RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MEGF6O75095 1541 aa26.19■■□□□ 1.78
CCDC43-205ENST00000592333 MYOM1P52179 1685 aa26.19■■□□□ 1.78
CCDC43-205ENST00000592333 HMGB2P26583 209 aaKnown RBP26.18■■□□□ 1.78
CCDC43-205ENST00000592333 KAT6BQ8WYB5 2073 aa26.18■■□□□ 1.78
CCDC43-205ENST00000592333 RGPD2P0DJD1 1756 aa26.17■■□□□ 1.78
CCDC43-205ENST00000592333 PRIM1P49642 420 aaKnown RBP26.16■■□□□ 1.78
CCDC43-205ENST00000592333 HSP90AB2PQ58FF8 381 aa26.16■■□□□ 1.78
CCDC43-205ENST00000592333 LRRC4BQ9NT99 713 aa26.16■■□□□ 1.78
CCDC43-205ENST00000592333 NSD3Q9BZ95 1437 aa26.15■■□□□ 1.78
CCDC43-205ENST00000592333 SHANK3Q9BYB0 1731 aa26.15■■□□□ 1.78
CCDC43-205ENST00000592333 TATP17735 454 aaPredicted RBP26.15■■□□□ 1.78
CCDC43-205ENST00000592333 SLC16A10Q8TF71 515 aa26.15■■□□□ 1.78
CCDC43-205ENST00000592333 AKT1S1Q96B36 256 aa26.14■■□□□ 1.78
CCDC43-205ENST00000592333 SGIP1Q9BQI5 828 aa26.14■■□□□ 1.78
CCDC43-205ENST00000592333 PCGF6Q9BYE7 350 aa26.14■■□□□ 1.78
CCDC43-205ENST00000592333 ATF5Q9Y2D1 282 aaPredicted RBP26.14■■□□□ 1.78
CCDC43-205ENST00000592333 SYTL4Q96C24 671 aaPredicted RBP26.13■■□□□ 1.77
CCDC43-205ENST00000592333 NSD2O96028 1365 aa26.12■■□□□ 1.77
CCDC43-205ENST00000592333 PCDH11XQ9BZA7 1347 aa26.12■■□□□ 1.77
CCDC43-205ENST00000592333 PCDH11YQ9BZA8 1340 aa26.12■■□□□ 1.77
CCDC43-205ENST00000592333 QSER1Q2KHR3 1735 aa26.11■■□□□ 1.77
CCDC43-205ENST00000592333 DOT1LQ8TEK3 1739 aa26.11■■□□□ 1.77
CCDC43-205ENST00000592333 ZNF827Q17R98 1081 aa26.1■■□□□ 1.77
CCDC43-205ENST00000592333 LY75O60449 1722 aa26.1■■□□□ 1.77
CCDC43-205ENST00000592333 NCAPD2Q15021 1401 aa26.09■■□□□ 1.77
CCDC43-205ENST00000592333 WASHC2AQ641Q2 1341 aa26.09■■□□□ 1.77
CCDC43-205ENST00000592333 MAP3K5Q99683 1374 aa26.08■■□□□ 1.77
CCDC43-205ENST00000592333 ANKRD26Q9UPS8 1709 aa26.08■■□□□ 1.77
CCDC43-205ENST00000592333 EIF4G2P78344 907 aaKnown RBP eCLIP26.08■■□□□ 1.77
CCDC43-205ENST00000592333 USHBP1Q8N6Y0 703 aa26.08■■□□□ 1.77
CCDC43-205ENST00000592333 SYT17Q9BSW7 474 aa26.07■■□□□ 1.76
CCDC43-205ENST00000592333 EMILIN1Q9Y6C2 1016 aa26.07■■□□□ 1.76
CCDC43-205ENST00000592333 YY1P25490 414 aa26.06■■□□□ 1.76
CCDC43-205ENST00000592333 ARXQ96QS3 562 aa26.06■■□□□ 1.76
CCDC43-205ENST00000592333 FHDC1Q9C0D6 1143 aaPredicted RBP26.05■■□□□ 1.76
CCDC43-205ENST00000592333 PLEKHG2Q9H7P9 1386 aa26.05■■□□□ 1.76
CCDC43-205ENST00000592333 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.04■■□□□ 1.768e-6■■■□□ 14.7
CCDC43-205ENST00000592333 TFCP2L1Q9NZI6 479 aa26.04■■□□□ 1.76
CCDC43-205ENST00000592333 CCNL1Q9UK58 526 aaPredicted RBP26.04■■□□□ 1.76
CCDC43-205ENST00000592333 PNPLA7Q6ZV29 1317 aa26.02■■□□□ 1.76
CCDC43-205ENST00000592333 COL24A1Q17RW2 1714 aa26.02■■□□□ 1.76
CCDC43-205ENST00000592333 NKX1-1Q15270 411 aaPredicted RBP26.01■■□□□ 1.75
CCDC43-205ENST00000592333 POLKQ9UBT6 870 aa26.01■■□□□ 1.75
CCDC43-205ENST00000592333 SPG7Q9UQ90 795 aa26.01■■□□□ 1.75
CCDC43-205ENST00000592333 PKD1L3Q7Z443 1732 aa26■■□□□ 1.75
CCDC43-205ENST00000592333 PPM1GO15355 546 aaPredicted RBP26■■□□□ 1.75
CCDC43-205ENST00000592333 CYP27B1O15528 508 aa26■■□□□ 1.75
CCDC43-205ENST00000592333 POLD1P28340 1107 aa26■■□□□ 1.75
CCDC43-205ENST00000592333 MAP2P11137 1827 aaKnown RBP26■■□□□ 1.75
CCDC43-205ENST00000592333 SMARCC1Q92922 1105 aaPredicted RBP25.98■■□□□ 1.75
CCDC43-205ENST00000592333 HSPA5P11021 654 aaKnown RBP25.97■■□□□ 1.75
CCDC43-205ENST00000592333 EYA1Q99502 592 aa25.97■■□□□ 1.75
CCDC43-205ENST00000592333 CCER1Q8TC90 406 aaPredicted RBP25.96■■□□□ 1.75
CCDC43-205ENST00000592333 KCNQ4P56696 695 aa25.95■■□□□ 1.74
CCDC43-205ENST00000592333 FLAD1Q8NFF5 587 aa25.95■■□□□ 1.74
CCDC43-205ENST00000592333 PALLDQ8WX93 1383 aa25.95■■□□□ 1.74
CCDC43-205ENST00000592333 MPRIPQ6WCQ1 1025 aa25.94■■□□□ 1.74
CCDC43-205ENST00000592333 POLR3GLQ9BT43 218 aa25.93■■□□□ 1.74
CCDC43-205ENST00000592333 PANK3Q9H999 370 aa25.93■■□□□ 1.74
CCDC43-205ENST00000592333 TUBGCP6Q96RT7 1819 aa25.93■■□□□ 1.74
CCDC43-205ENST00000592333 IFNL2Q8IZJ0 200 aa25.91■■□□□ 1.74
CCDC43-205ENST00000592333 C5P01031 1676 aa25.9■■□□□ 1.74
CCDC43-205ENST00000592333 ITGB4P16144 1822 aa25.89■■□□□ 1.74
CCDC43-205ENST00000592333 EIF4A2Q14240 407 aaKnown RBP25.89■■□□□ 1.74
CCDC43-205ENST00000592333 COL23A1Q86Y22 540 aaPredicted RBP25.89■■□□□ 1.74
CCDC43-205ENST00000592333 TOGARAM1Q9Y4F4 1720 aa25.88■■□□□ 1.73
CCDC43-205ENST00000592333 PIGBQ92521 554 aa25.88■■□□□ 1.73
CCDC43-205ENST00000592333 PHKG2P15735 406 aa25.87■■□□□ 1.73
CCDC43-205ENST00000592333 IGSF1Q8N6C5 1336 aa25.87■■□□□ 1.73
CCDC43-205ENST00000592333 TAF1LQ8IZX4 1826 aa25.86■■□□□ 1.73
CCDC43-205ENST00000592333 TNNT2P45379 298 aaPredicted RBP25.85■■□□□ 1.73
CCDC43-205ENST00000592333 TMOD3Q9NYL9 352 aa25.85■■□□□ 1.73
CCDC43-205ENST00000592333 UTRNP46939 3433 aa25.85■■□□□ 1.73
CCDC43-205ENST00000592333 MSH5O43196 834 aa25.83■■□□□ 1.73
CCDC43-205ENST00000592333 HSP90AB1P08238 724 aaKnown RBP25.82■■□□□ 1.72
CCDC43-205ENST00000592333 AMOTQ4VCS5 1084 aa25.82■■□□□ 1.72
CCDC43-205ENST00000592333 KNSTRNQ9Y448 316 aa25.82■■□□□ 1.72
CCDC43-205ENST00000592333 CHD4Q14839 1912 aa25.82■■□□□ 1.72
CCDC43-205ENST00000592333 C4BP0C0L5 1744 aa25.82■■□□□ 1.72
CCDC43-205ENST00000592333 LOC102724428A0A0B4J2F2 783 aa25.81■■□□□ 1.72
CCDC43-205ENST00000592333 SIK1P57059 783 aa25.81■■□□□ 1.72
CCDC43-205ENST00000592333 GPR162Q16538 588 aa25.81■■□□□ 1.72
CCDC43-205ENST00000592333 MORC1Q86VD1 984 aa25.81■■□□□ 1.72
CCDC43-205ENST00000592333 AK7Q96M32 723 aa25.81■■□□□ 1.72
CCDC43-205ENST00000592333 ERVV-2B6SEH9 535 aa25.8■■□□□ 1.72
CCDC43-205ENST00000592333 PLEKHO1Q53GL0 409 aaPredicted RBP25.79■■□□□ 1.72
CCDC43-205ENST00000592333 DCAF5Q96JK2 942 aa25.79■■□□□ 1.72
CCDC43-205ENST00000592333 SSFA2P28290 1259 aa25.78■■□□□ 1.72
CCDC43-205ENST00000592333 KLHL34Q8N239 644 aa25.77■■□□□ 1.72
CCDC43-205ENST00000592333 CD2APQ9Y5K6 639 aa25.77■■□□□ 1.72
CCDC43-205ENST00000592333 ZNF784Q8NCA9 323 aaPredicted RBP25.76■■□□□ 1.71
CCDC43-205ENST00000592333 ASAP1Q9ULH1 1129 aa25.75■■□□□ 1.71
CCDC43-205ENST00000592333 UBR3Q6ZT12 1888 aa25.74■■□□□ 1.71
CCDC43-205ENST00000592333 ZNF831Q5JPB2 1677 aa25.74■■□□□ 1.71
CCDC43-205ENST00000592333 GRIN3BO60391 1043 aa25.74■■□□□ 1.71
CCDC43-205ENST00000592333 ATG3Q9NT62 314 aa25.74■■□□□ 1.71
CCDC43-205ENST00000592333 ATP6V1AP38606 617 aa25.73■■□□□ 1.71
CCDC43-205ENST00000592333 NLGN2Q8NFZ4 835 aa25.73■■□□□ 1.71
CCDC43-205ENST00000592333 KDRP35968 1356 aa25.72■■□□□ 1.71
CCDC43-205ENST00000592333 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms