RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 KDRP35968 1356 aa25.9■■□□□ 1.74
PNKP-207ENST00000596014 NUDCQ9Y266 331 aa25.9■■□□□ 1.74
PNKP-207ENST00000596014 ZCRB1Q8TBF4 217 aaKnown RBP25.89■■□□□ 1.73
PNKP-207ENST00000596014 MARCH10Q8NA82 808 aaPredicted RBP25.88■■□□□ 1.73
PNKP-207ENST00000596014 HMOX1P09601 288 aa25.87■■□□□ 1.73
PNKP-207ENST00000596014 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
PNKP-207ENST00000596014 SHANK3Q9BYB0 1731 aa25.85■■□□□ 1.73
PNKP-207ENST00000596014 DDX54Q8TDD1 881 aaKnown RBP25.84■■□□□ 1.73
PNKP-207ENST00000596014 PKD1L3Q7Z443 1732 aa25.84■■□□□ 1.73
PNKP-207ENST00000596014 FAM196AQ6ZSG2 479 aa25.83■■□□□ 1.73
PNKP-207ENST00000596014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.83■■□□□ 1.73
PNKP-207ENST00000596014 U2AF1L5P0DN76 240 aaPredicted RBP25.83■■□□□ 1.73
PNKP-207ENST00000596014 U2AF1Q01081 240 aaKnown RBP eCLIP25.83■■□□□ 1.739e-9■■■■■ 30
PNKP-207ENST00000596014 SPG7Q9UQ90 795 aa25.82■■□□□ 1.72
PNKP-207ENST00000596014 PLEKHG2Q9H7P9 1386 aa25.82■■□□□ 1.72
PNKP-207ENST00000596014 PCDH11XQ9BZA7 1347 aa25.79■■□□□ 1.72
PNKP-207ENST00000596014 PCDH11YQ9BZA8 1340 aa25.79■■□□□ 1.72
PNKP-207ENST00000596014 PLEKHO1Q53GL0 409 aaPredicted RBP25.79■■□□□ 1.72
PNKP-207ENST00000596014 KAT6BQ8WYB5 2073 aa25.79■■□□□ 1.72
PNKP-207ENST00000596014 CYP27B1O15528 508 aa25.78■■□□□ 1.72
PNKP-207ENST00000596014 AMOTQ4VCS5 1084 aa25.78■■□□□ 1.72
PNKP-207ENST00000596014 SOCS7O14512 581 aa25.77■■□□□ 1.72
PNKP-207ENST00000596014 RSPH6AQ9H0K4 717 aa25.77■■□□□ 1.72
PNKP-207ENST00000596014 BCL9O00512 1426 aa25.77■■□□□ 1.72
PNKP-207ENST00000596014 FCHSD2O94868 740 aa25.77■■□□□ 1.72
PNKP-207ENST00000596014 UPF1Q92900 1129 aaKnown RBP eCLIP25.77■■□□□ 1.72
PNKP-207ENST00000596014 SBF2Q86WG5 1849 aa25.77■■□□□ 1.72
PNKP-207ENST00000596014 CCDC184Q52MB2 194 aa25.76■■□□□ 1.71
PNKP-207ENST00000596014 PRKAR2BP31323 418 aa25.74■■□□□ 1.71
PNKP-207ENST00000596014 IFNL2Q8IZJ0 200 aa25.74■■□□□ 1.71
PNKP-207ENST00000596014 PHKG2P15735 406 aa25.73■■□□□ 1.71
PNKP-207ENST00000596014 TRIM37O94972 964 aa25.72■■□□□ 1.71
PNKP-207ENST00000596014 ZNF530Q6P9A1 599 aaPredicted RBP25.72■■□□□ 1.71
PNKP-207ENST00000596014 CCDC125Q86Z20 511 aa25.71■■□□□ 1.71
PNKP-207ENST00000596014 PHACTR3Q96KR7 559 aa25.71■■□□□ 1.71
PNKP-207ENST00000596014 WDR43Q15061 677 aaKnown RBP eCLIP25.71■■□□□ 1.71
PNKP-207ENST00000596014 NKX1-1Q15270 411 aaPredicted RBP25.71■■□□□ 1.71
PNKP-207ENST00000596014 MTHFSDQ2M296 383 aaKnown RBP25.71■■□□□ 1.71
PNKP-207ENST00000596014 ACSBG1Q96GR2 724 aa25.7■■□□□ 1.7
PNKP-207ENST00000596014 MRS2Q9HD23 443 aa25.69■■□□□ 1.7
PNKP-207ENST00000596014 C1orf141Q5JVX7 400 aa25.68■■□□□ 1.7
PNKP-207ENST00000596014 KCNQ2O43526 872 aa25.68■■□□□ 1.7
PNKP-207ENST00000596014 PTF1AQ7RTS3 328 aa25.68■■□□□ 1.7
PNKP-207ENST00000596014 PNNQ9H307 717 aaKnown RBP25.68■■□□□ 1.7
PNKP-207ENST00000596014 PLEKHF1Q96S99 279 aa25.67■■□□□ 1.7
PNKP-207ENST00000596014 BCL11BQ9C0K0 894 aaPredicted RBP25.67■■□□□ 1.7
PNKP-207ENST00000596014 ADAMTS8Q9UP79 889 aa25.67■■□□□ 1.7
PNKP-207ENST00000596014 DOT1LQ8TEK3 1739 aa25.67■■□□□ 1.7
PNKP-207ENST00000596014 NHSQ6T4R5 1651 aa25.66■■□□□ 1.7
PNKP-207ENST00000596014 TNS1Q9HBL0 1735 aaKnown RBP25.66■■□□□ 1.7
PNKP-207ENST00000596014 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
PNKP-207ENST00000596014 SF3B2Q13435 895 aaKnown RBP25.65■■□□□ 1.7
PNKP-207ENST00000596014 AKAP4Q5JQC9 854 aa25.65■■□□□ 1.7
PNKP-207ENST00000596014 GAS2L2Q8NHY3 880 aa25.65■■□□□ 1.7
PNKP-207ENST00000596014 PRIM1P49642 420 aaKnown RBP25.64■■□□□ 1.7
PNKP-207ENST00000596014 NEFMP07197 916 aa25.64■■□□□ 1.69
PNKP-207ENST00000596014 PNISRQ8TF01 805 aaKnown RBP25.64■■□□□ 1.69
PNKP-207ENST00000596014 DCAF5Q96JK2 942 aa25.64■■□□□ 1.69
PNKP-207ENST00000596014 TOGARAM1Q9Y4F4 1720 aa25.63■■□□□ 1.69
PNKP-207ENST00000596014 SYTL4Q96C24 671 aaPredicted RBP25.63■■□□□ 1.69
PNKP-207ENST00000596014 MPRIPQ6WCQ1 1025 aa25.62■■□□□ 1.69
PNKP-207ENST00000596014 ITGB4P16144 1822 aa25.62■■□□□ 1.69
PNKP-207ENST00000596014 APBA3O96018 575 aa25.61■■□□□ 1.69
PNKP-207ENST00000596014 KDM6AO15550 1401 aaPredicted RBP25.6■■□□□ 1.69
PNKP-207ENST00000596014 MAPK8IP3Q9UPT6 1336 aa25.6■■□□□ 1.69
PNKP-207ENST00000596014 BTAF1O14981 1849 aa25.6■■□□□ 1.69
PNKP-207ENST00000596014 VIRMAQ69YN4 1812 aaKnown RBP25.6■■□□□ 1.69
PNKP-207ENST00000596014 CCDC146Q8IYE0 955 aa25.59■■□□□ 1.69
PNKP-207ENST00000596014 SCN11AQ9UI33 1791 aa25.59■■□□□ 1.69
PNKP-207ENST00000596014 GNAT3A8MTJ3 354 aa25.58■■□□□ 1.69
PNKP-207ENST00000596014 DEFB132Q7Z7B7 95 aa25.58■■□□□ 1.69
PNKP-207ENST00000596014 MAP3K5Q99683 1374 aa25.58■■□□□ 1.69
PNKP-207ENST00000596014 ERVV-2B6SEH9 535 aa25.58■■□□□ 1.68
PNKP-207ENST00000596014 BAG6P46379 1132 aa25.58■■□□□ 1.68
PNKP-207ENST00000596014 MIER1Q8N108 512 aa25.57■■□□□ 1.68
PNKP-207ENST00000596014 RUNDC1Q96C34 613 aa25.57■■□□□ 1.68
PNKP-207ENST00000596014 LGR6Q9HBX8 967 aa25.57■■□□□ 1.68
PNKP-207ENST00000596014 DLG5Q8TDM6 1919 aa25.56■■□□□ 1.68
PNKP-207ENST00000596014 CCER2I3L3R5 266 aa25.56■■□□□ 1.68
PNKP-207ENST00000596014 EN1Q05925 392 aaPredicted RBP25.55■■□□□ 1.68
PNKP-207ENST00000596014 NFE2L2Q16236 605 aa25.55■■□□□ 1.68
PNKP-207ENST00000596014 ADAMTS7Q9UKP4 1686 aa25.55■■□□□ 1.68
PNKP-207ENST00000596014 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
PNKP-207ENST00000596014 PIGBQ92521 554 aa25.55■■□□□ 1.68
PNKP-207ENST00000596014 TMOD3Q9NYL9 352 aa25.55■■□□□ 1.68
PNKP-207ENST00000596014 PLSCR1O15162 318 aa25.54■■□□□ 1.68
PNKP-207ENST00000596014 IL17REQ8NFR9 667 aa25.54■■□□□ 1.68
PNKP-207ENST00000596014 CABP4P57796 275 aa25.53■■□□□ 1.68
PNKP-207ENST00000596014 NFATC2IPQ8NCF5 419 aa25.52■■□□□ 1.68
PNKP-207ENST00000596014 CAMKK2Q96RR4 588 aa25.52■■□□□ 1.68
PNKP-207ENST00000596014 HTATSF1O43719 755 aaKnown RBP25.51■■□□□ 1.67
PNKP-207ENST00000596014 TMPOP42166 694 aaKnown RBP25.51■■□□□ 1.67
PNKP-207ENST00000596014 RTF1Q92541 710 aaKnown RBP25.51■■□□□ 1.67
PNKP-207ENST00000596014 EZH2Q15910 746 aaKnown RBP25.5■■□□□ 1.67
PNKP-207ENST00000596014 FAM9BQ8IZU0 186 aa25.5■■□□□ 1.67
PNKP-207ENST00000596014 SLC52A2Q9HAB3 445 aa25.49■■□□□ 1.67
PNKP-207ENST00000596014 RGPD3A6NKT7 1758 aaPredicted RBP25.49■■□□□ 1.67
PNKP-207ENST00000596014 RGPD4Q7Z3J3 1758 aa25.49■■□□□ 1.67
PNKP-207ENST00000596014 RIPK4P57078 832 aa25.48■■□□□ 1.67
PNKP-207ENST00000596014 CEMIPQ8WUJ3 1361 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 1392 ms