RNA–Protein interactions for RNA: ENST00000593899.5

SYMPK-203, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-203ENST00000593899 NCAPD2Q15021 1401 aa16.96■□□□□ 0.3
SYMPK-203ENST00000593899 DCAF8L1A6NGE4 600 aa16.95■□□□□ 0.3
SYMPK-203ENST00000593899 PTF1AQ7RTS3 328 aa16.95■□□□□ 0.3
SYMPK-203ENST00000593899 SMG6Q86US8 1419 aaKnown RBP16.95■□□□□ 0.3
SYMPK-203ENST00000593899 BCL11BQ9C0K0 894 aaPredicted RBP16.94■□□□□ 0.3
SYMPK-203ENST00000593899 MEGF6O75095 1541 aa16.94■□□□□ 0.3
SYMPK-203ENST00000593899 PLSCR1O15162 318 aa16.93■□□□□ 0.3
SYMPK-203ENST00000593899 SHANK3Q9BYB0 1731 aa16.93■□□□□ 0.3
SYMPK-203ENST00000593899 TNNT2P45379 298 aaPredicted RBP16.92■□□□□ 0.3
SYMPK-203ENST00000593899 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
SYMPK-203ENST00000593899 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
SYMPK-203ENST00000593899 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
SYMPK-203ENST00000593899 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
SYMPK-203ENST00000593899 EYA1Q99502 592 aa16.9■□□□□ 0.3
SYMPK-203ENST00000593899 NHSQ6T4R5 1651 aa16.89■□□□□ 0.29
SYMPK-203ENST00000593899 EIF4A2Q14240 407 aaKnown RBP16.89■□□□□ 0.29
SYMPK-203ENST00000593899 ZCRB1Q8TBF4 217 aaKnown RBP16.89■□□□□ 0.29
SYMPK-203ENST00000593899 ANO8Q9HCE9 1232 aaPredicted RBP16.89■□□□□ 0.29
SYMPK-203ENST00000593899 PROM2Q8N271 834 aa16.88■□□□□ 0.29
SYMPK-203ENST00000593899 ZNF784Q8NCA9 323 aaPredicted RBP16.88■□□□□ 0.29
SYMPK-203ENST00000593899 DDX54Q8TDD1 881 aaKnown RBP16.87■□□□□ 0.29
SYMPK-203ENST00000593899 RAPGEF4Q8WZA2 1011 aa16.87■□□□□ 0.29
SYMPK-203ENST00000593899 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
SYMPK-203ENST00000593899 PTGER2P43116 358 aa16.86■□□□□ 0.29
SYMPK-203ENST00000593899 ACSBG1Q96GR2 724 aa16.85■□□□□ 0.29
SYMPK-203ENST00000593899 IGSF1Q8N6C5 1336 aa16.85■□□□□ 0.29
SYMPK-203ENST00000593899 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
SYMPK-203ENST00000593899 BTAF1O14981 1849 aa16.83■□□□□ 0.28
SYMPK-203ENST00000593899 CYP27B1O15528 508 aa16.83■□□□□ 0.28
SYMPK-203ENST00000593899 CC2D1BQ5T0F9 858 aaKnown RBP16.83■□□□□ 0.28
SYMPK-203ENST00000593899 KAT6BQ8WYB5 2073 aa16.83■□□□□ 0.28
SYMPK-203ENST00000593899 PDGFDQ9GZP0 370 aaPredicted RBP16.83■□□□□ 0.28
SYMPK-203ENST00000593899 PLEKHG2Q9H7P9 1386 aa16.83■□□□□ 0.28
SYMPK-203ENST00000593899 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.83■□□□□ 0.28
SYMPK-203ENST00000593899 PCDH11XQ9BZA7 1347 aa16.81■□□□□ 0.28
SYMPK-203ENST00000593899 PCDH11YQ9BZA8 1340 aa16.81■□□□□ 0.28
SYMPK-203ENST00000593899 IL13P35225 146 aa16.81■□□□□ 0.28
SYMPK-203ENST00000593899 MTHFSP49914 203 aa16.81■□□□□ 0.28
SYMPK-203ENST00000593899 DOT1LQ8TEK3 1739 aa16.81■□□□□ 0.28
SYMPK-203ENST00000593899 CHD4Q14839 1912 aa16.8■□□□□ 0.28
SYMPK-203ENST00000593899 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
SYMPK-203ENST00000593899 NKX1-1Q15270 411 aaPredicted RBP16.8■□□□□ 0.28
SYMPK-203ENST00000593899 TXNRD1Q16881 649 aa16.8■□□□□ 0.28
SYMPK-203ENST00000593899 MAP3K5Q99683 1374 aa16.79■□□□□ 0.28
SYMPK-203ENST00000593899 ZBTB7AO95365 584 aa16.79■□□□□ 0.28
SYMPK-203ENST00000593899 SGIP1Q9BQI5 828 aa16.79■□□□□ 0.28
SYMPK-203ENST00000593899 SYT17Q9BSW7 474 aa16.79■□□□□ 0.28
SYMPK-203ENST00000593899 KDRP35968 1356 aa16.78■□□□□ 0.28
SYMPK-203ENST00000593899 SPG7Q9UQ90 795 aa16.78■□□□□ 0.28
SYMPK-203ENST00000593899 C1QTNF8P60827 252 aa16.77■□□□□ 0.28
SYMPK-203ENST00000593899 FHDC1Q9C0D6 1143 aaPredicted RBP16.77■□□□□ 0.28
SYMPK-203ENST00000593899 PAPPAQ13219 1627 aa16.77■□□□□ 0.27
SYMPK-203ENST00000593899 TOGARAM1Q9Y4F4 1720 aa16.76■□□□□ 0.27
SYMPK-203ENST00000593899 SENP3-EIF4A1A0A087X0R7 540 aa16.76■□□□□ 0.27
SYMPK-203ENST00000593899 SLC15A2Q16348 729 aa16.76■□□□□ 0.27
SYMPK-203ENST00000593899 AEBP1Q8IUX7 1158 aa16.76■□□□□ 0.27
SYMPK-203ENST00000593899 MTFR1LQ9H019 292 aa16.76■□□□□ 0.27
SYMPK-203ENST00000593899 COL3A1P02461 1466 aaPredicted RBP16.75■□□□□ 0.27
SYMPK-203ENST00000593899 LRRC4BQ9NT99 713 aa16.75■□□□□ 0.27
SYMPK-203ENST00000593899 LY75O60449 1722 aa16.74■□□□□ 0.27
SYMPK-203ENST00000593899 PHKG2P15735 406 aa16.74■□□□□ 0.27
SYMPK-203ENST00000593899 STK32BQ9NY57 414 aa16.74■□□□□ 0.27
SYMPK-203ENST00000593899 ATF5Q9Y2D1 282 aaPredicted RBP16.74■□□□□ 0.27
SYMPK-203ENST00000593899 ITGB4P16144 1822 aa16.74■□□□□ 0.27
SYMPK-203ENST00000593899 GOLGB1Q14789 3259 aaKnown RBP16.74■□□□□ 0.27
SYMPK-203ENST00000593899 SULT6B1Q6IMI4 303 aa16.73■□□□□ 0.27
SYMPK-203ENST00000593899 IFNL2Q8IZJ0 200 aa16.73■□□□□ 0.27
SYMPK-203ENST00000593899 SYTL4Q96C24 671 aaPredicted RBP16.73■□□□□ 0.27
SYMPK-203ENST00000593899 IFFO2Q5TF58 517 aa16.72■□□□□ 0.27
SYMPK-203ENST00000593899 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
SYMPK-203ENST00000593899 DIAPH1O60610 1272 aaKnown RBP16.71■□□□□ 0.27
SYMPK-203ENST00000593899 CNGB1Q14028 1251 aaPredicted RBP16.71■□□□□ 0.27
SYMPK-203ENST00000593899 AMOTQ4VCS5 1084 aa16.71■□□□□ 0.27
SYMPK-203ENST00000593899 PLEKHO1Q53GL0 409 aaPredicted RBP16.71■□□□□ 0.27
SYMPK-203ENST00000593899 SLC27A3Q5K4L6 730 aa16.71■□□□□ 0.27
SYMPK-203ENST00000593899 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
SYMPK-203ENST00000593899 MPRIPQ6WCQ1 1025 aa16.69■□□□□ 0.26
SYMPK-203ENST00000593899 PIGBQ92521 554 aa16.69■□□□□ 0.26
SYMPK-203ENST00000593899 COL24A1Q17RW2 1714 aa16.69■□□□□ 0.26
SYMPK-203ENST00000593899 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
SYMPK-203ENST00000593899 ARXQ96QS3 562 aa16.68■□□□□ 0.26
SYMPK-203ENST00000593899 ZNF827Q17R98 1081 aa16.67■□□□□ 0.26
SYMPK-203ENST00000593899 KDM6AO15550 1401 aaPredicted RBP16.67■□□□□ 0.26
SYMPK-203ENST00000593899 QSER1Q2KHR3 1735 aa16.67■□□□□ 0.26
SYMPK-203ENST00000593899 ERVV-2B6SEH9 535 aa16.66■□□□□ 0.26
SYMPK-203ENST00000593899 HSP90AB1P08238 724 aaKnown RBP16.66■□□□□ 0.26
SYMPK-203ENST00000593899 HMOX1P09601 288 aa16.66■□□□□ 0.26
SYMPK-203ENST00000593899 ZEB1P37275 1124 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-203ENST00000593899 KCNQ4P56696 695 aa16.66■□□□□ 0.26
SYMPK-203ENST00000593899 ZNF530Q6P9A1 599 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-203ENST00000593899 DCAF5Q96JK2 942 aa16.66■□□□□ 0.26
SYMPK-203ENST00000593899 PALLDQ8WX93 1383 aa16.65■□□□□ 0.26
SYMPK-203ENST00000593899 SMARCC1Q92922 1105 aaPredicted RBP16.64■□□□□ 0.25
SYMPK-203ENST00000593899 CCNL1Q9UK58 526 aaPredicted RBP16.64■□□□□ 0.25
SYMPK-203ENST00000593899 TMOD3Q9NYL9 352 aa16.63■□□□□ 0.25
SYMPK-203ENST00000593899 TAF1LQ8IZX4 1826 aa16.63■□□□□ 0.25
SYMPK-203ENST00000593899 SCN11AQ9UI33 1791 aa16.62■□□□□ 0.25
SYMPK-203ENST00000593899 GIGYF1O75420 1035 aaPredicted RBP16.62■□□□□ 0.25
SYMPK-203ENST00000593899 DDX10Q13206 875 aaKnown RBP16.62■□□□□ 0.25
SYMPK-203ENST00000593899 MTHFSDQ2M296 383 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms