RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 LAS1LQ9Y4W2 734 aaKnown RBP30.35■■■□□ 2.45
SYMPK-212ENST00000598896 TOM1L2Q6ZVM7 507 aa30.34■■■□□ 2.45
SYMPK-212ENST00000598896 IFT57Q9NWB7 429 aa30.34■■■□□ 2.45
SYMPK-212ENST00000598896 CRB1P82279 1406 aa30.34■■■□□ 2.45
SYMPK-212ENST00000598896 FKBP8Q14318 412 aa30.33■■■□□ 2.45
SYMPK-212ENST00000598896 PLEKHO1Q53GL0 409 aaPredicted RBP30.33■■■□□ 2.45
SYMPK-212ENST00000598896 LARP1Q6PKG0 1096 aaKnown RBP30.33■■■□□ 2.45
SYMPK-212ENST00000598896 RTF1Q92541 710 aaKnown RBP30.33■■■□□ 2.45
SYMPK-212ENST00000598896 ADAMTS2O95450 1211 aa30.33■■■□□ 2.45
SYMPK-212ENST00000598896 NEFLP07196 543 aa30.33■■■□□ 2.45
SYMPK-212ENST00000598896 IRX6P78412 446 aaPredicted RBP30.33■■■□□ 2.45
SYMPK-212ENST00000598896 AMOTQ4VCS5 1084 aa30.33■■■□□ 2.45
SYMPK-212ENST00000598896 RAPGEF4Q8WZA2 1011 aa30.33■■■□□ 2.45
SYMPK-212ENST00000598896 PLCH1Q4KWH8 1693 aa30.33■■■□□ 2.45
SYMPK-212ENST00000598896 HTATSF1O43719 755 aaKnown RBP30.32■■■□□ 2.44
SYMPK-212ENST00000598896 CFAP44Q96MT7 982 aa30.32■■■□□ 2.44
SYMPK-212ENST00000598896 GNAI1P63096 354 aa30.31■■■□□ 2.44
SYMPK-212ENST00000598896 JCADQ9P266 1359 aa30.31■■■□□ 2.44
SYMPK-212ENST00000598896 NUTM2BA6NNL0 878 aaPredicted RBP30.31■■■□□ 2.44
SYMPK-212ENST00000598896 NUTM2EB1AL46 878 aaPredicted RBP30.31■■■□□ 2.44
SYMPK-212ENST00000598896 EVA1CP58658 441 aa30.31■■■□□ 2.44
SYMPK-212ENST00000598896 NUTM2AQ8IVF1 878 aaPredicted RBP30.31■■■□□ 2.44
SYMPK-212ENST00000598896 EXOSC9Q06265 439 aaKnown RBP30.3■■■□□ 2.44
SYMPK-212ENST00000598896 ZNF530Q6P9A1 599 aaPredicted RBP30.3■■■□□ 2.44
SYMPK-212ENST00000598896 MBIPQ9NS73 344 aa30.3■■■□□ 2.44
SYMPK-212ENST00000598896 TATP17735 454 aaPredicted RBP30.29■■■□□ 2.44
SYMPK-212ENST00000598896 RRP1P56182 461 aaKnown RBP30.29■■■□□ 2.44
SYMPK-212ENST00000598896 IL17REQ8NFR9 667 aa30.29■■■□□ 2.44
SYMPK-212ENST00000598896 CARD10Q9BWT7 1032 aa30.29■■■□□ 2.44
SYMPK-212ENST00000598896 PKD1L3Q7Z443 1732 aa30.28■■■□□ 2.44
SYMPK-212ENST00000598896 PARP4Q9UKK3 1724 aaKnown RBP30.27■■■□□ 2.44
SYMPK-212ENST00000598896 AKAP4Q5JQC9 854 aa30.27■■■□□ 2.44
SYMPK-212ENST00000598896 PLEKHG2Q9H7P9 1386 aa30.27■■■□□ 2.44
SYMPK-212ENST00000598896 VIRMAQ69YN4 1812 aaKnown RBP30.26■■■□□ 2.43
SYMPK-212ENST00000598896 OVOS2A0A0G2JMS6 1433 aa30.26■■■□□ 2.43
SYMPK-212ENST00000598896 NRAPQ86VF7 1730 aa30.25■■■□□ 2.43
SYMPK-212ENST00000598896 CEMIPQ8WUJ3 1361 aa30.25■■■□□ 2.43
SYMPK-212ENST00000598896 CHL1O00533 1208 aa30.24■■■□□ 2.43
SYMPK-212ENST00000598896 HSPA1LP34931 641 aa30.23■■■□□ 2.43
SYMPK-212ENST00000598896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.23■■■□□ 2.43
SYMPK-212ENST00000598896 BCAR3O75815 825 aa30.23■■■□□ 2.43
SYMPK-212ENST00000598896 C1orf141Q5JVX7 400 aa30.23■■■□□ 2.43
SYMPK-212ENST00000598896 LGR6Q9HBX8 967 aa30.22■■■□□ 2.43
SYMPK-212ENST00000598896 PLIN1O60240 522 aa30.21■■■□□ 2.43
SYMPK-212ENST00000598896 ADAMTS7Q9UKP4 1686 aa30.21■■■□□ 2.43
SYMPK-212ENST00000598896 RARSP54136 660 aaKnown RBP30.21■■■□□ 2.43
SYMPK-212ENST00000598896 USP35Q9P2H5 1018 aa30.21■■■□□ 2.43
SYMPK-212ENST00000598896 SPG7Q9UQ90 795 aa30.21■■■□□ 2.43
SYMPK-212ENST00000598896 CT47B1P0C2W7 299 aaPredicted RBP30.2■■■□□ 2.42
SYMPK-212ENST00000598896 MPRIPQ6WCQ1 1025 aa30.2■■■□□ 2.42
SYMPK-212ENST00000598896 MIS18AQ9NYP9 233 aa30.19■■■□□ 2.42
SYMPK-212ENST00000598896 NWD2Q9ULI1 1742 aa30.19■■■□□ 2.42
SYMPK-212ENST00000598896 SLIT2O94813 1529 aa30.18■■■□□ 2.42
SYMPK-212ENST00000598896 LRP6O75581 1613 aa30.18■■■□□ 2.42
SYMPK-212ENST00000598896 IL2RBP14784 551 aa30.18■■■□□ 2.42
SYMPK-212ENST00000598896 TSPYL6Q8N831 410 aa30.17■■■□□ 2.42
SYMPK-212ENST00000598896 SHANK3Q9BYB0 1731 aa30.17■■■□□ 2.42
SYMPK-212ENST00000598896 PHKG2P15735 406 aa30.16■■■□□ 2.42
SYMPK-212ENST00000598896 SPATA31A6Q5VVP1 1343 aa30.16■■■□□ 2.42
SYMPK-212ENST00000598896 CYP27B1O15528 508 aa30.16■■■□□ 2.42
SYMPK-212ENST00000598896 RNMTO43148 476 aaKnown RBP30.15■■■□□ 2.42
SYMPK-212ENST00000598896 C8orf58Q8NAV2 365 aa30.15■■■□□ 2.42
SYMPK-212ENST00000598896 BCL2L13Q9BXK5 485 aa30.15■■■□□ 2.42
SYMPK-212ENST00000598896 TSPYL4Q9UJ04 414 aa30.15■■■□□ 2.42
SYMPK-212ENST00000598896 KDM6AO15550 1401 aaPredicted RBP30.15■■■□□ 2.42
SYMPK-212ENST00000598896 SCN11AQ9UI33 1791 aa30.14■■■□□ 2.42
SYMPK-212ENST00000598896 TAF7Q15545 349 aaPredicted RBP30.13■■■□□ 2.41
SYMPK-212ENST00000598896 KRT24Q2M2I5 525 aa30.13■■■□□ 2.41
SYMPK-212ENST00000598896 IFNL2Q8IZJ0 200 aa30.13■■■□□ 2.41
SYMPK-212ENST00000598896 ELL2O00472 640 aaPredicted RBP30.12■■■□□ 2.41
SYMPK-212ENST00000598896 SIPA1L3O60292 1781 aaPredicted RBP30.12■■■□□ 2.41
SYMPK-212ENST00000598896 WNK3Q9BYP7 1800 aa30.12■■■□□ 2.41
SYMPK-212ENST00000598896 VAMP4O75379 141 aa30.12■■■□□ 2.41
SYMPK-212ENST00000598896 DISP2A7MBM2 1401 aa30.12■■■□□ 2.41
SYMPK-212ENST00000598896 TWISTNBQ3B726 338 aaPredicted RBP30.11■■■□□ 2.41
SYMPK-212ENST00000598896 ZCRB1Q8TBF4 217 aaKnown RBP30.11■■■□□ 2.41
SYMPK-212ENST00000598896 C8orf37Q96NL8 207 aa30.1■■■□□ 2.41
SYMPK-212ENST00000598896 SSH1Q8WYL5 1049 aa30.1■■■□□ 2.41
SYMPK-212ENST00000598896 KDM3BQ7LBC6 1761 aa30.09■■■□□ 2.41
SYMPK-212ENST00000598896 C20orf194Q5TEA3 1177 aa30.09■■■□□ 2.41
SYMPK-212ENST00000598896 PCDH11XQ9BZA7 1347 aa30.09■■■□□ 2.41
SYMPK-212ENST00000598896 PCDH11YQ9BZA8 1340 aa30.09■■■□□ 2.41
SYMPK-212ENST00000598896 TEFQ10587 303 aa30.08■■■□□ 2.41
SYMPK-212ENST00000598896 BABAM1Q9NWV8 329 aa30.08■■■□□ 2.41
SYMPK-212ENST00000598896 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.07■■■□□ 2.4
SYMPK-212ENST00000598896 SPATA31A1Q5TZJ5 1347 aa30.07■■■□□ 2.4
SYMPK-212ENST00000598896 BCL9LQ86UU0 1499 aa30.07■■■□□ 2.4
SYMPK-212ENST00000598896 ZNF428Q96B54 188 aa30.06■■■□□ 2.4
SYMPK-212ENST00000598896 NGLY1Q96IV0 654 aa30.06■■■□□ 2.4
SYMPK-212ENST00000598896 SMC4Q9NTJ3 1288 aa30.06■■■□□ 2.4
SYMPK-212ENST00000598896 DCAF5Q96JK2 942 aa30.04■■■□□ 2.4
SYMPK-212ENST00000598896 MRC1P22897 1456 aa30.04■■■□□ 2.4
SYMPK-212ENST00000598896 ALDH1L2Q3SY69 923 aa30.04■■■□□ 2.4
SYMPK-212ENST00000598896 ERICH6BQ5W0A0 696 aa30.04■■■□□ 2.4
SYMPK-212ENST00000598896 FRAT1Q92837 279 aaPredicted RBP30.04■■■□□ 2.4
SYMPK-212ENST00000598896 UNC5CLQ8IV45 518 aa30.03■■■□□ 2.4
SYMPK-212ENST00000598896 SPATA31A5Q5VU36 1347 aa30.03■■■□□ 2.4
SYMPK-212ENST00000598896 SPATA31A7Q8IWB4 1347 aa30.03■■■□□ 2.4
SYMPK-212ENST00000598896 BTBD11A6QL63 1104 aa30.02■■■□□ 2.4
SYMPK-212ENST00000598896 HSP90AB1P08238 724 aaKnown RBP30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms