 TNS2Q63HR2 1409 aa13.15□□□□□ -0.3
GDF15-205ENST00000604609 WDR43Q15061 677 aaKnown RBP eCLIP13.15□□□□□ -0.3
GDF15-205ENST00000604609 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
GDF15-205ENST00000604609 RRP7AQ9Y3A4 280 aaKnown RBP13.15□□□□□ -0.3
GDF15-205ENST00000604609 LRRC37A3O60309 1634 aa13.14□□□□□ -0.31
GDF15-205ENST00000604609 CCER2I3L3R5 266 aa13.14□□□□□ -0.31
GDF15-205ENST00000604609 KRT27Q7Z3Y8 459 aa13.14□□□□□ -0.31
GDF15-205ENST00000604609 EXOC5O00471 708 aa13.13□□□□□ -0.31
GDF15-205ENST00000604609 FCHSD2O94868 740 aa13.13□□□□□ -0.31
GDF15-205ENST00000604609 ZNF530Q6P9A1 599 aaPredicted RBP13.13□□□□□ -0.31
GDF15-205ENST00000604609 PHKG2P15735 406 aa13.12□□□□□ -0.31
GDF15-205ENST00000604609 CDCA7Q9BWT1 371 aaPredicted RBP13.12□□□□□ -0.31
GDF15-205ENST00000604609 PDE3BQ13370 1112 aa13.11□□□□□ -0.31
GDF15-205ENST00000604609 DCTN1Q14203 1278 aa13.11□□□□□ -0.31
GDF15-205ENST00000604609 PLEKHO1Q53GL0 409 aaPredicted RBP13.11□□□□□ -0.31
GDF15-205ENST00000604609 ACSBG1Q96GR2 724 aa13.11□□□□□ -0.31
GDF15-205ENST00000604609 KCNQ2O43526 872 aa13.1□□□□□ -0.31
GDF15-205ENST00000604609 MPRIPQ6WCQ1 1025 aa13.1□□□□□ -0.31
GDF15-205ENST00000604609 THUMPD2Q9BTF0 503 aaKnown RBP13.1□□□□□ -0.31
GDF15-205ENST00000604609 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
GDF15-205ENST00000604609 SPG7Q9UQ90 795 aa13.1□□□□□ -0.31
GDF15-205ENST00000604609 KDM6AO15550 1401 aaPredicted RBP13.1□□□□□ -0.31
GDF15-205ENST00000604609 APAF1O14727 1248 aa13.09□□□□□ -0.31
GDF15-205ENST00000604609 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
GDF15-205ENST00000604609 PCDH11XQ9BZA7 1347 aa13.09□□□□□ -0.31
GDF15-205ENST00000604609 PCDH11YQ9BZA8 1340 aa13.09□□□□□ -0.31
GDF15-205ENST00000604609 RUNDC1Q96C34 613 aa13.08□□□□□ -0.32
GDF15-205ENST00000604609 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.08□□□□□ -0.32
GDF15-205ENST00000604609 SALL2Q9Y467 1007 aaPredicted RBP13.08□□□□□ -0.32
GDF15-205ENST00000604609 PARP4Q9UKK3 1724 aaKnown RBP13.08□□□□□ -0.32
GDF15-205ENST00000604609 WNK3Q9BYP7 1800 aa13.07□□□□□ -0.32
GDF15-205ENST00000604609 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
GDF15-205ENST00000604609 NFE2L2Q16236 605 aa13.07□□□□□ -0.32
GDF15-205ENST00000604609 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
GDF15-205ENST00000604609 MCM10Q7L590 875 aa13.07□□□□□ -0.32
GDF15-205ENST00000604609 IFNL2Q8IZJ0 200 aa13.07□□□□□ -0.32
GDF15-205ENST00000604609 IL17REQ8NFR9 667 aa13.07□□□□□ -0.32
GDF15-205ENST00000604609 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
GDF15-205ENST00000604609 SHANK3Q9BYB0 1731 aa13.06□□□□□ -0.32
GDF15-205ENST00000604609 TRIM37O94972 964 aa13.06□□□□□ -0.32
GDF15-205ENST00000604609 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
GDF15-205ENST00000604609 NKX1-1Q15270 411 aaPredicted RBP13.05□□□□□ -0.32
GDF15-205ENST00000604609 AKAP4Q5JQC9 854 aa13.05□□□□□ -0.32
GDF15-205ENST00000604609 C1orf141Q5JVX7 400 aa13.05□□□□□ -0.32
GDF15-205ENST00000604609 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
GDF15-205ENST00000604609 SYTL4Q96C24 671 aaPredicted RBP13.05□□□□□ -0.32
GDF15-205ENST00000604609 TRIM35Q9UPQ4 493 aa13.05□□□□□ -0.32
GDF15-205ENST00000604609 MAP3K5Q99683 1374 aa13.05□□□□□ -0.32
GDF15-205ENST00000604609 PKD1L3Q7Z443 1732 aa13.05□□□□□ -0.32
GDF15-205ENST00000604609 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
GDF15-205ENST00000604609 RIPK4P57078 832 aa13.04□□□□□ -0.32
GDF15-205ENST00000604609 GNAT3A8MTJ3 354 aa13.03□□□□□ -0.32
GDF15-205ENST00000604609 FAM196AQ6ZSG2 479 aa13.03□□□□□ -0.32
GDF15-205ENST00000604609 BRWD3Q6RI45 1802 aa13.03□□□□□ -0.32
GDF15-205ENST00000604609 PIGBQ92521 554 aa13.02□□□□□ -0.33
GDF15-205ENST00000604609 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
GDF15-205ENST00000604609 MIS18AQ9NYP9 233 aa13.02□□□□□ -0.33
GDF15-205ENST00000604609 KCNQ3O43525 872 aa13.01□□□□□ -0.33
GDF15-205ENST00000604609 NFATC2IPQ8NCF5 419 aa13.01□□□□□ -0.33
GDF15-205ENST00000604609 PLEKHG2Q9H7P9 1386 aa13.01□□□□□ -0.33
GDF15-205ENST00000604609 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
GDF15-205ENST00000604609 EP400Q96L91 3159 aa13□□□□□ -0.33
GDF15-205ENST00000604609 BCL9O00512 1426 aa13□□□□□ -0.33
GDF15-205ENST00000604609 CEMIPQ8WUJ3 1361 aa13□□□□□ -0.33
GDF15-205ENST00000604609 KCNQ4P56696 695 aa13□□□□□ -0.33
GDF15-205ENST00000604609 SLC39A6Q13433 755 aa13□□□□□ -0.33
GDF15-205ENST00000604609 DEFB132Q7Z7B7 95 aa13□□□□□ -0.33
GDF15-205ENST00000604609 UPF1Q92900 1129 aaKnown RBP eCLIP13□□□□□ -0.33
GDF15-205ENST00000604609 PNNQ9H307 717 aaKnown RBP13□□□□□ -0.33
GDF15-205ENST00000604609 NEFMP07197 916 aa12.99□□□□□ -0.33
GDF15-205ENST00000604609 CABP4P57796 275 aa12.99□□□□□ -0.33
GDF15-205ENST00000604609 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
GDF15-205ENST00000604609 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
GDF15-205ENST00000604609 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
GDF15-205ENST00000604609 BCL11BQ9C0K0 894 aaPredicted RBP12.98□□□□□ -0.33
GDF15-205ENST00000604609 TMOD3Q9NYL9 352 aa12.98□□□□□ -0.33
GDF15-205ENST00000604609 ERVV-2B6SEH9 535 aa12.97□□□□□ -0.33
GDF15-205ENST00000604609 APBA3O96018 575 aa12.97□□□□□ -0.33
GDF15-205ENST00000604609 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
GDF15-205ENST00000604609 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
GDF15-205ENST00000604609 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
GDF15-205ENST00000604609 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
GDF15-205ENST00000604609 EN1Q05925 392 aaPredicted RBP12.96□□□□□ -0.33
GDF15-205ENST00000604609 SLC4A9Q96Q91 983 aa12.96□□□□□ -0.33
GDF15-205ENST00000604609 MRC1P22897 1456 aa12.96□□□□□ -0.34
GDF15-205ENST00000604609 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms