RNA–Protein interactions for RNA: ENST00000602230.1

BRD4-211, Transcript of bromodomain containing 4, humanhuman

TSL 3

Gene BRD4, Length 751 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-211ENST00000602230 CCDC125Q86Z20 511 aa17.64■□□□□ 0.41
BRD4-211ENST00000602230 DDX54Q8TDD1 881 aaKnown RBP17.64■□□□□ 0.41
BRD4-211ENST00000602230 COL3A1P02461 1466 aaPredicted RBP17.63■□□□□ 0.41
BRD4-211ENST00000602230 U2SURPO15042 1029 aaKnown RBP17.63■□□□□ 0.41
BRD4-211ENST00000602230 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
BRD4-211ENST00000602230 RGPD1P0DJD0 1748 aa17.63■□□□□ 0.41
BRD4-211ENST00000602230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.413e-18■■■■■ 30.2
BRD4-211ENST00000602230 SF3B2Q13435 895 aaKnown RBP17.61■□□□□ 0.41
BRD4-211ENST00000602230 AEBP1Q8IUX7 1158 aa17.61■□□□□ 0.41
BRD4-211ENST00000602230 KDRP35968 1356 aa17.61■□□□□ 0.41
BRD4-211ENST00000602230 PLEKHG2Q9H7P9 1386 aa17.61■□□□□ 0.41
BRD4-211ENST00000602230 ANP32CO43423 234 aa17.6■□□□□ 0.41
BRD4-211ENST00000602230 HMOX1P09601 288 aa17.6■□□□□ 0.41
BRD4-211ENST00000602230 PLEKHO1Q53GL0 409 aaPredicted RBP17.6■□□□□ 0.41
BRD4-211ENST00000602230 PCDH11XQ9BZA7 1347 aa17.6■□□□□ 0.41
BRD4-211ENST00000602230 PCDH11YQ9BZA8 1340 aa17.6■□□□□ 0.41
BRD4-211ENST00000602230 KAT6BQ8WYB5 2073 aa17.59■□□□□ 0.41
BRD4-211ENST00000602230 BCL9O00512 1426 aa17.59■□□□□ 0.41
BRD4-211ENST00000602230 AMOTQ4VCS5 1084 aa17.59■□□□□ 0.41
BRD4-211ENST00000602230 TRIM37O94972 964 aa17.58■□□□□ 0.4
BRD4-211ENST00000602230 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
BRD4-211ENST00000602230 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.4
BRD4-211ENST00000602230 PKD1L3Q7Z443 1732 aa17.57■□□□□ 0.4
BRD4-211ENST00000602230 EP400Q96L91 3159 aa17.56■□□□□ 0.4
BRD4-211ENST00000602230 SHANK3Q9BYB0 1731 aa17.56■□□□□ 0.4
BRD4-211ENST00000602230 IFNL2Q8IZJ0 200 aa17.56■□□□□ 0.4
BRD4-211ENST00000602230 CYP27B1O15528 508 aa17.55■□□□□ 0.4
BRD4-211ENST00000602230 SBF2Q86WG5 1849 aa17.55■□□□□ 0.4
BRD4-211ENST00000602230 FCHSD2O94868 740 aa17.54■□□□□ 0.4
BRD4-211ENST00000602230 ACSBG1Q96GR2 724 aa17.54■□□□□ 0.4
BRD4-211ENST00000602230 BCL11BQ9C0K0 894 aaPredicted RBP17.54■□□□□ 0.4
BRD4-211ENST00000602230 PHKG2P15735 406 aa17.53■□□□□ 0.4
BRD4-211ENST00000602230 BAG6P46379 1132 aa17.53■□□□□ 0.4
BRD4-211ENST00000602230 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
BRD4-211ENST00000602230 ZNF530Q6P9A1 599 aaPredicted RBP17.53■□□□□ 0.4
BRD4-211ENST00000602230 APBA3O96018 575 aa17.52■□□□□ 0.4
BRD4-211ENST00000602230 HSP90AB1P08238 724 aaKnown RBP17.52■□□□□ 0.4
BRD4-211ENST00000602230 NKX1-1Q15270 411 aaPredicted RBP17.52■□□□□ 0.4
BRD4-211ENST00000602230 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
BRD4-211ENST00000602230 PNNQ9H307 717 aaKnown RBP17.52■□□□□ 0.4
BRD4-211ENST00000602230 PRKAR2BP31323 418 aa17.51■□□□□ 0.39
BRD4-211ENST00000602230 KCNQ2O43526 872 aa17.5■□□□□ 0.39
BRD4-211ENST00000602230 NEFMP07197 916 aa17.5■□□□□ 0.39
BRD4-211ENST00000602230 PRIM1P49642 420 aaKnown RBP17.5■□□□□ 0.39
BRD4-211ENST00000602230 SYTL4Q96C24 671 aaPredicted RBP17.5■□□□□ 0.39
BRD4-211ENST00000602230 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
BRD4-211ENST00000602230 MTHFSDQ2M296 383 aaKnown RBP17.49■□□□□ 0.39
BRD4-211ENST00000602230 DEFB132Q7Z7B7 95 aa17.49■□□□□ 0.39
BRD4-211ENST00000602230 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
BRD4-211ENST00000602230 TNS1Q9HBL0 1735 aaKnown RBP17.49■□□□□ 0.39
BRD4-211ENST00000602230 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
BRD4-211ENST00000602230 AKAP4Q5JQC9 854 aa17.48■□□□□ 0.39
BRD4-211ENST00000602230 PTF1AQ7RTS3 328 aa17.48■□□□□ 0.39
BRD4-211ENST00000602230 DCAF5Q96JK2 942 aa17.48■□□□□ 0.39
BRD4-211ENST00000602230 EN1Q05925 392 aaPredicted RBP17.47■□□□□ 0.39
BRD4-211ENST00000602230 PHACTR3Q96KR7 559 aa17.47■□□□□ 0.39
BRD4-211ENST00000602230 DOT1LQ8TEK3 1739 aa17.47■□□□□ 0.39
BRD4-211ENST00000602230 PLSCR1O15162 318 aa17.46■□□□□ 0.39
BRD4-211ENST00000602230 ERVV-2B6SEH9 535 aa17.45■□□□□ 0.38
BRD4-211ENST00000602230 MPRIPQ6WCQ1 1025 aa17.45■□□□□ 0.38
BRD4-211ENST00000602230 CAMKK2Q96RR4 588 aa17.44■□□□□ 0.38
BRD4-211ENST00000602230 PLEKHF1Q96S99 279 aa17.44■□□□□ 0.38
BRD4-211ENST00000602230 MRS2Q9HD23 443 aa17.44■□□□□ 0.38
BRD4-211ENST00000602230 TMOD3Q9NYL9 352 aa17.44■□□□□ 0.38
BRD4-211ENST00000602230 BTAF1O14981 1849 aa17.44■□□□□ 0.38
BRD4-211ENST00000602230 MAPK8IP3Q9UPT6 1336 aa17.44■□□□□ 0.38
BRD4-211ENST00000602230 ITGB4P16144 1822 aa17.43■□□□□ 0.38
BRD4-211ENST00000602230 GNAT3A8MTJ3 354 aa17.43■□□□□ 0.38
BRD4-211ENST00000602230 EZH2Q15910 746 aaKnown RBP17.43■□□□□ 0.38
BRD4-211ENST00000602230 CCDC184Q52MB2 194 aa17.43■□□□□ 0.38
BRD4-211ENST00000602230 TOGARAM1Q9Y4F4 1720 aa17.42■□□□□ 0.38
BRD4-211ENST00000602230 CABP4P57796 275 aa17.42■□□□□ 0.38
BRD4-211ENST00000602230 DIEXFQ68CQ4 756 aaKnown RBP17.42■□□□□ 0.38
BRD4-211ENST00000602230 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
BRD4-211ENST00000602230 MAP3K5Q99683 1374 aa17.41■□□□□ 0.38
BRD4-211ENST00000602230 KDM6AO15550 1401 aaPredicted RBP17.41■□□□□ 0.38
BRD4-211ENST00000602230 RNMTO43148 476 aaKnown RBP17.41■□□□□ 0.38
BRD4-211ENST00000602230 PIGBQ92521 554 aa17.41■□□□□ 0.38
BRD4-211ENST00000602230 LGR6Q9HBX8 967 aa17.4■□□□□ 0.38
BRD4-211ENST00000602230 SCN11AQ9UI33 1791 aa17.4■□□□□ 0.38
BRD4-211ENST00000602230 RGPD3A6NKT7 1758 aaPredicted RBP17.39■□□□□ 0.37
BRD4-211ENST00000602230 RGPD4Q7Z3J3 1758 aa17.39■□□□□ 0.37
BRD4-211ENST00000602230 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
BRD4-211ENST00000602230 RTF1Q92541 710 aaKnown RBP17.39■□□□□ 0.37
BRD4-211ENST00000602230 SMARCC1Q92922 1105 aaPredicted RBP17.39■□□□□ 0.37
BRD4-211ENST00000602230 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
BRD4-211ENST00000602230 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
BRD4-211ENST00000602230 TXNRD1Q16881 649 aa17.38■□□□□ 0.37
BRD4-211ENST00000602230 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
BRD4-211ENST00000602230 NFATC2IPQ8NCF5 419 aa17.38■□□□□ 0.37
BRD4-211ENST00000602230 PNISRQ8TF01 805 aaKnown RBP17.38■□□□□ 0.37
BRD4-211ENST00000602230 VIRMAQ69YN4 1812 aaKnown RBP17.37■□□□□ 0.37
BRD4-211ENST00000602230 IL17REQ8NFR9 667 aa17.37■□□□□ 0.37
BRD4-211ENST00000602230 SLC52A2Q9HAB3 445 aa17.37■□□□□ 0.37
BRD4-211ENST00000602230 TEFQ10587 303 aa17.36■□□□□ 0.37
BRD4-211ENST00000602230 SLC27A3Q5K4L6 730 aa17.36■□□□□ 0.37
BRD4-211ENST00000602230 PROM2Q8N271 834 aa17.36■□□□□ 0.37
BRD4-211ENST00000602230 ATG3Q9NT62 314 aa17.35■□□□□ 0.37
BRD4-211ENST00000602230 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
BRD4-211ENST00000602230 ADAMTS7Q9UKP4 1686 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms