RNA–Protein interactions for RNA: ENST00000595596.1

GRAMD1A-205, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 881 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-205ENST00000595596 RGPD2P0DJD1 1756 aa26.52■■□□□ 1.84
GRAMD1A-205ENST00000595596 PRIM1P49642 420 aaKnown RBP26.52■■□□□ 1.84
GRAMD1A-205ENST00000595596 ZCRB1Q8TBF4 217 aaKnown RBP26.52■■□□□ 1.84
GRAMD1A-205ENST00000595596 ANKRD36BQ8N2N9 1353 aa26.51■■□□□ 1.83
GRAMD1A-205ENST00000595596 TFCP2L1Q9NZI6 479 aa26.51■■□□□ 1.83
GRAMD1A-205ENST00000595596 DOT1LQ8TEK3 1739 aa26.5■■□□□ 1.83
GRAMD1A-205ENST00000595596 LY75O60449 1722 aa26.49■■□□□ 1.83
GRAMD1A-205ENST00000595596 COL24A1Q17RW2 1714 aa26.49■■□□□ 1.83
GRAMD1A-205ENST00000595596 GPR162Q16538 588 aa26.49■■□□□ 1.83
GRAMD1A-205ENST00000595596 PNPLA7Q6ZV29 1317 aa26.48■■□□□ 1.83
GRAMD1A-205ENST00000595596 RTL1A6NKG5 1358 aa26.47■■□□□ 1.83
GRAMD1A-205ENST00000595596 TUBGCP6Q96RT7 1819 aa26.47■■□□□ 1.83
GRAMD1A-205ENST00000595596 CGNL1Q0VF96 1302 aa26.46■■□□□ 1.83
GRAMD1A-205ENST00000595596 SHANK3Q9BYB0 1731 aa26.46■■□□□ 1.83
GRAMD1A-205ENST00000595596 FBLN1P23142 703 aa26.46■■□□□ 1.83
GRAMD1A-205ENST00000595596 KLHL34Q8N239 644 aa26.45■■□□□ 1.82
GRAMD1A-205ENST00000595596 HMGB2P26583 209 aaKnown RBP26.44■■□□□ 1.82
GRAMD1A-205ENST00000595596 SMG6Q86US8 1419 aaKnown RBP26.43■■□□□ 1.82
GRAMD1A-205ENST00000595596 KCNQ4P56696 695 aa26.43■■□□□ 1.82
GRAMD1A-205ENST00000595596 RAPGEF4Q8WZA2 1011 aa26.43■■□□□ 1.82
GRAMD1A-205ENST00000595596 CCNL1Q9UK58 526 aaPredicted RBP26.43■■□□□ 1.82
GRAMD1A-205ENST00000595596 MEGF6O75095 1541 aa26.42■■□□□ 1.82
GRAMD1A-205ENST00000595596 NSD2O96028 1365 aa26.42■■□□□ 1.82
GRAMD1A-205ENST00000595596 USP47Q96K76 1375 aa26.42■■□□□ 1.82
GRAMD1A-205ENST00000595596 FYB1O15117 783 aa26.41■■□□□ 1.82
GRAMD1A-205ENST00000595596 TMF1P82094 1093 aa26.41■■□□□ 1.82
GRAMD1A-205ENST00000595596 RRS1Q15050 365 aaKnown RBP26.41■■□□□ 1.82
GRAMD1A-205ENST00000595596 NBPF6Q5VWK0 638 aa26.41■■□□□ 1.82
GRAMD1A-205ENST00000595596 NBPF4Q96M43 638 aa26.41■■□□□ 1.82
GRAMD1A-205ENST00000595596 TATP17735 454 aaPredicted RBP26.39■■□□□ 1.82
GRAMD1A-205ENST00000595596 GGNBP2Q9H3C7 697 aa26.39■■□□□ 1.82
GRAMD1A-205ENST00000595596 PELP1Q8IZL8 1130 aaKnown RBP26.38■■□□□ 1.81
GRAMD1A-205ENST00000595596 UTRNP46939 3433 aa26.38■■□□□ 1.81
GRAMD1A-205ENST00000595596 MSH5O43196 834 aa26.37■■□□□ 1.81
GRAMD1A-205ENST00000595596 CDCA8Q53HL2 280 aa26.36■■□□□ 1.81
GRAMD1A-205ENST00000595596 USHBP1Q8N6Y0 703 aa26.36■■□□□ 1.81
GRAMD1A-205ENST00000595596 KIF20BQ96Q89 1820 aa26.35■■□□□ 1.81
GRAMD1A-205ENST00000595596 C1QTNF8P60827 252 aa26.35■■□□□ 1.81
GRAMD1A-205ENST00000595596 INSRP06213 1382 aa26.34■■□□□ 1.81
GRAMD1A-205ENST00000595596 PCDH11XQ9BZA7 1347 aa26.34■■□□□ 1.81
GRAMD1A-205ENST00000595596 PCDH11YQ9BZA8 1340 aa26.34■■□□□ 1.81
GRAMD1A-205ENST00000595596 KIF24Q5T7B8 1368 aa26.33■■□□□ 1.81
GRAMD1A-205ENST00000595596 COL23A1Q86Y22 540 aaPredicted RBP26.33■■□□□ 1.81
GRAMD1A-205ENST00000595596 FLAD1Q8NFF5 587 aa26.32■■□□□ 1.8
GRAMD1A-205ENST00000595596 NLGN2Q8NFZ4 835 aa26.32■■□□□ 1.8
GRAMD1A-205ENST00000595596 FLT4P35916 1363 aa26.32■■□□□ 1.8
GRAMD1A-205ENST00000595596 C5P01031 1676 aa26.31■■□□□ 1.8
GRAMD1A-205ENST00000595596 GRIN3BO60391 1043 aa26.31■■□□□ 1.8
GRAMD1A-205ENST00000595596 HSP90AB2PQ58FF8 381 aa26.31■■□□□ 1.8
GRAMD1A-205ENST00000595596 TAF1LQ8IZX4 1826 aa26.3■■□□□ 1.8
GRAMD1A-205ENST00000595596 SENP3-EIF4A1A0A087X0R7 540 aa26.3■■□□□ 1.8
GRAMD1A-205ENST00000595596 ITGB4P16144 1822 aa26.28■■□□□ 1.8
GRAMD1A-205ENST00000595596 MPRIPQ6WCQ1 1025 aa26.27■■□□□ 1.8
GRAMD1A-205ENST00000595596 SMARCC1Q92922 1105 aaPredicted RBP26.27■■□□□ 1.8
GRAMD1A-205ENST00000595596 PALLDQ8WX93 1383 aa26.26■■□□□ 1.79
GRAMD1A-205ENST00000595596 GIGYF1O75420 1035 aaPredicted RBP26.26■■□□□ 1.79
GRAMD1A-205ENST00000595596 MSL1Q68DK7 614 aa26.24■■□□□ 1.79
GRAMD1A-205ENST00000595596 CYP27B1O15528 508 aa26.23■■□□□ 1.79
GRAMD1A-205ENST00000595596 EIF4G2P78344 907 aaKnown RBP eCLIP26.23■■□□□ 1.79
GRAMD1A-205ENST00000595596 CD2APQ9Y5K6 639 aa26.23■■□□□ 1.79
GRAMD1A-205ENST00000595596 HSPA5P11021 654 aaKnown RBP26.22■■□□□ 1.79
GRAMD1A-205ENST00000595596 YBX3P16989 372 aaKnown RBP eCLIP26.22■■□□□ 1.79
GRAMD1A-205ENST00000595596 PKD1L3Q7Z443 1732 aa26.21■■□□□ 1.79
GRAMD1A-205ENST00000595596 AK7Q96M32 723 aa26.2■■□□□ 1.78
GRAMD1A-205ENST00000595596 SPG7Q9UQ90 795 aa26.2■■□□□ 1.78
GRAMD1A-205ENST00000595596 EMILIN1Q9Y6C2 1016 aa26.2■■□□□ 1.78
GRAMD1A-205ENST00000595596 MAP2P11137 1827 aaKnown RBP26.2■■□□□ 1.78
GRAMD1A-205ENST00000595596 C4BP0C0L5 1744 aa26.19■■□□□ 1.78
GRAMD1A-205ENST00000595596 CARD14Q9BXL6 1004 aa26.19■■□□□ 1.78
GRAMD1A-205ENST00000595596 NSD3Q9BZ95 1437 aa26.19■■□□□ 1.78
GRAMD1A-205ENST00000595596 NKX1-1Q15270 411 aaPredicted RBP26.18■■□□□ 1.78
GRAMD1A-205ENST00000595596 TOGARAM1Q9Y4F4 1720 aa26.18■■□□□ 1.78
GRAMD1A-205ENST00000595596 PPM1GO15355 546 aaPredicted RBP26.17■■□□□ 1.78
GRAMD1A-205ENST00000595596 UBR3Q6ZT12 1888 aa26.17■■□□□ 1.78
GRAMD1A-205ENST00000595596 PIGBQ92521 554 aa26.16■■□□□ 1.78
GRAMD1A-205ENST00000595596 NCAPD2Q15021 1401 aa26.15■■□□□ 1.78
GRAMD1A-205ENST00000595596 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.15■■□□□ 1.782e-6■□□□□ 9.5
GRAMD1A-205ENST00000595596 WASHC2AQ641Q2 1341 aa26.14■■□□□ 1.78
GRAMD1A-205ENST00000595596 ANKRD26Q9UPS8 1709 aa26.14■■□□□ 1.78
GRAMD1A-205ENST00000595596 GOLGB1Q14789 3259 aaKnown RBP26.14■■□□□ 1.77
GRAMD1A-205ENST00000595596 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.11■■□□□ 1.77
GRAMD1A-205ENST00000595596 LOC102724428A0A0B4J2F2 783 aa26.11■■□□□ 1.77
GRAMD1A-205ENST00000595596 SSFA2P28290 1259 aa26.11■■□□□ 1.77
GRAMD1A-205ENST00000595596 SIK1P57059 783 aa26.11■■□□□ 1.77
GRAMD1A-205ENST00000595596 EYA1Q99502 592 aa26.11■■□□□ 1.77
GRAMD1A-205ENST00000595596 TMOD3Q9NYL9 352 aa26.11■■□□□ 1.77
GRAMD1A-205ENST00000595596 PHF14O94880 888 aa26.1■■□□□ 1.77
GRAMD1A-205ENST00000595596 ZEB1P37275 1124 aaPredicted RBP26.09■■□□□ 1.77
GRAMD1A-205ENST00000595596 IFNL2Q8IZJ0 200 aa26.09■■□□□ 1.77
GRAMD1A-205ENST00000595596 ATP10DQ9P241 1426 aa26.07■■□□□ 1.76
GRAMD1A-205ENST00000595596 AMIGO3Q86WK7 504 aa26.06■■□□□ 1.76
GRAMD1A-205ENST00000595596 LINC00116Q8NCU8 138 aa26.06■■□□□ 1.76
GRAMD1A-205ENST00000595596 GPBP1L1Q9HC44 474 aaPredicted RBP26.06■■□□□ 1.76
GRAMD1A-205ENST00000595596 POLKQ9UBT6 870 aa26.06■■□□□ 1.76
GRAMD1A-205ENST00000595596 PHKG2P15735 406 aa26.05■■□□□ 1.76
GRAMD1A-205ENST00000595596 ATP6V1AP38606 617 aa26.05■■□□□ 1.76
GRAMD1A-205ENST00000595596 IGSF1Q8N6C5 1336 aa26.05■■□□□ 1.76
GRAMD1A-205ENST00000595596 ASAP1Q9ULH1 1129 aa26.04■■□□□ 1.76
GRAMD1A-205ENST00000595596 PLEKHG2Q9H7P9 1386 aa26.03■■□□□ 1.76
GRAMD1A-205ENST00000595596 GNPATO15228 680 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms