RNA–Protein interactions for RNA: ENST00000599040.5

FARP1-226, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-226ENST00000599040 MIER1Q8N108 512 aa12.71□□□□□ -0.37
FARP1-226ENST00000599040 PROM2Q8N271 834 aa12.71□□□□□ -0.37
FARP1-226ENST00000599040 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
FARP1-226ENST00000599040 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.37
FARP1-226ENST00000599040 INSRP06213 1382 aa12.7□□□□□ -0.38
FARP1-226ENST00000599040 CASZ1Q86V15 1759 aa12.7□□□□□ -0.38
FARP1-226ENST00000599040 RGPD2P0DJD1 1756 aa12.69□□□□□ -0.38
FARP1-226ENST00000599040 FBLN1P23142 703 aa12.69□□□□□ -0.38
FARP1-226ENST00000599040 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
FARP1-226ENST00000599040 SLC27A3Q5K4L6 730 aa12.69□□□□□ -0.38
FARP1-226ENST00000599040 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
FARP1-226ENST00000599040 SYTL4Q96C24 671 aaPredicted RBP12.68□□□□□ -0.38
FARP1-226ENST00000599040 MEGF6O75095 1541 aa12.67□□□□□ -0.38
FARP1-226ENST00000599040 NBPF6Q5VWK0 638 aa12.67□□□□□ -0.38
FARP1-226ENST00000599040 NBPF4Q96M43 638 aa12.67□□□□□ -0.38
FARP1-226ENST00000599040 CARD14Q9BXL6 1004 aa12.67□□□□□ -0.38
FARP1-226ENST00000599040 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
FARP1-226ENST00000599040 PCDH11XQ9BZA7 1347 aa12.66□□□□□ -0.38
FARP1-226ENST00000599040 PCDH11YQ9BZA8 1340 aa12.66□□□□□ -0.38
FARP1-226ENST00000599040 ZBTB7AO95365 584 aa12.66□□□□□ -0.38
FARP1-226ENST00000599040 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
FARP1-226ENST00000599040 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
FARP1-226ENST00000599040 PAPPAQ13219 1627 aa12.66□□□□□ -0.38
FARP1-226ENST00000599040 SHANK3Q9BYB0 1731 aa12.65□□□□□ -0.38
FARP1-226ENST00000599040 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
FARP1-226ENST00000599040 PPM1GO15355 546 aaPredicted RBP12.65□□□□□ -0.38
FARP1-226ENST00000599040 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
FARP1-226ENST00000599040 USHBP1Q8N6Y0 703 aa12.65□□□□□ -0.38
FARP1-226ENST00000599040 ANKRD26Q9UPS8 1709 aa12.65□□□□□ -0.38
FARP1-226ENST00000599040 EMILIN1Q9Y6C2 1016 aa12.64□□□□□ -0.39
FARP1-226ENST00000599040 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
FARP1-226ENST00000599040 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
FARP1-226ENST00000599040 NSD2O96028 1365 aa12.63□□□□□ -0.39
FARP1-226ENST00000599040 LY75O60449 1722 aa12.62□□□□□ -0.39
FARP1-226ENST00000599040 QSER1Q2KHR3 1735 aa12.62□□□□□ -0.39
FARP1-226ENST00000599040 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
FARP1-226ENST00000599040 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
FARP1-226ENST00000599040 LRRC4BQ9NT99 713 aa12.62□□□□□ -0.39
FARP1-226ENST00000599040 SPG7Q9UQ90 795 aa12.62□□□□□ -0.39
FARP1-226ENST00000599040 PTGER2P43116 358 aa12.61□□□□□ -0.39
FARP1-226ENST00000599040 ZNF827Q17R98 1081 aa12.61□□□□□ -0.39
FARP1-226ENST00000599040 TFCP2L1Q9NZI6 479 aa12.61□□□□□ -0.39
FARP1-226ENST00000599040 CCNL1Q9UK58 526 aaPredicted RBP12.61□□□□□ -0.39
FARP1-226ENST00000599040 KNSTRNQ9Y448 316 aa12.61□□□□□ -0.39
FARP1-226ENST00000599040 PKD1L3Q7Z443 1732 aa12.6□□□□□ -0.39
FARP1-226ENST00000599040 PLEKHG2Q9H7P9 1386 aa12.6□□□□□ -0.39
FARP1-226ENST00000599040 POLD1P28340 1107 aa12.6□□□□□ -0.39
FARP1-226ENST00000599040 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
FARP1-226ENST00000599040 NCAPD2Q15021 1401 aa12.6□□□□□ -0.39
FARP1-226ENST00000599040 RALBP1Q15311 655 aa12.59□□□□□ -0.39
FARP1-226ENST00000599040 ARXQ96QS3 562 aa12.59□□□□□ -0.39
FARP1-226ENST00000599040 PANK3Q9H999 370 aa12.59□□□□□ -0.39
FARP1-226ENST00000599040 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.396e-20■□□□□ 8.7
FARP1-226ENST00000599040 POLKQ9UBT6 870 aa12.59□□□□□ -0.39
FARP1-226ENST00000599040 CENPBP07199 599 aaPredicted RBP12.58□□□□□ -0.4
FARP1-226ENST00000599040 TNNT2P45379 298 aaPredicted RBP12.58□□□□□ -0.4
FARP1-226ENST00000599040 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.4
FARP1-226ENST00000599040 PRKRIP1Q9H875 184 aaPredicted RBP12.58□□□□□ -0.4
FARP1-226ENST00000599040 CYP27B1O15528 508 aa12.57□□□□□ -0.4
FARP1-226ENST00000599040 YY1P25490 414 aa12.57□□□□□ -0.4
FARP1-226ENST00000599040 MPRIPQ6WCQ1 1025 aa12.57□□□□□ -0.4
FARP1-226ENST00000599040 EYA1Q99502 592 aa12.57□□□□□ -0.4
FARP1-226ENST00000599040 SGIP1Q9BQI5 828 aa12.57□□□□□ -0.4
FARP1-226ENST00000599040 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
FARP1-226ENST00000599040 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
FARP1-226ENST00000599040 MAP3K5Q99683 1374 aa12.56□□□□□ -0.4
FARP1-226ENST00000599040 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
FARP1-226ENST00000599040 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
FARP1-226ENST00000599040 SYT17Q9BSW7 474 aa12.56□□□□□ -0.4
FARP1-226ENST00000599040 PNPLA7Q6ZV29 1317 aa12.56□□□□□ -0.4
FARP1-226ENST00000599040 UTRNP46939 3433 aa12.56□□□□□ -0.4
FARP1-226ENST00000599040 ITGB4P16144 1822 aa12.55□□□□□ -0.4
FARP1-226ENST00000599040 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
FARP1-226ENST00000599040 C5P01031 1676 aa12.55□□□□□ -0.4
FARP1-226ENST00000599040 MSH5O43196 834 aa12.55□□□□□ -0.4
FARP1-226ENST00000599040 EIF4A2Q14240 407 aaKnown RBP12.55□□□□□ -0.4
FARP1-226ENST00000599040 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
FARP1-226ENST00000599040 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
FARP1-226ENST00000599040 HSP90AB1P08238 724 aaKnown RBP12.54□□□□□ -0.4
FARP1-226ENST00000599040 KCNQ4P56696 695 aa12.54□□□□□ -0.4
FARP1-226ENST00000599040 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
FARP1-226ENST00000599040 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
FARP1-226ENST00000599040 IGSF1Q8N6C5 1336 aa12.53□□□□□ -0.4
FARP1-226ENST00000599040 MYBBP1AQ9BQG0 1328 aaKnown RBP12.53□□□□□ -0.4
FARP1-226ENST00000599040 COL24A1Q17RW2 1714 aa12.53□□□□□ -0.4
FARP1-226ENST00000599040 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
FARP1-226ENST00000599040 PHKG2P15735 406 aa12.52□□□□□ -0.41
FARP1-226ENST00000599040 CNGB1Q14028 1251 aaPredicted RBP12.52□□□□□ -0.41
FARP1-226ENST00000599040 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
FARP1-226ENST00000599040 AK7Q96M32 723 aa12.52□□□□□ -0.41
FARP1-226ENST00000599040 MRS2Q9HD23 443 aa12.52□□□□□ -0.41
FARP1-226ENST00000599040 TAF1LQ8IZX4 1826 aa12.52□□□□□ -0.41
FARP1-226ENST00000599040 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
FARP1-226ENST00000599040 PLEKHO1Q53GL0 409 aaPredicted RBP12.51□□□□□ -0.41
FARP1-226ENST00000599040 PIGBQ92521 554 aa12.51□□□□□ -0.41
FARP1-226ENST00000599040 YTHDC1Q96MU7 727 aaKnown RBP12.51□□□□□ -0.41
FARP1-226ENST00000599040 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
FARP1-226ENST00000599040 C4BP0C0L5 1744 aa12.5□□□□□ -0.41
FARP1-226ENST00000599040 GOLGB1Q14789 3259 aaKnown RBP12.5□□□□□ -0.41
FARP1-226ENST00000599040 CHD4Q14839 1912 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms