RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 RGPD2P0DJD1 1756 aa21.7■■□□□ 1.06
FOXA3-202ENST00000594297 IFFO2Q5TF58 517 aa21.69■■□□□ 1.06
FOXA3-202ENST00000594297 DDX54Q8TDD1 881 aaKnown RBP21.69■■□□□ 1.06
FOXA3-202ENST00000594297 TFCP2L1Q9NZI6 479 aa21.69■■□□□ 1.06
FOXA3-202ENST00000594297 CEP350Q5VT06 3117 aa21.69■■□□□ 1.06
FOXA3-202ENST00000594297 ANKRD36BQ8N2N9 1353 aa21.69■■□□□ 1.06
FOXA3-202ENST00000594297 A0A1W2PP64 1363 aa21.67■■□□□ 1.06
FOXA3-202ENST00000594297 YBX3P16989 372 aaKnown RBP eCLIP21.67■■□□□ 1.06
FOXA3-202ENST00000594297 SYTL4Q96C24 671 aaPredicted RBP21.67■■□□□ 1.06
FOXA3-202ENST00000594297 C5P01031 1676 aa21.66■■□□□ 1.06
FOXA3-202ENST00000594297 MEGF6O75095 1541 aa21.65■■□□□ 1.06
FOXA3-202ENST00000594297 TMC1Q8TDI8 760 aa21.64■■□□□ 1.05
FOXA3-202ENST00000594297 LTV1Q96GA3 475 aaPredicted RBP21.64■■□□□ 1.05
FOXA3-202ENST00000594297 ATP10DQ9P241 1426 aa21.63■■□□□ 1.05
FOXA3-202ENST00000594297 PRIM1P49642 420 aaKnown RBP21.63■■□□□ 1.05
FOXA3-202ENST00000594297 HDGFL2Q7Z4V5 671 aaPredicted RBP21.63■■□□□ 1.05
FOXA3-202ENST00000594297 IP6K1Q92551 441 aa21.63■■□□□ 1.05
FOXA3-202ENST00000594297 SLC12A5Q9H2X9 1139 aa21.62■■□□□ 1.05
FOXA3-202ENST00000594297 CCNL1Q9UK58 526 aaPredicted RBP21.61■■□□□ 1.05
FOXA3-202ENST00000594297 GRIN3BO60391 1043 aa21.6■■□□□ 1.05
FOXA3-202ENST00000594297 MSL1Q68DK7 614 aa21.6■■□□□ 1.05
FOXA3-202ENST00000594297 TAF1LQ8IZX4 1826 aa21.59■■□□□ 1.05
FOXA3-202ENST00000594297 COL23A1Q86Y22 540 aaPredicted RBP21.59■■□□□ 1.05
FOXA3-202ENST00000594297 MSH5O43196 834 aa21.58■■□□□ 1.05
FOXA3-202ENST00000594297 TOGARAM1Q9Y4F4 1720 aa21.58■■□□□ 1.04
FOXA3-202ENST00000594297 TERF2IPQ9NYB0 399 aa21.57■■□□□ 1.04
FOXA3-202ENST00000594297 ADCY9O60503 1353 aa21.57■■□□□ 1.04
FOXA3-202ENST00000594297 USP47Q96K76 1375 aa21.57■■□□□ 1.04
FOXA3-202ENST00000594297 MAP3K19Q56UN5 1328 aa21.56■■□□□ 1.04
FOXA3-202ENST00000594297 ZCRB1Q8TBF4 217 aaKnown RBP21.56■■□□□ 1.04
FOXA3-202ENST00000594297 HOXC9P31274 260 aa21.55■■□□□ 1.04
FOXA3-202ENST00000594297 CARD11Q9BXL7 1154 aa21.54■■□□□ 1.04
FOXA3-202ENST00000594297 C4BP0C0L5 1744 aa21.53■■□□□ 1.04
FOXA3-202ENST00000594297 RTL1A6NKG5 1358 aa21.52■■□□□ 1.04
FOXA3-202ENST00000594297 FBLN1P23142 703 aa21.52■■□□□ 1.04
FOXA3-202ENST00000594297 GPBP1L1Q9HC44 474 aaPredicted RBP21.51■■□□□ 1.03
FOXA3-202ENST00000594297 UBR3Q6ZT12 1888 aa21.5■■□□□ 1.03
FOXA3-202ENST00000594297 AMPHP49418 695 aa21.5■■□□□ 1.03
FOXA3-202ENST00000594297 COG3Q96JB2 828 aa21.5■■□□□ 1.03
FOXA3-202ENST00000594297 USHBP1Q8N6Y0 703 aa21.49■■□□□ 1.03
FOXA3-202ENST00000594297 ZNF526Q8TF50 670 aaPredicted RBP21.49■■□□□ 1.03
FOXA3-202ENST00000594297 CD2APQ9Y5K6 639 aa21.49■■□□□ 1.03
FOXA3-202ENST00000594297 PALLDQ8WX93 1383 aa21.48■■□□□ 1.03
FOXA3-202ENST00000594297 ITGB4P16144 1822 aa21.48■■□□□ 1.03
FOXA3-202ENST00000594297 HSPA6P17066 643 aa21.47■■□□□ 1.03
FOXA3-202ENST00000594297 NBPF6Q5VWK0 638 aa21.47■■□□□ 1.03
FOXA3-202ENST00000594297 NBPF4Q96M43 638 aa21.47■■□□□ 1.03
FOXA3-202ENST00000594297 SMG6Q86US8 1419 aaKnown RBP21.46■■□□□ 1.03
FOXA3-202ENST00000594297 PKD1L3Q7Z443 1732 aa21.46■■□□□ 1.03
FOXA3-202ENST00000594297 CICQ96RK0 1608 aaPredicted RBP21.45■■□□□ 1.02
FOXA3-202ENST00000594297 PUS7Q96PZ0 661 aaKnown RBP21.45■■□□□ 1.02
FOXA3-202ENST00000594297 CGNL1Q0VF96 1302 aa21.45■■□□□ 1.02
FOXA3-202ENST00000594297 KIF20BQ96Q89 1820 aa21.45■■□□□ 1.02
FOXA3-202ENST00000594297 RRS1Q15050 365 aaKnown RBP21.44■■□□□ 1.02
FOXA3-202ENST00000594297 AMIGO3Q86WK7 504 aa21.44■■□□□ 1.02
FOXA3-202ENST00000594297 WWC3Q9ULE0 1092 aa21.44■■□□□ 1.02
FOXA3-202ENST00000594297 IGSF1Q8N6C5 1336 aa21.44■■□□□ 1.02
FOXA3-202ENST00000594297 FLAD1Q8NFF5 587 aa21.43■■□□□ 1.02
FOXA3-202ENST00000594297 RAPGEF4Q8WZA2 1011 aa21.43■■□□□ 1.02
FOXA3-202ENST00000594297 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
FOXA3-202ENST00000594297 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
FOXA3-202ENST00000594297 MAP2P11137 1827 aaKnown RBP21.42■■□□□ 1.02
FOXA3-202ENST00000594297 KIAA1551Q9HCM1 1747 aa21.41■■□□□ 1.02
FOXA3-202ENST00000594297 TATP17735 454 aaPredicted RBP21.4■■□□□ 1.02
FOXA3-202ENST00000594297 MPRIPQ6WCQ1 1025 aa21.4■■□□□ 1.02
FOXA3-202ENST00000594297 TESK2Q96S53 571 aa21.4■■□□□ 1.02
FOXA3-202ENST00000594297 PHF14O94880 888 aa21.39■■□□□ 1.01
FOXA3-202ENST00000594297 SMIM5Q71RC9 77 aa21.39■■□□□ 1.01
FOXA3-202ENST00000594297 AK7Q96M32 723 aa21.39■■□□□ 1.01
FOXA3-202ENST00000594297 NSD3Q9BZ95 1437 aa21.38■■□□□ 1.01
FOXA3-202ENST00000594297 INSRP06213 1382 aa21.37■■□□□ 1.01
FOXA3-202ENST00000594297 CYP27B1O15528 508 aa21.37■■□□□ 1.01
FOXA3-202ENST00000594297 GGNBP2Q9H3C7 697 aa21.37■■□□□ 1.01
FOXA3-202ENST00000594297 KIF13BQ9NQT8 1826 aa21.36■■□□□ 1.01
FOXA3-202ENST00000594297 KIF3CO14782 793 aa21.36■■□□□ 1.01
FOXA3-202ENST00000594297 FLT4P35916 1363 aa21.36■■□□□ 1.01
FOXA3-202ENST00000594297 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
FOXA3-202ENST00000594297 HSP90AB2PQ58FF8 381 aa21.35■■□□□ 1.01
FOXA3-202ENST00000594297 N4BP2Q86UW6 1770 aaPredicted RBP21.34■■□□□ 1.01
FOXA3-202ENST00000594297 HMGB2P26583 209 aaKnown RBP21.34■■□□□ 1.01
FOXA3-202ENST00000594297 SMARCC1Q92922 1105 aaPredicted RBP21.34■■□□□ 1.01
FOXA3-202ENST00000594297 ANKRD26Q9UPS8 1709 aa21.34■■□□□ 1.01
FOXA3-202ENST00000594297 PXDNLA1KZ92 1463 aa21.33■■□□□ 1.01
FOXA3-202ENST00000594297 NCAPD2Q15021 1401 aa21.33■■□□□ 1.01
FOXA3-202ENST00000594297 ST20-MTHFSA0A0A6YYL1 179 aa21.33■■□□□ 1.01
FOXA3-202ENST00000594297 FYB1O15117 783 aa21.33■■□□□ 1.01
FOXA3-202ENST00000594297 SSFA2P28290 1259 aa21.32■■□□□ 1
FOXA3-202ENST00000594297 LINC00116Q8NCU8 138 aa21.32■■□□□ 1
FOXA3-202ENST00000594297 PIGBQ92521 554 aa21.31■■□□□ 1
FOXA3-202ENST00000594297 KIF24Q5T7B8 1368 aa21.31■■□□□ 1
FOXA3-202ENST00000594297 EIF4G2P78344 907 aaKnown RBP eCLIP21.29■■□□□ 1
FOXA3-202ENST00000594297 WDR90Q96KV7 1748 aa21.29■■□□□ 1
FOXA3-202ENST00000594297 LOC102724428A0A0B4J2F2 783 aa21.28■■□□□ 1
FOXA3-202ENST00000594297 SIK1P57059 783 aa21.28■■□□□ 1
FOXA3-202ENST00000594297 BRCA1P38398 1863 aaKnown RBP21.28■■□□□ 1
FOXA3-202ENST00000594297 GNPATO15228 680 aa21.27■■□□□ 1
FOXA3-202ENST00000594297 ITPK1Q13572 414 aa21.27■■□□□ 1
FOXA3-202ENST00000594297 C10orf71Q711Q0 1435 aa21.27■■□□□ 1
FOXA3-202ENST00000594297 APLP1P51693 650 aa21.26■□□□□ 0.99
FOXA3-202ENST00000594297 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms