RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 DDX54Q8TDD1 881 aaKnown RBP24.85■■□□□ 1.57
HOMER3-208ENST00000595756 NBPF6Q5VWK0 638 aa24.84■■□□□ 1.57
HOMER3-208ENST00000595756 NBPF4Q96M43 638 aa24.84■■□□□ 1.57
HOMER3-208ENST00000595756 PPP1R1BQ9UD71 204 aaPredicted RBP24.84■■□□□ 1.57
HOMER3-208ENST00000595756 PKD1L3Q7Z443 1732 aa24.83■■□□□ 1.57
HOMER3-208ENST00000595756 ZCRB1Q8TBF4 217 aaKnown RBP24.82■■□□□ 1.56
HOMER3-208ENST00000595756 PDGFDQ9GZP0 370 aaPredicted RBP24.82■■□□□ 1.56
HOMER3-208ENST00000595756 NSD2O96028 1365 aa24.81■■□□□ 1.56
HOMER3-208ENST00000595756 NCAPD2Q15021 1401 aa24.81■■□□□ 1.56
HOMER3-208ENST00000595756 MAP2P11137 1827 aaKnown RBP24.81■■□□□ 1.56
HOMER3-208ENST00000595756 HSP90AB2PQ58FF8 381 aa24.8■■□□□ 1.56
HOMER3-208ENST00000595756 USHBP1Q8N6Y0 703 aa24.79■■□□□ 1.56
HOMER3-208ENST00000595756 RAPGEF4Q8WZA2 1011 aa24.79■■□□□ 1.56
HOMER3-208ENST00000595756 TUBGCP6Q96RT7 1819 aa24.79■■□□□ 1.56
HOMER3-208ENST00000595756 ZBTB7AO95365 584 aa24.78■■□□□ 1.56
HOMER3-208ENST00000595756 SLC27A3Q5K4L6 730 aa24.78■■□□□ 1.56
HOMER3-208ENST00000595756 EMILIN1Q9Y6C2 1016 aa24.77■■□□□ 1.56
HOMER3-208ENST00000595756 TATP17735 454 aaPredicted RBP24.76■■□□□ 1.55
HOMER3-208ENST00000595756 PTGER2P43116 358 aa24.76■■□□□ 1.55
HOMER3-208ENST00000595756 EIF4G2P78344 907 aaKnown RBP eCLIP24.76■■□□□ 1.55
HOMER3-208ENST00000595756 MTFR1LQ9H019 292 aa24.76■■□□□ 1.55
HOMER3-208ENST00000595756 LRRC4BQ9NT99 713 aa24.76■■□□□ 1.55
HOMER3-208ENST00000595756 TOGARAM1Q9Y4F4 1720 aa24.75■■□□□ 1.55
HOMER3-208ENST00000595756 ZNF827Q17R98 1081 aa24.75■■□□□ 1.55
HOMER3-208ENST00000595756 SYTL4Q96C24 671 aaPredicted RBP24.75■■□□□ 1.55
HOMER3-208ENST00000595756 PCDH11XQ9BZA7 1347 aa24.75■■□□□ 1.55
HOMER3-208ENST00000595756 PCDH11YQ9BZA8 1340 aa24.75■■□□□ 1.55
HOMER3-208ENST00000595756 COL24A1Q17RW2 1714 aa24.75■■□□□ 1.55
HOMER3-208ENST00000595756 PRIM1P49642 420 aaKnown RBP24.74■■□□□ 1.55
HOMER3-208ENST00000595756 HSPA5P11021 654 aaKnown RBP24.72■■□□□ 1.55
HOMER3-208ENST00000595756 WASHC2AQ641Q2 1341 aa24.71■■□□□ 1.55
HOMER3-208ENST00000595756 ITGB4P16144 1822 aa24.71■■□□□ 1.55
HOMER3-208ENST00000595756 AKT1S1Q96B36 256 aa24.71■■□□□ 1.55
HOMER3-208ENST00000595756 C5P01031 1676 aa24.71■■□□□ 1.55
HOMER3-208ENST00000595756 SGIP1Q9BQI5 828 aa24.7■■□□□ 1.54
HOMER3-208ENST00000595756 ATF5Q9Y2D1 282 aaPredicted RBP24.7■■□□□ 1.54
HOMER3-208ENST00000595756 UTRNP46939 3433 aa24.69■■□□□ 1.54
HOMER3-208ENST00000595756 POLR3GLQ9BT43 218 aa24.69■■□□□ 1.54
HOMER3-208ENST00000595756 PPM1GO15355 546 aaPredicted RBP24.67■■□□□ 1.54
HOMER3-208ENST00000595756 TAF1LQ8IZX4 1826 aa24.67■■□□□ 1.54
HOMER3-208ENST00000595756 PLEKHG2Q9H7P9 1386 aa24.67■■□□□ 1.54
HOMER3-208ENST00000595756 POLKQ9UBT6 870 aa24.66■■□□□ 1.54
HOMER3-208ENST00000595756 MAP3K5Q99683 1374 aa24.65■■□□□ 1.54
HOMER3-208ENST00000595756 PNPLA7Q6ZV29 1317 aa24.64■■□□□ 1.54
HOMER3-208ENST00000595756 DCAF8L1A6NGE4 600 aa24.64■■□□□ 1.54
HOMER3-208ENST00000595756 CYP27B1O15528 508 aa24.64■■□□□ 1.54
HOMER3-208ENST00000595756 CCNL1Q9UK58 526 aaPredicted RBP24.64■■□□□ 1.54
HOMER3-208ENST00000595756 SLC16A10Q8TF71 515 aa24.63■■□□□ 1.53
HOMER3-208ENST00000595756 KCNQ4P56696 695 aa24.61■■□□□ 1.53
HOMER3-208ENST00000595756 EYA1Q99502 592 aa24.61■■□□□ 1.53
HOMER3-208ENST00000595756 FHDC1Q9C0D6 1143 aaPredicted RBP24.61■■□□□ 1.53
HOMER3-208ENST00000595756 PANK3Q9H999 370 aa24.61■■□□□ 1.53
HOMER3-208ENST00000595756 TFCP2L1Q9NZI6 479 aa24.61■■□□□ 1.53
HOMER3-208ENST00000595756 PALLDQ8WX93 1383 aa24.6■■□□□ 1.53
HOMER3-208ENST00000595756 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.6■■□□□ 1.53
HOMER3-208ENST00000595756 SPG7Q9UQ90 795 aa24.6■■□□□ 1.53
HOMER3-208ENST00000595756 NKX1-1Q15270 411 aaPredicted RBP24.59■■□□□ 1.53
HOMER3-208ENST00000595756 ARXQ96QS3 562 aa24.59■■□□□ 1.53
HOMER3-208ENST00000595756 SYT17Q9BSW7 474 aa24.59■■□□□ 1.53
HOMER3-208ENST00000595756 HMGB2P26583 209 aaKnown RBP24.58■■□□□ 1.53
HOMER3-208ENST00000595756 EIF4A2Q14240 407 aaKnown RBP24.58■■□□□ 1.53
HOMER3-208ENST00000595756 C4BP0C0L5 1744 aa24.58■■□□□ 1.52
HOMER3-208ENST00000595756 TNNT2P45379 298 aaPredicted RBP24.57■■□□□ 1.52
HOMER3-208ENST00000595756 YY1P25490 414 aa24.56■■□□□ 1.52
HOMER3-208ENST00000595756 MPRIPQ6WCQ1 1025 aa24.56■■□□□ 1.52
HOMER3-208ENST00000595756 IGSF1Q8N6C5 1336 aa24.56■■□□□ 1.52
HOMER3-208ENST00000595756 GOLGB1Q14789 3259 aaKnown RBP24.55■■□□□ 1.52
HOMER3-208ENST00000595756 POLD1P28340 1107 aa24.54■■□□□ 1.52
HOMER3-208ENST00000595756 SMARCC1Q92922 1105 aaPredicted RBP24.54■■□□□ 1.52
HOMER3-208ENST00000595756 UBR3Q6ZT12 1888 aa24.53■■□□□ 1.52
HOMER3-208ENST00000595756 CHD4Q14839 1912 aa24.51■■□□□ 1.51
HOMER3-208ENST00000595756 PHKG2P15735 406 aa24.51■■□□□ 1.51
HOMER3-208ENST00000595756 IFNL2Q8IZJ0 200 aa24.51■■□□□ 1.51
HOMER3-208ENST00000595756 PIGBQ92521 554 aa24.5■■□□□ 1.51
HOMER3-208ENST00000595756 MORC1Q86VD1 984 aa24.49■■□□□ 1.51
HOMER3-208ENST00000595756 KNSTRNQ9Y448 316 aa24.49■■□□□ 1.51
HOMER3-208ENST00000595756 ZNF831Q5JPB2 1677 aa24.49■■□□□ 1.51
HOMER3-208ENST00000595756 KIF7Q2M1P5 1343 aa24.48■■□□□ 1.51
HOMER3-208ENST00000595756 COL23A1Q86Y22 540 aaPredicted RBP24.48■■□□□ 1.51
HOMER3-208ENST00000595756 TMOD3Q9NYL9 352 aa24.48■■□□□ 1.51
HOMER3-208ENST00000595756 FLAD1Q8NFF5 587 aa24.47■■□□□ 1.51
HOMER3-208ENST00000595756 ZEB1P37275 1124 aaPredicted RBP24.45■■□□□ 1.5
HOMER3-208ENST00000595756 MSH5O43196 834 aa24.44■■□□□ 1.5
HOMER3-208ENST00000595756 AMER1Q5JTC6 1135 aaPredicted RBP24.44■■□□□ 1.5
HOMER3-208ENST00000595756 KDRP35968 1356 aa24.43■■□□□ 1.5
HOMER3-208ENST00000595756 LOC102724428A0A0B4J2F2 783 aa24.43■■□□□ 1.5
HOMER3-208ENST00000595756 SIK1P57059 783 aa24.43■■□□□ 1.5
HOMER3-208ENST00000595756 AK7Q96M32 723 aa24.43■■□□□ 1.5
HOMER3-208ENST00000595756 COL5A3P25940 1745 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-208ENST00000595756 HSP90AB1P08238 724 aaKnown RBP24.42■■□□□ 1.5
HOMER3-208ENST00000595756 KDM6AO15550 1401 aaPredicted RBP24.42■■□□□ 1.5
HOMER3-208ENST00000595756 PLEKHO1Q53GL0 409 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-208ENST00000595756 KLHL34Q8N239 644 aa24.41■■□□□ 1.5
HOMER3-208ENST00000595756 AMOTQ4VCS5 1084 aa24.4■■□□□ 1.5
HOMER3-208ENST00000595756 DCAF5Q96JK2 942 aa24.4■■□□□ 1.5
HOMER3-208ENST00000595756 ERVV-2B6SEH9 535 aa24.39■■□□□ 1.49
HOMER3-208ENST00000595756 LINC00116Q8NCU8 138 aa24.39■■□□□ 1.49
HOMER3-208ENST00000595756 ASAP1Q9ULH1 1129 aa24.39■■□□□ 1.49
HOMER3-208ENST00000595756 SCN11AQ9UI33 1791 aa24.39■■□□□ 1.49
HOMER3-208ENST00000595756 SSFA2P28290 1259 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms