RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 U2SURPO15042 1029 aaKnown RBP20.88■□□□□ 0.93
CDCA3-211ENST00000603043 AEBP1Q8IUX7 1158 aa20.88■□□□□ 0.93
CDCA3-211ENST00000603043 PKD1L3Q7Z443 1732 aa20.88■□□□□ 0.93
CDCA3-211ENST00000603043 NUDCQ9Y266 331 aa20.87■□□□□ 0.93
CDCA3-211ENST00000603043 FAM182BQ5T319 152 aa20.86■□□□□ 0.93
CDCA3-211ENST00000603043 HMOX1P09601 288 aa20.85■□□□□ 0.93
CDCA3-211ENST00000603043 ZCRB1Q8TBF4 217 aaKnown RBP20.85■□□□□ 0.93
CDCA3-211ENST00000603043 MARCH10Q8NA82 808 aaPredicted RBP20.84■□□□□ 0.93
CDCA3-211ENST00000603043 PLEKHG2Q9H7P9 1386 aa20.84■□□□□ 0.93
CDCA3-211ENST00000603043 U2AF1L5P0DN76 240 aaPredicted RBP20.82■□□□□ 0.92
CDCA3-211ENST00000603043 U2AF1Q01081 240 aaKnown RBP eCLIP20.82■□□□□ 0.92
CDCA3-211ENST00000603043 DDX54Q8TDD1 881 aaKnown RBP20.82■□□□□ 0.92
CDCA3-211ENST00000603043 FAM196AQ6ZSG2 479 aa20.81■□□□□ 0.92
CDCA3-211ENST00000603043 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
CDCA3-211ENST00000603043 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
CDCA3-211ENST00000603043 SBF2Q86WG5 1849 aa20.81■□□□□ 0.92
CDCA3-211ENST00000603043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.81■□□□□ 0.92
CDCA3-211ENST00000603043 SPG7Q9UQ90 795 aa20.81■□□□□ 0.92
CDCA3-211ENST00000603043 KAT6BQ8WYB5 2073 aa20.81■□□□□ 0.92
CDCA3-211ENST00000603043 BCL9O00512 1426 aa20.78■□□□□ 0.92
CDCA3-211ENST00000603043 PLEKHO1Q53GL0 409 aaPredicted RBP20.78■□□□□ 0.92
CDCA3-211ENST00000603043 AMOTQ4VCS5 1084 aa20.77■□□□□ 0.92
CDCA3-211ENST00000603043 CYP27B1O15528 508 aa20.77■□□□□ 0.92
CDCA3-211ENST00000603043 SOCS7O14512 581 aa20.76■□□□□ 0.91
CDCA3-211ENST00000603043 RSPH6AQ9H0K4 717 aa20.76■□□□□ 0.91
CDCA3-211ENST00000603043 FCHSD2O94868 740 aa20.76■□□□□ 0.91
CDCA3-211ENST00000603043 DOT1LQ8TEK3 1739 aa20.75■□□□□ 0.91
CDCA3-211ENST00000603043 PRKAR2BP31323 418 aa20.75■□□□□ 0.91
CDCA3-211ENST00000603043 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
CDCA3-211ENST00000603043 UPF1Q92900 1129 aaKnown RBP eCLIP20.75■□□□□ 0.91
CDCA3-211ENST00000603043 TNS1Q9HBL0 1735 aaKnown RBP20.74■□□□□ 0.91
CDCA3-211ENST00000603043 CCDC184Q52MB2 194 aa20.74■□□□□ 0.91
CDCA3-211ENST00000603043 ZNF530Q6P9A1 599 aaPredicted RBP20.74■□□□□ 0.91
CDCA3-211ENST00000603043 IFNL2Q8IZJ0 200 aa20.74■□□□□ 0.91
CDCA3-211ENST00000603043 NHSQ6T4R5 1651 aa20.73■□□□□ 0.91
CDCA3-211ENST00000603043 TRIM37O94972 964 aa20.73■□□□□ 0.91
CDCA3-211ENST00000603043 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
CDCA3-211ENST00000603043 PHKG2P15735 406 aa20.72■□□□□ 0.91
CDCA3-211ENST00000603043 CCDC125Q86Z20 511 aa20.72■□□□□ 0.91
CDCA3-211ENST00000603043 C1orf141Q5JVX7 400 aa20.71■□□□□ 0.91
CDCA3-211ENST00000603043 MRS2Q9HD23 443 aa20.71■□□□□ 0.91
CDCA3-211ENST00000603043 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
CDCA3-211ENST00000603043 MTHFSDQ2M296 383 aaKnown RBP20.7■□□□□ 0.9
CDCA3-211ENST00000603043 ACSBG1Q96GR2 724 aa20.7■□□□□ 0.9
CDCA3-211ENST00000603043 VIRMAQ69YN4 1812 aaKnown RBP20.7■□□□□ 0.9
CDCA3-211ENST00000603043 NKX1-1Q15270 411 aaPredicted RBP20.7■□□□□ 0.9
CDCA3-211ENST00000603043 PHACTR3Q96KR7 559 aa20.7■□□□□ 0.9
CDCA3-211ENST00000603043 SF3B2Q13435 895 aaKnown RBP20.69■□□□□ 0.9
CDCA3-211ENST00000603043 PNNQ9H307 717 aaKnown RBP20.69■□□□□ 0.9
CDCA3-211ENST00000603043 ITGB4P16144 1822 aa20.69■□□□□ 0.9
CDCA3-211ENST00000603043 NEFMP07197 916 aa20.68■□□□□ 0.9
CDCA3-211ENST00000603043 KCNQ2O43526 872 aa20.68■□□□□ 0.9
CDCA3-211ENST00000603043 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
CDCA3-211ENST00000603043 BCL11BQ9C0K0 894 aaPredicted RBP20.68■□□□□ 0.9
CDCA3-211ENST00000603043 BTAF1O14981 1849 aa20.67■□□□□ 0.9
CDCA3-211ENST00000603043 HSP90AB1P08238 724 aaKnown RBP20.67■□□□□ 0.9
CDCA3-211ENST00000603043 AKAP4Q5JQC9 854 aa20.67■□□□□ 0.9
CDCA3-211ENST00000603043 PLEKHF1Q96S99 279 aa20.67■□□□□ 0.9
CDCA3-211ENST00000603043 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
CDCA3-211ENST00000603043 SCN11AQ9UI33 1791 aa20.67■□□□□ 0.9
CDCA3-211ENST00000603043 PTF1AQ7RTS3 328 aa20.66■□□□□ 0.9
CDCA3-211ENST00000603043 SYTL4Q96C24 671 aaPredicted RBP20.66■□□□□ 0.9
CDCA3-211ENST00000603043 DCAF5Q96JK2 942 aa20.66■□□□□ 0.9
CDCA3-211ENST00000603043 MAPK8IP3Q9UPT6 1336 aa20.66■□□□□ 0.9
CDCA3-211ENST00000603043 PRIM1P49642 420 aaKnown RBP20.65■□□□□ 0.9
CDCA3-211ENST00000603043 KDM6AO15550 1401 aaPredicted RBP20.65■□□□□ 0.9
CDCA3-211ENST00000603043 DLG5Q8TDM6 1919 aa20.64■□□□□ 0.9
CDCA3-211ENST00000603043 MAP3K5Q99683 1374 aa20.63■□□□□ 0.89
CDCA3-211ENST00000603043 APBA3O96018 575 aa20.63■□□□□ 0.89
CDCA3-211ENST00000603043 MPRIPQ6WCQ1 1025 aa20.63■□□□□ 0.89
CDCA3-211ENST00000603043 PNISRQ8TF01 805 aaKnown RBP20.63■□□□□ 0.89
CDCA3-211ENST00000603043 BAG6P46379 1132 aa20.63■□□□□ 0.89
CDCA3-211ENST00000603043 ADAMTS7Q9UKP4 1686 aa20.62■□□□□ 0.89
CDCA3-211ENST00000603043 CCDC146Q8IYE0 955 aa20.62■□□□□ 0.89
CDCA3-211ENST00000603043 GNAT3A8MTJ3 354 aa20.61■□□□□ 0.89
CDCA3-211ENST00000603043 DEFB132Q7Z7B7 95 aa20.61■□□□□ 0.89
CDCA3-211ENST00000603043 RGPD3A6NKT7 1758 aaPredicted RBP20.61■□□□□ 0.89
CDCA3-211ENST00000603043 RGPD4Q7Z3J3 1758 aa20.61■□□□□ 0.89
CDCA3-211ENST00000603043 ERVV-2B6SEH9 535 aa20.59■□□□□ 0.89
CDCA3-211ENST00000603043 RUNDC1Q96C34 613 aa20.59■□□□□ 0.89
CDCA3-211ENST00000603043 TMOD3Q9NYL9 352 aa20.59■□□□□ 0.89
CDCA3-211ENST00000603043 CCER2I3L3R5 266 aa20.58■□□□□ 0.89
CDCA3-211ENST00000603043 RNMTO43148 476 aaKnown RBP20.58■□□□□ 0.89
CDCA3-211ENST00000603043 EN1Q05925 392 aaPredicted RBP20.58■□□□□ 0.89
CDCA3-211ENST00000603043 NFE2L2Q16236 605 aa20.58■□□□□ 0.89
CDCA3-211ENST00000603043 LGR6Q9HBX8 967 aa20.58■□□□□ 0.89
CDCA3-211ENST00000603043 MIER1Q8N108 512 aa20.57■□□□□ 0.88
CDCA3-211ENST00000603043 MRC1P22897 1456 aa20.57■□□□□ 0.88
CDCA3-211ENST00000603043 PLSCR1O15162 318 aa20.57■□□□□ 0.88
CDCA3-211ENST00000603043 CABP4P57796 275 aa20.57■□□□□ 0.88
CDCA3-211ENST00000603043 PIGBQ92521 554 aa20.57■□□□□ 0.88
CDCA3-211ENST00000603043 RTF1Q92541 710 aaKnown RBP20.56■□□□□ 0.88
CDCA3-211ENST00000603043 IL17REQ8NFR9 667 aa20.55■□□□□ 0.88
CDCA3-211ENST00000603043 CAMKK2Q96RR4 588 aa20.55■□□□□ 0.88
CDCA3-211ENST00000603043 LY75O60449 1722 aa20.55■□□□□ 0.88
CDCA3-211ENST00000603043 RREB1Q92766 1687 aa20.55■□□□□ 0.88
CDCA3-211ENST00000603043 SIPA1L3O60292 1781 aaPredicted RBP20.54■□□□□ 0.88
CDCA3-211ENST00000603043 EZH2Q15910 746 aaKnown RBP20.54■□□□□ 0.88
CDCA3-211ENST00000603043 FAM9BQ8IZU0 186 aa20.54■□□□□ 0.88
CDCA3-211ENST00000603043 NFATC2IPQ8NCF5 419 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms