RNA–Protein interactions for RNA: ENST00000591535.5

MBD1-225, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-225ENST00000591535 TNS2Q63HR2 1409 aa18.88■□□□□ 0.61
MBD1-225ENST00000591535 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
MBD1-225ENST00000591535 NCAPD2Q15021 1401 aa18.87■□□□□ 0.61
MBD1-225ENST00000591535 MARCH10Q8NA82 808 aaPredicted RBP18.87■□□□□ 0.61
MBD1-225ENST00000591535 RGPD1P0DJD0 1748 aa18.87■□□□□ 0.61
MBD1-225ENST00000591535 FAM196AQ6ZSG2 479 aa18.86■□□□□ 0.61
MBD1-225ENST00000591535 SPG7Q9UQ90 795 aa18.85■□□□□ 0.61
MBD1-225ENST00000591535 SOCS7O14512 581 aa18.85■□□□□ 0.61
MBD1-225ENST00000591535 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
MBD1-225ENST00000591535 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
MBD1-225ENST00000591535 KDRP35968 1356 aa18.83■□□□□ 0.6
MBD1-225ENST00000591535 KAT6BQ8WYB5 2073 aa18.83■□□□□ 0.6
MBD1-225ENST00000591535 PLEKHO1Q53GL0 409 aaPredicted RBP18.82■□□□□ 0.6
MBD1-225ENST00000591535 PCDH11XQ9BZA7 1347 aa18.82■□□□□ 0.6
MBD1-225ENST00000591535 PCDH11YQ9BZA8 1340 aa18.82■□□□□ 0.6
MBD1-225ENST00000591535 UPF1Q92900 1129 aaKnown RBP eCLIP18.82■□□□□ 0.6
MBD1-225ENST00000591535 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.82■□□□□ 0.6
MBD1-225ENST00000591535 TRIM37O94972 964 aa18.8■□□□□ 0.6
MBD1-225ENST00000591535 SF3B2Q13435 895 aaKnown RBP18.8■□□□□ 0.6
MBD1-225ENST00000591535 AMOTQ4VCS5 1084 aa18.8■□□□□ 0.6
MBD1-225ENST00000591535 PKD1L3Q7Z443 1732 aa18.8■□□□□ 0.6
MBD1-225ENST00000591535 SHANK3Q9BYB0 1731 aa18.8■□□□□ 0.6
MBD1-225ENST00000591535 CYP27B1O15528 508 aa18.78■□□□□ 0.6
MBD1-225ENST00000591535 ACSBG1Q96GR2 724 aa18.78■□□□□ 0.6
MBD1-225ENST00000591535 PRKAR2BP31323 418 aa18.78■□□□□ 0.6
MBD1-225ENST00000591535 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
MBD1-225ENST00000591535 ZNF530Q6P9A1 599 aaPredicted RBP18.78■□□□□ 0.6
MBD1-225ENST00000591535 CCDC125Q86Z20 511 aa18.78■□□□□ 0.6
MBD1-225ENST00000591535 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
MBD1-225ENST00000591535 FCHSD2O94868 740 aa18.77■□□□□ 0.6
MBD1-225ENST00000591535 RSPH6AQ9H0K4 717 aa18.77■□□□□ 0.6
MBD1-225ENST00000591535 PLEKHG2Q9H7P9 1386 aa18.76■□□□□ 0.59
MBD1-225ENST00000591535 C1orf141Q5JVX7 400 aa18.76■□□□□ 0.59
MBD1-225ENST00000591535 DIEXFQ68CQ4 756 aaKnown RBP18.76■□□□□ 0.59
MBD1-225ENST00000591535 SBF2Q86WG5 1849 aa18.75■□□□□ 0.59
MBD1-225ENST00000591535 NEFMP07197 916 aa18.75■□□□□ 0.59
MBD1-225ENST00000591535 PHKG2P15735 406 aa18.75■□□□□ 0.59
MBD1-225ENST00000591535 SYTL4Q96C24 671 aaPredicted RBP18.75■□□□□ 0.59
MBD1-225ENST00000591535 BCL9O00512 1426 aa18.74■□□□□ 0.59
MBD1-225ENST00000591535 KCNQ2O43526 872 aa18.74■□□□□ 0.59
MBD1-225ENST00000591535 MTHFSDQ2M296 383 aaKnown RBP18.74■□□□□ 0.59
MBD1-225ENST00000591535 PNNQ9H307 717 aaKnown RBP18.74■□□□□ 0.59
MBD1-225ENST00000591535 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
MBD1-225ENST00000591535 APBA3O96018 575 aa18.73■□□□□ 0.59
MBD1-225ENST00000591535 CCDC184Q52MB2 194 aa18.73■□□□□ 0.59
MBD1-225ENST00000591535 PHACTR3Q96KR7 559 aa18.73■□□□□ 0.59
MBD1-225ENST00000591535 BCL11BQ9C0K0 894 aaPredicted RBP18.73■□□□□ 0.59
MBD1-225ENST00000591535 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
MBD1-225ENST00000591535 PRIM1P49642 420 aaKnown RBP18.72■□□□□ 0.59
MBD1-225ENST00000591535 NKX1-1Q15270 411 aaPredicted RBP18.71■□□□□ 0.59
MBD1-225ENST00000591535 PTF1AQ7RTS3 328 aa18.71■□□□□ 0.59
MBD1-225ENST00000591535 DOT1LQ8TEK3 1739 aa18.71■□□□□ 0.59
MBD1-225ENST00000591535 BAG6P46379 1132 aa18.71■□□□□ 0.58
MBD1-225ENST00000591535 AKAP4Q5JQC9 854 aa18.71■□□□□ 0.58
MBD1-225ENST00000591535 GAS2L2Q8NHY3 880 aa18.71■□□□□ 0.58
MBD1-225ENST00000591535 MAPK8IP3Q9UPT6 1336 aa18.7■□□□□ 0.58
MBD1-225ENST00000591535 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
MBD1-225ENST00000591535 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
MBD1-225ENST00000591535 ADAMTS8Q9UP79 889 aa18.7■□□□□ 0.58
MBD1-225ENST00000591535 TNS1Q9HBL0 1735 aaKnown RBP18.69■□□□□ 0.58
MBD1-225ENST00000591535 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
MBD1-225ENST00000591535 NHSQ6T4R5 1651 aa18.69■□□□□ 0.58
MBD1-225ENST00000591535 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
MBD1-225ENST00000591535 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
MBD1-225ENST00000591535 PLEKHF1Q96S99 279 aa18.67■□□□□ 0.58
MBD1-225ENST00000591535 GNAT3A8MTJ3 354 aa18.66■□□□□ 0.58
MBD1-225ENST00000591535 TMOD3Q9NYL9 352 aa18.66■□□□□ 0.58
MBD1-225ENST00000591535 ITGB4P16144 1822 aa18.65■□□□□ 0.58
MBD1-225ENST00000591535 TOGARAM1Q9Y4F4 1720 aa18.65■□□□□ 0.58
MBD1-225ENST00000591535 CABP4P57796 275 aa18.65■□□□□ 0.58
MBD1-225ENST00000591535 BTAF1O14981 1849 aa18.65■□□□□ 0.58
MBD1-225ENST00000591535 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
MBD1-225ENST00000591535 PNISRQ8TF01 805 aaKnown RBP18.64■□□□□ 0.57
MBD1-225ENST00000591535 LGR6Q9HBX8 967 aa18.64■□□□□ 0.57
MBD1-225ENST00000591535 MAP3K5Q99683 1374 aa18.64■□□□□ 0.57
MBD1-225ENST00000591535 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
MBD1-225ENST00000591535 RTF1Q92541 710 aaKnown RBP18.63■□□□□ 0.57
MBD1-225ENST00000591535 RUNDC1Q96C34 613 aa18.63■□□□□ 0.57
MBD1-225ENST00000591535 RNMTO43148 476 aaKnown RBP18.63■□□□□ 0.57
MBD1-225ENST00000591535 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
MBD1-225ENST00000591535 SCN11AQ9UI33 1791 aa18.62■□□□□ 0.57
MBD1-225ENST00000591535 VIRMAQ69YN4 1812 aaKnown RBP18.62■□□□□ 0.57
MBD1-225ENST00000591535 PLSCR1O15162 318 aa18.62■□□□□ 0.57
MBD1-225ENST00000591535 NFE2L2Q16236 605 aa18.62■□□□□ 0.57
MBD1-225ENST00000591535 PIGBQ92521 554 aa18.62■□□□□ 0.57
MBD1-225ENST00000591535 FAM9BQ8IZU0 186 aa18.61■□□□□ 0.57
MBD1-225ENST00000591535 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
MBD1-225ENST00000591535 CAMKK2Q96RR4 588 aa18.61■□□□□ 0.57
MBD1-225ENST00000591535 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
MBD1-225ENST00000591535 MIER1Q8N108 512 aa18.6■□□□□ 0.57
MBD1-225ENST00000591535 DLG5Q8TDM6 1919 aa18.59■□□□□ 0.57
MBD1-225ENST00000591535 RIPK4P57078 832 aa18.59■□□□□ 0.57
MBD1-225ENST00000591535 TEFQ10587 303 aa18.59■□□□□ 0.57
MBD1-225ENST00000591535 MCM10Q7L590 875 aa18.59■□□□□ 0.57
MBD1-225ENST00000591535 IL17REQ8NFR9 667 aa18.59■□□□□ 0.57
MBD1-225ENST00000591535 SLC52A2Q9HAB3 445 aa18.59■□□□□ 0.57
MBD1-225ENST00000591535 RRP7AQ9Y3A4 280 aaKnown RBP18.59■□□□□ 0.57
MBD1-225ENST00000591535 CCER2I3L3R5 266 aa18.58■□□□□ 0.56
MBD1-225ENST00000591535 HTATSF1O43719 755 aaKnown RBP18.57■□□□□ 0.56
MBD1-225ENST00000591535 TMPOP42166 694 aaKnown RBP18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms