RNA–Protein interactions for RNA: ENST00000602290.1

HCG18-241, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 821 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-241ENST00000602290 ERBB3P21860 1342 aa17.29■□□□□ 0.36
HCG18-241ENST00000602290 MSH5O43196 834 aa17.29■□□□□ 0.36
HCG18-241ENST00000602290 IL2RBP14784 551 aa17.29■□□□□ 0.36
HCG18-241ENST00000602290 PKD1L3Q7Z443 1732 aa17.29■□□□□ 0.36
HCG18-241ENST00000602290 KIAA1210Q9ULL0 1709 aa17.29■□□□□ 0.36
HCG18-241ENST00000602290 TNRC6CQ9HCJ0 1690 aaKnown RBP17.29■□□□□ 0.36
HCG18-241ENST00000602290 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
HCG18-241ENST00000602290 C16orf71Q8IYS4 520 aaPredicted RBP17.27■□□□□ 0.36
HCG18-241ENST00000602290 MPHOSPH9Q99550 1183 aa17.27■□□□□ 0.36
HCG18-241ENST00000602290 CCNL1Q9UK58 526 aaPredicted RBP17.27■□□□□ 0.36
HCG18-241ENST00000602290 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
HCG18-241ENST00000602290 KAT6BQ8WYB5 2073 aa17.24■□□□□ 0.35
HCG18-241ENST00000602290 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
HCG18-241ENST00000602290 SMC1BQ8NDV3 1235 aa17.24■□□□□ 0.35
HCG18-241ENST00000602290 PRDM10Q9NQV6 1147 aa17.23■□□□□ 0.35
HCG18-241ENST00000602290 TAF1LQ8IZX4 1826 aa17.22■□□□□ 0.35
HCG18-241ENST00000602290 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
HCG18-241ENST00000602290 FLAD1Q8NFF5 587 aa17.22■□□□□ 0.35
HCG18-241ENST00000602290 PRIM1P49642 420 aaKnown RBP17.21■□□□□ 0.35
HCG18-241ENST00000602290 BRCA1P38398 1863 aaKnown RBP17.2■□□□□ 0.34
HCG18-241ENST00000602290 C4BP0C0L5 1744 aa17.19■□□□□ 0.34
HCG18-241ENST00000602290 UBR3Q6ZT12 1888 aa17.19■□□□□ 0.34
HCG18-241ENST00000602290 FOXN1O15353 648 aa17.19■□□□□ 0.34
HCG18-241ENST00000602290 NLRP2Q9NX02 1062 aa17.19■□□□□ 0.34
HCG18-241ENST00000602290 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
HCG18-241ENST00000602290 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
HCG18-241ENST00000602290 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
HCG18-241ENST00000602290 SOX12O15370 315 aa17.17■□□□□ 0.34
HCG18-241ENST00000602290 SYTL4Q96C24 671 aaPredicted RBP17.17■□□□□ 0.34
HCG18-241ENST00000602290 USP47Q96K76 1375 aa17.16■□□□□ 0.34
HCG18-241ENST00000602290 RGS19P49795 217 aa17.16■□□□□ 0.34
HCG18-241ENST00000602290 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
HCG18-241ENST00000602290 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
HCG18-241ENST00000602290 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
HCG18-241ENST00000602290 DDX54Q8TDD1 881 aaKnown RBP17.15■□□□□ 0.34
HCG18-241ENST00000602290 ABHD8Q96I13 439 aa17.15■□□□□ 0.34
HCG18-241ENST00000602290 RRAGCQ9HB90 399 aa17.15■□□□□ 0.34
HCG18-241ENST00000602290 CABP2Q9NPB3 220 aa17.15■□□□□ 0.34
HCG18-241ENST00000602290 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
HCG18-241ENST00000602290 ARFGEF1Q9Y6D6 1849 aa17.14■□□□□ 0.34
HCG18-241ENST00000602290 MLLT1Q03111 559 aaPredicted RBP17.14■□□□□ 0.33
HCG18-241ENST00000602290 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
HCG18-241ENST00000602290 FAM208AQ9UK61 1670 aaKnown RBP17.13■□□□□ 0.33
HCG18-241ENST00000602290 NSD3Q9BZ95 1437 aa17.13■□□□□ 0.33
HCG18-241ENST00000602290 LTN1O94822 1766 aa17.12■□□□□ 0.33
HCG18-241ENST00000602290 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
HCG18-241ENST00000602290 TGFB2P61812 414 aa17.11■□□□□ 0.33
HCG18-241ENST00000602290 ANKRD24Q8TF21 1146 aa17.11■□□□□ 0.33
HCG18-241ENST00000602290 SMIM5Q71RC9 77 aa17.1■□□□□ 0.33
HCG18-241ENST00000602290 PALLDQ8WX93 1383 aa17.1■□□□□ 0.33
HCG18-241ENST00000602290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.09■□□□□ 0.33
HCG18-241ENST00000602290 DCAF11Q8TEB1 546 aa17.09■□□□□ 0.33
HCG18-241ENST00000602290 STAC3Q96MF2 364 aa17.09■□□□□ 0.33
HCG18-241ENST00000602290 KDM2AQ9Y2K7 1162 aa17.09■□□□□ 0.33
HCG18-241ENST00000602290 USP31Q70CQ4 1352 aa17.09■□□□□ 0.33
HCG18-241ENST00000602290 TNRC18O15417 2968 aaPredicted RBP17.09■□□□□ 0.33
HCG18-241ENST00000602290 MEGF6O75095 1541 aa17.08■□□□□ 0.32
HCG18-241ENST00000602290 A0A0G2JLW4 131 aa17.08■□□□□ 0.32
HCG18-241ENST00000602290 CTCFP49711 727 aaPredicted RBP17.08■□□□□ 0.32
HCG18-241ENST00000602290 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
HCG18-241ENST00000602290 SSFA2P28290 1259 aa17.07■□□□□ 0.32
HCG18-241ENST00000602290 RNF181Q9P0P0 153 aa17.07■□□□□ 0.32
HCG18-241ENST00000602290 CNTNAP1P78357 1384 aa17.06■□□□□ 0.32
HCG18-241ENST00000602290 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
HCG18-241ENST00000602290 FCHSD2O94868 740 aa17.06■□□□□ 0.32
HCG18-241ENST00000602290 PHF14O94880 888 aa17.06■□□□□ 0.32
HCG18-241ENST00000602290 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
HCG18-241ENST00000602290 AK7Q96M32 723 aa17.06■□□□□ 0.32
HCG18-241ENST00000602290 MON2Q7Z3U7 1717 aa17.05■□□□□ 0.32
HCG18-241ENST00000602290 MMP10P09238 476 aa17.05■□□□□ 0.32
HCG18-241ENST00000602290 DPEP1P16444 411 aa17.05■□□□□ 0.32
HCG18-241ENST00000602290 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
HCG18-241ENST00000602290 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
HCG18-241ENST00000602290 MKRN1Q9UHC7 482 aaKnown RBP17.05■□□□□ 0.32
HCG18-241ENST00000602290 PDE4DIPQ5VU43 2346 aa17.05■□□□□ 0.32
HCG18-241ENST00000602290 SBF1O95248 1867 aa17.05■□□□□ 0.32
HCG18-241ENST00000602290 KCNA3P22001 575 aa17.04■□□□□ 0.32
HCG18-241ENST00000602290 PPARGC1BQ86YN6 1023 aaKnown RBP17.04■□□□□ 0.32
HCG18-241ENST00000602290 MAP2P11137 1827 aaKnown RBP17.03■□□□□ 0.32
HCG18-241ENST00000602290 CENPJQ9HC77 1338 aaPredicted RBP17.03■□□□□ 0.32
HCG18-241ENST00000602290 C4AP0C0L4 1744 aa17.03■□□□□ 0.32
HCG18-241ENST00000602290 LBX1P52954 281 aa17.02■□□□□ 0.32
HCG18-241ENST00000602290 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
HCG18-241ENST00000602290 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
HCG18-241ENST00000602290 ZCRB1Q8TBF4 217 aaKnown RBP17■□□□□ 0.31
HCG18-241ENST00000602290 WBP1LQ9NX94 342 aa17■□□□□ 0.31
HCG18-241ENST00000602290 VIRMAQ69YN4 1812 aaKnown RBP17■□□□□ 0.31
HCG18-241ENST00000602290 HSPA8P11142 646 aaKnown RBP16.99■□□□□ 0.31
HCG18-241ENST00000602290 AIDAQ96BJ3 306 aa16.99■□□□□ 0.31
HCG18-241ENST00000602290 TIAM2Q8IVF5 1701 aa16.99■□□□□ 0.31
HCG18-241ENST00000602290 GLTPD2A6NH11 291 aa16.98■□□□□ 0.31
HCG18-241ENST00000602290 POTECB2RU33 542 aa16.97■□□□□ 0.31
HCG18-241ENST00000602290 LINC00116Q8NCU8 138 aa16.97■□□□□ 0.31
HCG18-241ENST00000602290 KTN1Q86UP2 1357 aaKnown RBP16.96■□□□□ 0.31
HCG18-241ENST00000602290 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
HCG18-241ENST00000602290 CCDC85CA6NKD9 419 aa16.94■□□□□ 0.3
HCG18-241ENST00000602290 NBPF1Q3BBV0 1214 aa16.94■□□□□ 0.3
HCG18-241ENST00000602290 CCDC87Q9NVE4 849 aa16.94■□□□□ 0.3
HCG18-241ENST00000602290 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
HCG18-241ENST00000602290 IP6K1Q92551 441 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms