RNA–Protein interactions for RNA: ENST00000591764.1

DNMT1-224, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 341 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-224ENST00000591764 ABCA3Q99758 1704 aa12.13□□□□□ -0.47
DNMT1-224ENST00000591764 RGPD8O14715 1765 aaPredicted RBP12.13□□□□□ -0.47
DNMT1-224ENST00000591764 LRP5O75197 1615 aa12.12□□□□□ -0.47
DNMT1-224ENST00000591764 TK2O00142 265 aa12.12□□□□□ -0.47
DNMT1-224ENST00000591764 HRO43593 1189 aa12.12□□□□□ -0.47
DNMT1-224ENST00000591764 C14orf93Q9H972 538 aaKnown RBP12.12□□□□□ -0.47
DNMT1-224ENST00000591764 POGKQ9P215 609 aa12.12□□□□□ -0.47
DNMT1-224ENST00000591764 GPRASP1Q5JY77 1395 aa12.12□□□□□ -0.47
DNMT1-224ENST00000591764 DEFB132Q7Z7B7 95 aa12.11□□□□□ -0.47
DNMT1-224ENST00000591764 PRAM1Q96QH2 718 aa12.11□□□□□ -0.47
DNMT1-224ENST00000591764 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
DNMT1-224ENST00000591764 DLC1Q96QB1 1528 aa12.11□□□□□ -0.47
DNMT1-224ENST00000591764 ADGRB2O60241 1585 aa12.1□□□□□ -0.47
DNMT1-224ENST00000591764 ONECUT3O60422 494 aaPredicted RBP12.1□□□□□ -0.47
DNMT1-224ENST00000591764 EVI5O60447 810 aa12.1□□□□□ -0.47
DNMT1-224ENST00000591764 FOSBP53539 338 aa12.1□□□□□ -0.47
DNMT1-224ENST00000591764 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
DNMT1-224ENST00000591764 CABLES1Q8TDN4 633 aa12.1□□□□□ -0.47
DNMT1-224ENST00000591764 ANO8Q9HCE9 1232 aaPredicted RBP12.1□□□□□ -0.47
DNMT1-224ENST00000591764 COL14A1Q05707 1796 aaKnown RBP12.08□□□□□ -0.48
DNMT1-224ENST00000591764 CFAP70Q5T0N1 1121 aa12.08□□□□□ -0.48
DNMT1-224ENST00000591764 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
DNMT1-224ENST00000591764 FAM83GA6ND36 823 aa12.07□□□□□ -0.48
DNMT1-224ENST00000591764 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
DNMT1-224ENST00000591764 NRAPQ86VF7 1730 aa12.07□□□□□ -0.48
DNMT1-224ENST00000591764 PMFBP1Q8TBY8 1022 aa12.07□□□□□ -0.48
DNMT1-224ENST00000591764 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
DNMT1-224ENST00000591764 BTG4Q9NY30 223 aa12.07□□□□□ -0.48
DNMT1-224ENST00000591764 TULP4Q9NRJ4 1543 aa12.06□□□□□ -0.48
DNMT1-224ENST00000591764 TRPM3Q9HCF6 1732 aaPredicted RBP12.06□□□□□ -0.48
DNMT1-224ENST00000591764 ALS2Q96Q42 1657 aa12.05□□□□□ -0.48
DNMT1-224ENST00000591764 ITSN1Q15811 1721 aa12.04□□□□□ -0.48
DNMT1-224ENST00000591764 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
DNMT1-224ENST00000591764 NGDNQ8NEJ9 315 aaKnown RBP12.04□□□□□ -0.48
DNMT1-224ENST00000591764 STAC3Q96MF2 364 aa12.04□□□□□ -0.48
DNMT1-224ENST00000591764 PRDM11Q9NQV5 511 aa12.04□□□□□ -0.48
DNMT1-224ENST00000591764 VPS9D1Q9Y2B5 631 aa12.04□□□□□ -0.48
DNMT1-224ENST00000591764 DISP2A7MBM2 1401 aa12.03□□□□□ -0.48
DNMT1-224ENST00000591764 HRCP23327 699 aa12.03□□□□□ -0.48
DNMT1-224ENST00000591764 HIRIP3Q9BW71 556 aaPredicted RBP12.03□□□□□ -0.48
DNMT1-224ENST00000591764 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
DNMT1-224ENST00000591764 ADGRB1O14514 1584 aa12.02□□□□□ -0.49
DNMT1-224ENST00000591764 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-224ENST00000591764 ADAM33Q9BZ11 813 aa12.02□□□□□ -0.49
DNMT1-224ENST00000591764 SPATA31A5Q5VU36 1347 aa12.02□□□□□ -0.49
DNMT1-224ENST00000591764 SPATA31A7Q8IWB4 1347 aa12.02□□□□□ -0.49
DNMT1-224ENST00000591764 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
DNMT1-224ENST00000591764 ATP7BP35670 1465 aa12.02□□□□□ -0.49
DNMT1-224ENST00000591764 WASLO00401 505 aaPredicted RBP12.01□□□□□ -0.49
DNMT1-224ENST00000591764 PARD3Q8TEW0 1356 aa12.01□□□□□ -0.49
DNMT1-224ENST00000591764 THSD7AQ9UPZ6 1657 aa12□□□□□ -0.49
DNMT1-224ENST00000591764 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
DNMT1-224ENST00000591764 FAM196AQ6ZSG2 479 aa12□□□□□ -0.49
DNMT1-224ENST00000591764 PTPREP23469 700 aa11.99□□□□□ -0.49
DNMT1-224ENST00000591764 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
DNMT1-224ENST00000591764 KCTD12Q96CX2 325 aaKnown RBP11.99□□□□□ -0.49
DNMT1-224ENST00000591764 HCSTQ9UBK5 93 aa11.99□□□□□ -0.49
DNMT1-224ENST00000591764 CRYBG1Q9Y4K1 1723 aa11.99□□□□□ -0.49
DNMT1-224ENST00000591764 TNS1Q9HBL0 1735 aaKnown RBP11.98□□□□□ -0.49
DNMT1-224ENST00000591764 R3HDM1Q15032 1099 aaKnown RBP11.98□□□□□ -0.49
DNMT1-224ENST00000591764 DCAF11Q8TEB1 546 aa11.98□□□□□ -0.49
DNMT1-224ENST00000591764 KIAA0232Q92628 1395 aa11.97□□□□□ -0.49
DNMT1-224ENST00000591764 SPATA31A1Q5TZJ5 1347 aa11.97□□□□□ -0.49
DNMT1-224ENST00000591764 PRR36Q9H6K5 1346 aa11.97□□□□□ -0.49
DNMT1-224ENST00000591764 ZBED2Q9BTP6 218 aa11.97□□□□□ -0.49
DNMT1-224ENST00000591764 KDM2AQ9Y2K7 1162 aa11.97□□□□□ -0.49
DNMT1-224ENST00000591764 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
DNMT1-224ENST00000591764 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.49
DNMT1-224ENST00000591764 EVA1CP58658 441 aa11.96□□□□□ -0.49
DNMT1-224ENST00000591764 PDE3BQ13370 1112 aa11.96□□□□□ -0.49
DNMT1-224ENST00000591764 CAMK2BQ13554 666 aa11.96□□□□□ -0.49
DNMT1-224ENST00000591764 SLC4A5Q9BY07 1137 aa11.96□□□□□ -0.49
DNMT1-224ENST00000591764 STRN4Q9NRL3 753 aa11.96□□□□□ -0.49
DNMT1-224ENST00000591764 ARHGEF28Q8N1W1 1705 aaKnown RBP11.96□□□□□ -0.49
DNMT1-224ENST00000591764 PHRF1Q9P1Y6 1649 aaKnown RBP11.96□□□□□ -0.5
DNMT1-224ENST00000591764 RAB3GAP2Q9H2M9 1393 aa11.95□□□□□ -0.5
DNMT1-224ENST00000591764 TRIM37O94972 964 aa11.95□□□□□ -0.5
DNMT1-224ENST00000591764 NBPF8Q3BBV2 869 aa11.95□□□□□ -0.5
DNMT1-224ENST00000591764 FAM182BQ5T319 152 aa11.95□□□□□ -0.5
DNMT1-224ENST00000591764 NBPF14Q5TI25 921 aa11.95□□□□□ -0.5
DNMT1-224ENST00000591764 APBA3O96018 575 aa11.94□□□□□ -0.5
DNMT1-224ENST00000591764 EZH2Q15910 746 aaKnown RBP11.94□□□□□ -0.5
DNMT1-224ENST00000591764 BARGINQ6ZT62 677 aa11.94□□□□□ -0.5
DNMT1-224ENST00000591764 NUDT16Q96DE0 195 aaKnown RBP11.94□□□□□ -0.5
DNMT1-224ENST00000591764 USP35Q9P2H5 1018 aa11.94□□□□□ -0.5
DNMT1-224ENST00000591764 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
DNMT1-224ENST00000591764 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
DNMT1-224ENST00000591764 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
DNMT1-224ENST00000591764 CAMKK2Q96RR4 588 aa11.93□□□□□ -0.5
DNMT1-224ENST00000591764 SSH2Q76I76 1423 aa11.93□□□□□ -0.5
DNMT1-224ENST00000591764 POLR3AO14802 1390 aaPredicted RBP11.92□□□□□ -0.5
DNMT1-224ENST00000591764 DPYSL4O14531 572 aa11.92□□□□□ -0.5
DNMT1-224ENST00000591764 TCP11L2Q8N4U5 519 aa11.92□□□□□ -0.5
DNMT1-224ENST00000591764 PLA2G2EQ9NZK7 142 aa11.92□□□□□ -0.5
DNMT1-224ENST00000591764 THRAP3Q9Y2W1 955 aaKnown RBP11.92□□□□□ -0.5
DNMT1-224ENST00000591764 TOPAZ1Q8N9V7 1692 aa11.91□□□□□ -0.5
DNMT1-224ENST00000591764 ABTB2Q8N961 1025 aa11.91□□□□□ -0.5
DNMT1-224ENST00000591764 NRKQ7Z2Y5 1582 aa11.91□□□□□ -0.5
DNMT1-224ENST00000591764 CPDO75976 1380 aa11.91□□□□□ -0.5
DNMT1-224ENST00000591764 RREB1Q92766 1687 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms