RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 V9GYY5 206 aaPredicted RBP10.2□□□□□ -0.78
CSMD1-216ENST00000602557 TTC39AQ5SRH9 613 aa10.2□□□□□ -0.78
CSMD1-216ENST00000602557 URI1O94763 535 aaPredicted RBP10.19□□□□□ -0.78
CSMD1-216ENST00000602557 ATP2B2Q01814 1243 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 DRC1Q96MC2 740 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 RAI14Q9P0K7 980 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 ATAD2BQ9ULI0 1458 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 CTR9Q6PD62 1173 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 ABTB2Q8N961 1025 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 JMYQ8N9B5 988 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 NUP62CLQ9H1M0 184 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 CYP46A1Q9Y6A2 500 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 EXOSC9Q06265 439 aaKnown RBP10.19□□□□□ -0.78
CSMD1-216ENST00000602557 ERC1Q8IUD2 1116 aa10.19□□□□□ -0.78
CSMD1-216ENST00000602557 IQCEQ6IPM2 695 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 WDR33Q9C0J8 1336 aaKnown RBP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 ERICH3Q5RHP9 1530 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 HECW1Q76N89 1606 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 BCCIPQ9P287 314 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 CFTRP13569 1480 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 BCAR3O75815 825 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 TWISTNBQ3B726 338 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 CIZ1Q9ULV3 898 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 XRCC6P12956 609 aaKnown RBP eCLIP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 TNPO1Q92973 898 aaKnown RBP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 CCDC113Q9H0I3 377 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 SYCP1Q15431 976 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 CLIP2Q9UDT6 1046 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 SARNPP82979 210 aaKnown RBP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 CCDC91Q7Z6B0 441 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 KIAA1328Q86T90 577 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 CEP57Q86XR8 500 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 STIM1Q13586 685 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 MICALL1Q8N3F8 863 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 CEP135Q66GS9 1140 aa10.18□□□□□ -0.78
CSMD1-216ENST00000602557 RRAGDQ9NQL2 400 aaPredicted RBP10.18□□□□□ -0.78
CSMD1-216ENST00000602557 SCAPERQ9BY12 1400 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 KIF2AO00139 706 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-216ENST00000602557 MAP2K1Q02750 393 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-216ENST00000602557 ADCY5O95622 1261 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 CBFA2T2O43439 604 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 MAP9Q49MG5 647 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 SMARCC1Q92922 1105 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-216ENST00000602557 MAP3K11Q16584 847 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 CEP57L1Q8IYX8 460 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 GAS2L2Q8NHY3 880 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 SCLT1Q96NL6 688 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 ARID4AP29374 1257 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-216ENST00000602557 PIP4K2AP48426 406 aaPredicted RBP10.17□□□□□ -0.78
CSMD1-216ENST00000602557 PAF1Q8N7H5 531 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 TRIM22Q8IYM9 498 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 ZHX3Q9H4I2 956 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 CNNM1Q9NRU3 951 aa10.17□□□□□ -0.78
CSMD1-216ENST00000602557 SFPQP23246 707 aaKnown RBP eCLIP10.16□□□□□ -0.78
CSMD1-216ENST00000602557 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.16□□□□□ -0.782e-6■■■■■ 29.1
CSMD1-216ENST00000602557 ZSWIM4Q9H7M6 989 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 ARHGAP29Q52LW3 1261 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 CYB5RLQ6IPT4 315 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 CCDC148Q8NFR7 591 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 CEP63Q96MT8 703 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 BMS1Q14692 1282 aaKnown RBP10.16□□□□□ -0.78
CSMD1-216ENST00000602557 NAA25Q14CX7 972 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 PRIMPOLQ96LW4 560 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
CSMD1-216ENST00000602557 GNL3LQ9NVN8 582 aaKnown RBP10.16□□□□□ -0.78
CSMD1-216ENST00000602557 CASKIN1Q8WXD9 1431 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 CCDC183Q5T5S1 534 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 GCC1Q96CN9 775 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 KRT85P78386 507 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 HDGFL1Q5TGJ6 251 aa10.16□□□□□ -0.78
CSMD1-216ENST00000602557 EZRP15311 586 aaKnown RBP10.15□□□□□ -0.78
CSMD1-216ENST00000602557 CPSF2Q9P2I0 782 aaKnown RBP10.15□□□□□ -0.78
CSMD1-216ENST00000602557 EPB41L2O43491 1005 aaKnown RBP10.15□□□□□ -0.78
CSMD1-216ENST00000602557 LARP1BQ659C4 914 aaKnown RBP10.15□□□□□ -0.78
CSMD1-216ENST00000602557 AACSQ86V21 672 aa10.15□□□□□ -0.78
CSMD1-216ENST00000602557 NUP133Q8WUM0 1156 aa10.15□□□□□ -0.78
CSMD1-216ENST00000602557 SPATA32Q96LK8 384 aa10.15□□□□□ -0.78
CSMD1-216ENST00000602557 EHBP1L1Q8N3D4 1523 aa10.15□□□□□ -0.78
CSMD1-216ENST00000602557 ANKRD1Q15327 319 aa10.15□□□□□ -0.78
CSMD1-216ENST00000602557 RASSF4Q9H2L5 321 aa10.15□□□□□ -0.78
CSMD1-216ENST00000602557 PDE3AQ14432 1141 aa10.15□□□□□ -0.78
CSMD1-216ENST00000602557 SEPT11Q9NVA2 429 aaKnown RBP10.15□□□□□ -0.78
CSMD1-216ENST00000602557 SPINK5Q9NQ38 1064 aaPredicted RBP10.15□□□□□ -0.78
CSMD1-216ENST00000602557 C9orf84Q5VXU9 1444 aa10.15□□□□□ -0.79
CSMD1-216ENST00000602557 MCM5P33992 734 aa10.15□□□□□ -0.79
CSMD1-216ENST00000602557 CCT4P50991 539 aaKnown RBP10.15□□□□□ -0.79
CSMD1-216ENST00000602557 GBP3Q9H0R5 595 aa10.15□□□□□ -0.79
CSMD1-216ENST00000602557 GTF3C6Q969F1 213 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 RBM42Q9BTD8 480 aaKnown RBP10.14□□□□□ -0.79
CSMD1-216ENST00000602557 CCDC69A6NI79 296 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 TANGO6Q9C0B7 1094 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 TBC1D2Q9BYX2 928 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 DNA2P51530 1060 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 LUC7LQ9NQ29 371 aaKnown RBP10.14□□□□□ -0.79
CSMD1-216ENST00000602557 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 CCDC158Q5M9N0 1113 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 CFAP100Q494V2 611 aa10.14□□□□□ -0.79
CSMD1-216ENST00000602557 GBP6Q6ZN66 633 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms