RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
SMAD4-214ENST00000592186 PLEKHO1Q53GL0 409 aaPredicted RBP14.13□□□□□ -0.15
SMAD4-214ENST00000592186 AEBP1Q8IUX7 1158 aa14.13□□□□□ -0.15
SMAD4-214ENST00000592186 RGPD5Q99666 1765 aa14.12□□□□□ -0.15
SMAD4-214ENST00000592186 MAPK8IP3Q9UPT6 1336 aa14.12□□□□□ -0.15
SMAD4-214ENST00000592186 ONECUT3O60422 494 aaPredicted RBP14.12□□□□□ -0.15
SMAD4-214ENST00000592186 RBM6P78332 1123 aaKnown RBP14.12□□□□□ -0.15
SMAD4-214ENST00000592186 SPG7Q9UQ90 795 aa14.12□□□□□ -0.15
SMAD4-214ENST00000592186 NRAPQ86VF7 1730 aa14.11□□□□□ -0.15
SMAD4-214ENST00000592186 NGEFQ8N5V2 710 aa14.11□□□□□ -0.15
SMAD4-214ENST00000592186 PLEKHF1Q96S99 279 aa14.11□□□□□ -0.15
SMAD4-214ENST00000592186 RGPD1P0DJD0 1748 aa14.1□□□□□ -0.15
SMAD4-214ENST00000592186 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.1□□□□□ -0.15
SMAD4-214ENST00000592186 EXOC5O00471 708 aa14.1□□□□□ -0.15
SMAD4-214ENST00000592186 RXRBP28702 533 aa14.1□□□□□ -0.15
SMAD4-214ENST00000592186 GAS2L2Q8NHY3 880 aa14.1□□□□□ -0.15
SMAD4-214ENST00000592186 ZCRB1Q8TBF4 217 aaKnown RBP14.1□□□□□ -0.15
SMAD4-214ENST00000592186 FAM98CQ17RN3 349 aaKnown RBP14.09□□□□□ -0.15
SMAD4-214ENST00000592186 RGS17Q9UGC6 210 aaPredicted RBP14.09□□□□□ -0.15
SMAD4-214ENST00000592186 DDB1Q16531 1140 aa14.08□□□□□ -0.16
SMAD4-214ENST00000592186 PHACTR3Q96KR7 559 aa14.08□□□□□ -0.16
SMAD4-214ENST00000592186 OVOS2A0A0G2JMS6 1433 aa14.07□□□□□ -0.16
SMAD4-214ENST00000592186 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
SMAD4-214ENST00000592186 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
SMAD4-214ENST00000592186 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
SMAD4-214ENST00000592186 HTATSF1O43719 755 aaKnown RBP14.06□□□□□ -0.16
SMAD4-214ENST00000592186 HSP90AB1P08238 724 aaKnown RBP14.06□□□□□ -0.16
SMAD4-214ENST00000592186 NFE2L2Q16236 605 aa14.06□□□□□ -0.16
SMAD4-214ENST00000592186 MTHFSDQ2M296 383 aaKnown RBP14.06□□□□□ -0.16
SMAD4-214ENST00000592186 C1orf141Q5JVX7 400 aa14.06□□□□□ -0.16
SMAD4-214ENST00000592186 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
SMAD4-214ENST00000592186 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
SMAD4-214ENST00000592186 A0A0G2JS52 829 aa14.05□□□□□ -0.16
SMAD4-214ENST00000592186 APAF1O14727 1248 aa14.05□□□□□ -0.16
SMAD4-214ENST00000592186 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
SMAD4-214ENST00000592186 LMOD3Q0VAK6 560 aa14.05□□□□□ -0.16
SMAD4-214ENST00000592186 PDE3BQ13370 1112 aa14.05□□□□□ -0.16
SMAD4-214ENST00000592186 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
SMAD4-214ENST00000592186 PCDH11XQ9BZA7 1347 aa14.05□□□□□ -0.16
SMAD4-214ENST00000592186 PCDH11YQ9BZA8 1340 aa14.05□□□□□ -0.16
SMAD4-214ENST00000592186 GNAT3A8MTJ3 354 aa14.04□□□□□ -0.16
SMAD4-214ENST00000592186 RIPK4P57078 832 aa14.04□□□□□ -0.16
SMAD4-214ENST00000592186 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
SMAD4-214ENST00000592186 POTEAQ6S8J7 498 aa14.04□□□□□ -0.16
SMAD4-214ENST00000592186 SEPT12Q8IYM1 358 aa14.04□□□□□ -0.16
SMAD4-214ENST00000592186 MEGF6O75095 1541 aa14.04□□□□□ -0.16
SMAD4-214ENST00000592186 RGPD2P0DJD1 1756 aa14.03□□□□□ -0.16
SMAD4-214ENST00000592186 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
SMAD4-214ENST00000592186 RTF1Q92541 710 aaKnown RBP14.03□□□□□ -0.16
SMAD4-214ENST00000592186 NKX1-1Q15270 411 aaPredicted RBP14.02□□□□□ -0.17
SMAD4-214ENST00000592186 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
SMAD4-214ENST00000592186 GLI3P10071 1580 aa14.01□□□□□ -0.17
SMAD4-214ENST00000592186 PHKG2P15735 406 aa14.01□□□□□ -0.17
SMAD4-214ENST00000592186 NEUROD2Q15784 382 aa14.01□□□□□ -0.17
SMAD4-214ENST00000592186 DCAF5Q96JK2 942 aa14.01□□□□□ -0.17
SMAD4-214ENST00000592186 PARP4Q9UKK3 1724 aaKnown RBP14□□□□□ -0.17
SMAD4-214ENST00000592186 CYP27B1O15528 508 aa14□□□□□ -0.17
SMAD4-214ENST00000592186 CALD1Q05682 793 aaKnown RBP14□□□□□ -0.17
SMAD4-214ENST00000592186 TNS2Q63HR2 1409 aa14□□□□□ -0.17
SMAD4-214ENST00000592186 KRT27Q7Z3Y8 459 aa13.99□□□□□ -0.17
SMAD4-214ENST00000592186 RRP7AQ9Y3A4 280 aaKnown RBP13.99□□□□□ -0.17
SMAD4-214ENST00000592186 MAP3K5Q99683 1374 aa13.99□□□□□ -0.17
SMAD4-214ENST00000592186 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
SMAD4-214ENST00000592186 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMAD4-214ENST00000592186 MARCH10Q8NA82 808 aaPredicted RBP13.98□□□□□ -0.17
SMAD4-214ENST00000592186 WDR63Q8IWG1 891 aa13.97□□□□□ -0.17
SMAD4-214ENST00000592186 TRIM35Q9UPQ4 493 aa13.97□□□□□ -0.17
SMAD4-214ENST00000592186 THSD7AQ9UPZ6 1657 aa13.97□□□□□ -0.17
SMAD4-214ENST00000592186 MPRIPQ6WCQ1 1025 aa13.96□□□□□ -0.17
SMAD4-214ENST00000592186 FAM196AQ6ZSG2 479 aa13.96□□□□□ -0.17
SMAD4-214ENST00000592186 WWC1Q8IX03 1113 aa13.96□□□□□ -0.17
SMAD4-214ENST00000592186 IL17REQ8NFR9 667 aa13.96□□□□□ -0.17
SMAD4-214ENST00000592186 PKD1L3Q7Z443 1732 aa13.95□□□□□ -0.18
SMAD4-214ENST00000592186 RNMTO43148 476 aaKnown RBP13.95□□□□□ -0.18
SMAD4-214ENST00000592186 TEFQ10587 303 aa13.95□□□□□ -0.18
SMAD4-214ENST00000592186 BCL9O00512 1426 aa13.95□□□□□ -0.18
SMAD4-214ENST00000592186 CABP4P57796 275 aa13.94□□□□□ -0.18
SMAD4-214ENST00000592186 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
SMAD4-214ENST00000592186 BABAM1Q9NWV8 329 aa13.94□□□□□ -0.18
SMAD4-214ENST00000592186 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
SMAD4-214ENST00000592186 CEMIPQ8WUJ3 1361 aa13.94□□□□□ -0.18
SMAD4-214ENST00000592186 WNK3Q9BYP7 1800 aa13.94□□□□□ -0.18
SMAD4-214ENST00000592186 IL16Q14005 1332 aa13.94□□□□□ -0.18
SMAD4-214ENST00000592186 TAF7Q15545 349 aaPredicted RBP13.93□□□□□ -0.18
SMAD4-214ENST00000592186 MCM10Q7L590 875 aa13.93□□□□□ -0.18
SMAD4-214ENST00000592186 ZBED9Q6R2W3 1325 aa13.93□□□□□ -0.18
SMAD4-214ENST00000592186 SLC52A2Q9HAB3 445 aa13.92□□□□□ -0.18
SMAD4-214ENST00000592186 LRRC37A3O60309 1634 aa13.92□□□□□ -0.18
SMAD4-214ENST00000592186 GNAI1P63096 354 aa13.91□□□□□ -0.18
SMAD4-214ENST00000592186 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
SMAD4-214ENST00000592186 DCTN1Q14203 1278 aa13.91□□□□□ -0.18
SMAD4-214ENST00000592186 NFATC2IPQ8NCF5 419 aa13.91□□□□□ -0.18
SMAD4-214ENST00000592186 TMOD3Q9NYL9 352 aa13.91□□□□□ -0.18
SMAD4-214ENST00000592186 RGS12O14924 1447 aa13.91□□□□□ -0.18
SMAD4-214ENST00000592186 ZNF521Q96K83 1311 aa13.91□□□□□ -0.18
SMAD4-214ENST00000592186 PRIM1P49642 420 aaKnown RBP13.9□□□□□ -0.18
SMAD4-214ENST00000592186 CFAP44Q96MT7 982 aa13.9□□□□□ -0.18
SMAD4-214ENST00000592186 IFT57Q9NWB7 429 aa13.9□□□□□ -0.18
SMAD4-214ENST00000592186 KDM6AO15550 1401 aaPredicted RBP13.9□□□□□ -0.18
SMAD4-214ENST00000592186 SENP3-EIF4A1A0A087X0R7 540 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms