RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ACSBG1Q96GR2 724 aa30.63■■■□□ 2.49
GTF2F1-204ENST00000594965 KNSTRNQ9Y448 316 aa30.63■■■□□ 2.49
GTF2F1-204ENST00000594965 NCAPD2Q15021 1401 aa30.63■■■□□ 2.49
GTF2F1-204ENST00000594965 DDX54Q8TDD1 881 aaKnown RBP30.62■■■□□ 2.49
GTF2F1-204ENST00000594965 DOT1LQ8TEK3 1739 aa30.61■■■□□ 2.49
GTF2F1-204ENST00000594965 AMER1Q5JTC6 1135 aaPredicted RBP30.61■■■□□ 2.49
GTF2F1-204ENST00000594965 ZCRB1Q8TBF4 217 aaKnown RBP30.61■■■□□ 2.49
GTF2F1-204ENST00000594965 PER1O15534 1290 aaPredicted RBP30.6■■■□□ 2.49
GTF2F1-204ENST00000594965 R3HDM1Q15032 1099 aaKnown RBP30.59■■■□□ 2.49
GTF2F1-204ENST00000594965 PKD1L3Q7Z443 1732 aa30.59■■■□□ 2.49
GTF2F1-204ENST00000594965 MORC1Q86VD1 984 aa30.58■■■□□ 2.49
GTF2F1-204ENST00000594965 PROM2Q8N271 834 aa30.58■■■□□ 2.49
GTF2F1-204ENST00000594965 RAPGEF4Q8WZA2 1011 aa30.57■■■□□ 2.48
GTF2F1-204ENST00000594965 TATP17735 454 aaPredicted RBP30.56■■■□□ 2.48
GTF2F1-204ENST00000594965 EYA1Q99502 592 aa30.56■■■□□ 2.48
GTF2F1-204ENST00000594965 EIF4A2Q14240 407 aaKnown RBP30.55■■■□□ 2.48
GTF2F1-204ENST00000594965 LRP5O75197 1615 aa30.53■■■□□ 2.48
GTF2F1-204ENST00000594965 TXNRD1Q16881 649 aa30.5■■■□□ 2.47
GTF2F1-204ENST00000594965 NBPF14Q5TI25 921 aa30.5■■■□□ 2.47
GTF2F1-204ENST00000594965 TOGARAM1Q9Y4F4 1720 aa30.47■■■□□ 2.47
GTF2F1-204ENST00000594965 PRIM1P49642 420 aaKnown RBP30.46■■■□□ 2.47
GTF2F1-204ENST00000594965 ANO8Q9HCE9 1232 aaPredicted RBP30.46■■■□□ 2.47
GTF2F1-204ENST00000594965 PCDH11XQ9BZA7 1347 aa30.46■■■□□ 2.47
GTF2F1-204ENST00000594965 PCDH11YQ9BZA8 1340 aa30.46■■■□□ 2.47
GTF2F1-204ENST00000594965 ITGB4P16144 1822 aa30.45■■■□□ 2.47
GTF2F1-204ENST00000594965 LY75O60449 1722 aa30.45■■■□□ 2.47
GTF2F1-204ENST00000594965 CYP27B1O15528 508 aa30.45■■■□□ 2.47
GTF2F1-204ENST00000594965 IGSF1Q8N6C5 1336 aa30.45■■■□□ 2.46
GTF2F1-204ENST00000594965 PAPPAQ13219 1627 aa30.44■■■□□ 2.46
GTF2F1-204ENST00000594965 CC2D1BQ5T0F9 858 aaKnown RBP30.44■■■□□ 2.46
GTF2F1-204ENST00000594965 NPC1L1Q9UHC9 1359 aa30.42■■■□□ 2.46
GTF2F1-204ENST00000594965 CASZ1Q86V15 1759 aa30.42■■■□□ 2.46
GTF2F1-204ENST00000594965 SYTL4Q96C24 671 aaPredicted RBP30.42■■■□□ 2.46
GTF2F1-204ENST00000594965 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.38■■■□□ 2.455e-7■■■■■ 31.6
GTF2F1-204ENST00000594965 SPG7Q9UQ90 795 aa30.38■■■□□ 2.45
GTF2F1-204ENST00000594965 SRCAPQ6ZRS2 3230 aa30.37■■■□□ 2.45
GTF2F1-204ENST00000594965 MTHFSP49914 203 aa30.37■■■□□ 2.45
GTF2F1-204ENST00000594965 LRRC4BQ9NT99 713 aa30.37■■■□□ 2.45
GTF2F1-204ENST00000594965 IL13P35225 146 aa30.36■■■□□ 2.45
GTF2F1-204ENST00000594965 NKX1-1Q15270 411 aaPredicted RBP30.36■■■□□ 2.45
GTF2F1-204ENST00000594965 PLEKHG2Q9H7P9 1386 aa30.35■■■□□ 2.45
GTF2F1-204ENST00000594965 SLC15A2Q16348 729 aa30.33■■■□□ 2.45
GTF2F1-204ENST00000594965 AEBP1Q8IUX7 1158 aa30.33■■■□□ 2.45
GTF2F1-204ENST00000594965 STK32BQ9NY57 414 aa30.32■■■□□ 2.44
GTF2F1-204ENST00000594965 CNGB1Q14028 1251 aaPredicted RBP30.31■■■□□ 2.44
GTF2F1-204ENST00000594965 PDGFDQ9GZP0 370 aaPredicted RBP30.31■■■□□ 2.44
GTF2F1-204ENST00000594965 KDRP35968 1356 aa30.3■■■□□ 2.44
GTF2F1-204ENST00000594965 PHKG2P15735 406 aa30.3■■■□□ 2.44
GTF2F1-204ENST00000594965 TUBGCP6Q96RT7 1819 aa30.29■■■□□ 2.44
GTF2F1-204ENST00000594965 SLC27A3Q5K4L6 730 aa30.29■■■□□ 2.44
GTF2F1-204ENST00000594965 IFNL2Q8IZJ0 200 aa30.29■■■□□ 2.44
GTF2F1-204ENST00000594965 QSER1Q2KHR3 1735 aa30.29■■■□□ 2.44
GTF2F1-204ENST00000594965 KCNQ4P56696 695 aa30.28■■■□□ 2.44
GTF2F1-204ENST00000594965 COL3A1P02461 1466 aaPredicted RBP30.27■■■□□ 2.44
GTF2F1-204ENST00000594965 ZNF827Q17R98 1081 aa30.27■■■□□ 2.44
GTF2F1-204ENST00000594965 SULT6B1Q6IMI4 303 aa30.27■■■□□ 2.44
GTF2F1-204ENST00000594965 MPRIPQ6WCQ1 1025 aa30.27■■■□□ 2.44
GTF2F1-204ENST00000594965 TAF1LQ8IZX4 1826 aa30.26■■■□□ 2.44
GTF2F1-204ENST00000594965 PLEKHO1Q53GL0 409 aaPredicted RBP30.24■■■□□ 2.43
GTF2F1-204ENST00000594965 AKT1S1Q96B36 256 aa30.24■■■□□ 2.43
GTF2F1-204ENST00000594965 C5P01031 1676 aa30.23■■■□□ 2.43
GTF2F1-204ENST00000594965 PIGBQ92521 554 aa30.23■■■□□ 2.43
GTF2F1-204ENST00000594965 CCNL1Q9UK58 526 aaPredicted RBP30.22■■■□□ 2.43
GTF2F1-204ENST00000594965 DIAPH1O60610 1272 aaKnown RBP30.21■■■□□ 2.43
GTF2F1-204ENST00000594965 AMOTQ4VCS5 1084 aa30.21■■■□□ 2.43
GTF2F1-204ENST00000594965 VIRMAQ69YN4 1812 aaKnown RBP30.2■■■□□ 2.43
GTF2F1-204ENST00000594965 PALLDQ8WX93 1383 aa30.2■■■□□ 2.43
GTF2F1-204ENST00000594965 SPON1Q9HCB6 807 aa30.2■■■□□ 2.43
GTF2F1-204ENST00000594965 ZNF530Q6P9A1 599 aaPredicted RBP30.19■■■□□ 2.42
GTF2F1-204ENST00000594965 KDM6AO15550 1401 aaPredicted RBP30.18■■■□□ 2.42
GTF2F1-204ENST00000594965 SCN11AQ9UI33 1791 aa30.18■■■□□ 2.42
GTF2F1-204ENST00000594965 ZBTB7AO95365 584 aa30.17■■■□□ 2.42
GTF2F1-204ENST00000594965 HMOX1P09601 288 aa30.17■■■□□ 2.42
GTF2F1-204ENST00000594965 TMOD3Q9NYL9 352 aa30.16■■■□□ 2.42
GTF2F1-204ENST00000594965 HSP90AB1P08238 724 aaKnown RBP30.15■■■□□ 2.42
GTF2F1-204ENST00000594965 SMARCC1Q92922 1105 aaPredicted RBP30.15■■■□□ 2.42
GTF2F1-204ENST00000594965 DCAF5Q96JK2 942 aa30.14■■■□□ 2.42
GTF2F1-204ENST00000594965 PPP2R1AP30153 589 aa30.13■■■□□ 2.41
GTF2F1-204ENST00000594965 ERVV-2B6SEH9 535 aa30.12■■■□□ 2.41
GTF2F1-204ENST00000594965 ASAP1Q9ULH1 1129 aa30.12■■■□□ 2.41
GTF2F1-204ENST00000594965 ATF5Q9Y2D1 282 aaPredicted RBP30.12■■■□□ 2.41
GTF2F1-204ENST00000594965 COL24A1Q17RW2 1714 aa30.12■■■□□ 2.41
GTF2F1-204ENST00000594965 PNPLA7Q6ZV29 1317 aa30.12■■■□□ 2.41
GTF2F1-204ENST00000594965 C4BP0C0L5 1744 aa30.11■■■□□ 2.41
GTF2F1-204ENST00000594965 PTGER2P43116 358 aa30.11■■■□□ 2.41
GTF2F1-204ENST00000594965 C1orf141Q5JVX7 400 aa30.1■■■□□ 2.41
GTF2F1-204ENST00000594965 MTFR1LQ9H019 292 aa30.1■■■□□ 2.41
GTF2F1-204ENST00000594965 ATG3Q9NT62 314 aa30.1■■■□□ 2.41
GTF2F1-204ENST00000594965 TFCP2L1Q9NZI6 479 aa30.08■■■□□ 2.41
GTF2F1-204ENST00000594965 SGIP1Q9BQI5 828 aa30.07■■■□□ 2.4
GTF2F1-204ENST00000594965 UBR3Q6ZT12 1888 aa30.07■■■□□ 2.4
GTF2F1-204ENST00000594965 ADAMTS7Q9UKP4 1686 aa30.07■■■□□ 2.4
GTF2F1-204ENST00000594965 LOC102724428A0A0B4J2F2 783 aa30.06■■■□□ 2.4
GTF2F1-204ENST00000594965 U2SURPO15042 1029 aaKnown RBP30.06■■■□□ 2.4
GTF2F1-204ENST00000594965 SIK1P57059 783 aa30.06■■■□□ 2.4
GTF2F1-204ENST00000594965 ZNF831Q5JPB2 1677 aa30.06■■■□□ 2.4
GTF2F1-204ENST00000594965 MTHFSDQ2M296 383 aaKnown RBP30.05■■■□□ 2.4
GTF2F1-204ENST00000594965 AKAP4Q5JQC9 854 aa30.05■■■□□ 2.4
GTF2F1-204ENST00000594965 CABP4P57796 275 aa30.04■■■□□ 2.4
GTF2F1-204ENST00000594965 CFAP53Q96M91 514 aa30.04■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms