RNA–Protein interactions for RNA: ENST00000591043.1

GCDH-214, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 1,764 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-214ENST00000591043 ZBTB40Q9NUA8 1239 aa25.83■■□□□ 1.73
GCDH-214ENST00000591043 LRRC37A3O60309 1634 aa25.83■■□□□ 1.73
GCDH-214ENST00000591043 ILDR2Q71H61 639 aa25.82■■□□□ 1.72
GCDH-214ENST00000591043 TSPYL6Q8N831 410 aa25.82■■□□□ 1.72
GCDH-214ENST00000591043 DDRGK1Q96HY6 314 aa25.82■■□□□ 1.72
GCDH-214ENST00000591043 ABCC4O15439 1325 aa25.81■■□□□ 1.72
GCDH-214ENST00000591043 DCTN1Q14203 1278 aa25.81■■□□□ 1.72
GCDH-214ENST00000591043 SKAP1Q86WV1 359 aa25.81■■□□□ 1.72
GCDH-214ENST00000591043 C8orf58Q8NAV2 365 aa25.81■■□□□ 1.72
GCDH-214ENST00000591043 IP6K1Q92551 441 aa25.81■■□□□ 1.72
GCDH-214ENST00000591043 C8orf34Q49A92 452 aa25.8■■□□□ 1.72
GCDH-214ENST00000591043 SLIT3O75094 1523 aa25.8■■□□□ 1.72
GCDH-214ENST00000591043 MTHFSDQ2M296 383 aaKnown RBP25.79■■□□□ 1.72
GCDH-214ENST00000591043 DCCP43146 1447 aa25.79■■□□□ 1.72
GCDH-214ENST00000591043 SOS1Q07889 1333 aaPredicted RBP25.79■■□□□ 1.72
GCDH-214ENST00000591043 PROSER2Q86WR7 435 aaPredicted RBP25.79■■□□□ 1.72
GCDH-214ENST00000591043 BABAM1Q9NWV8 329 aa25.79■■□□□ 1.72
GCDH-214ENST00000591043 ZBTB47Q9UFB7 747 aaPredicted RBP25.79■■□□□ 1.72
GCDH-214ENST00000591043 TRPM3Q9HCF6 1732 aaPredicted RBP25.79■■□□□ 1.72
GCDH-214ENST00000591043 MST1RQ04912 1400 aa25.79■■□□□ 1.72
GCDH-214ENST00000591043 C19orf44Q9H6X5 657 aa25.78■■□□□ 1.72
GCDH-214ENST00000591043 MCM10Q7L590 875 aa25.77■■□□□ 1.72
GCDH-214ENST00000591043 PDZRN3Q9UPQ7 1066 aa25.77■■□□□ 1.72
GCDH-214ENST00000591043 NUTM2GQ5VZR2 741 aa25.77■■□□□ 1.72
GCDH-214ENST00000591043 PTPRCP08575 1304 aa25.75■■□□□ 1.71
GCDH-214ENST00000591043 CACNA1FO60840 1977 aa25.75■■□□□ 1.71
GCDH-214ENST00000591043 GNAT3A8MTJ3 354 aa25.74■■□□□ 1.71
GCDH-214ENST00000591043 SMC5Q8IY18 1101 aa25.74■■□□□ 1.71
GCDH-214ENST00000591043 ELL2O00472 640 aaPredicted RBP25.74■■□□□ 1.71
GCDH-214ENST00000591043 C1orf167Q5SNV9 1468 aa25.74■■□□□ 1.71
GCDH-214ENST00000591043 MAP3K5Q99683 1374 aa25.73■■□□□ 1.71
GCDH-214ENST00000591043 ZBTB7BO15156 539 aaPredicted RBP25.72■■□□□ 1.71
GCDH-214ENST00000591043 NPM2Q86SE8 214 aaKnown RBP25.72■■□□□ 1.71
GCDH-214ENST00000591043 RBM33Q96EV2 1170 aaKnown RBP25.72■■□□□ 1.71
GCDH-214ENST00000591043 TSPYL4Q9UJ04 414 aa25.71■■□□□ 1.71
GCDH-214ENST00000591043 USP19O94966 1318 aa25.71■■□□□ 1.71
GCDH-214ENST00000591043 LTBP4Q8N2S1 1624 aa25.7■■□□□ 1.7
GCDH-214ENST00000591043 INTS3Q68E01 1043 aaKnown RBP25.68■■□□□ 1.7
GCDH-214ENST00000591043 GCC1Q96CN9 775 aa25.68■■□□□ 1.7
GCDH-214ENST00000591043 ORAI2Q96SN7 254 aa25.68■■□□□ 1.7
GCDH-214ENST00000591043 ALS2Q96Q42 1657 aa25.68■■□□□ 1.7
GCDH-214ENST00000591043 CAMTA1Q9Y6Y1 1673 aa25.67■■□□□ 1.7
GCDH-214ENST00000591043 FOXO3O43524 673 aa25.67■■□□□ 1.7
GCDH-214ENST00000591043 NCAPD2Q15021 1401 aa25.66■■□□□ 1.7
GCDH-214ENST00000591043 ATF3P18847 181 aa25.66■■□□□ 1.7
GCDH-214ENST00000591043 KRT28Q7Z3Y7 464 aa25.66■■□□□ 1.7
GCDH-214ENST00000591043 CHMP4AQ9BY43 222 aa25.66■■□□□ 1.7
GCDH-214ENST00000591043 GCP02774 474 aa25.65■■□□□ 1.7
GCDH-214ENST00000591043 ARHGEF25Q86VW2 580 aa25.65■■□□□ 1.7
GCDH-214ENST00000591043 LMO7Q8WWI1 1683 aa25.65■■□□□ 1.7
GCDH-214ENST00000591043 MSH6P52701 1360 aa25.64■■□□□ 1.7
GCDH-214ENST00000591043 LTV1Q96GA3 475 aaPredicted RBP25.64■■□□□ 1.7
GCDH-214ENST00000591043 STRCP1A6NGW2 1772 aa25.63■■□□□ 1.69
GCDH-214ENST00000591043 TAF7Q15545 349 aaPredicted RBP25.62■■□□□ 1.69
GCDH-214ENST00000591043 FAM208AQ9UK61 1670 aaKnown RBP25.62■■□□□ 1.69
GCDH-214ENST00000591043 NUCB1Q02818 461 aa25.61■■□□□ 1.69
GCDH-214ENST00000591043 RGS12O14924 1447 aa25.61■■□□□ 1.69
GCDH-214ENST00000591043 TMEM94Q12767 1356 aa25.61■■□□□ 1.69
GCDH-214ENST00000591043 MED1Q15648 1581 aaPredicted RBP25.61■■□□□ 1.69
GCDH-214ENST00000591043 AMOTQ4VCS5 1084 aa25.61■■□□□ 1.69
GCDH-214ENST00000591043 RGPD2P0DJD1 1756 aa25.61■■□□□ 1.69
GCDH-214ENST00000591043 OVOS2A0A0G2JMS6 1433 aa25.61■■□□□ 1.69
GCDH-214ENST00000591043 CADPS2Q86UW7 1296 aa25.6■■□□□ 1.69
GCDH-214ENST00000591043 STK31Q9BXU1 1019 aa25.6■■□□□ 1.69
GCDH-214ENST00000591043 UPF2Q9HAU5 1272 aaKnown RBP25.6■■□□□ 1.69
GCDH-214ENST00000591043 CEMIPQ8WUJ3 1361 aa25.6■■□□□ 1.69
GCDH-214ENST00000591043 ABCC6O95255 1503 aa25.6■■□□□ 1.69
GCDH-214ENST00000591043 ZNF335Q9H4Z2 1342 aaPredicted RBP25.6■■□□□ 1.69
GCDH-214ENST00000591043 SOCS7O14512 581 aa25.59■■□□□ 1.69
GCDH-214ENST00000591043 PLEKHO1Q53GL0 409 aaPredicted RBP25.59■■□□□ 1.69
GCDH-214ENST00000591043 CCDC30Q5VVM6 783 aa25.59■■□□□ 1.69
GCDH-214ENST00000591043 NBPF6Q5VWK0 638 aa25.59■■□□□ 1.69
GCDH-214ENST00000591043 NBPF4Q96M43 638 aa25.59■■□□□ 1.69
GCDH-214ENST00000591043 KRT24Q2M2I5 525 aa25.57■■□□□ 1.68
GCDH-214ENST00000591043 IL17REQ8NFR9 667 aa25.57■■□□□ 1.68
GCDH-214ENST00000591043 N4BP2Q86UW6 1770 aaPredicted RBP25.57■■□□□ 1.68
GCDH-214ENST00000591043 PLEKHG2Q9H7P9 1386 aa25.57■■□□□ 1.68
GCDH-214ENST00000591043 SLC4A2P04920 1241 aa25.56■■□□□ 1.68
GCDH-214ENST00000591043 CCT4P50991 539 aaKnown RBP25.56■■□□□ 1.68
GCDH-214ENST00000591043 CHD1LQ86WJ1 897 aa25.56■■□□□ 1.68
GCDH-214ENST00000591043 KDM3BQ7LBC6 1761 aa25.56■■□□□ 1.68
GCDH-214ENST00000591043 AKAP4Q5JQC9 854 aa25.55■■□□□ 1.68
GCDH-214ENST00000591043 RPAP2Q8IXW5 612 aaPredicted RBP25.55■■□□□ 1.68
GCDH-214ENST00000591043 DAXXQ9UER7 740 aaPredicted RBP25.55■■□□□ 1.68
GCDH-214ENST00000591043 NPHP3Q7Z494 1330 aa25.55■■□□□ 1.68
GCDH-214ENST00000591043 HOXB7P09629 217 aa25.54■■□□□ 1.68
GCDH-214ENST00000591043 MIS18AQ9NYP9 233 aa25.54■■□□□ 1.68
GCDH-214ENST00000591043 LMOD2Q6P5Q4 547 aa25.53■■□□□ 1.68
GCDH-214ENST00000591043 USHBP1Q8N6Y0 703 aa25.52■■□□□ 1.68
GCDH-214ENST00000591043 ANKRD24Q8TF21 1146 aa25.52■■□□□ 1.68
GCDH-214ENST00000591043 XPCQ01831 940 aaPredicted RBP25.51■■□□□ 1.67
GCDH-214ENST00000591043 PXDNLA1KZ92 1463 aa25.51■■□□□ 1.67
GCDH-214ENST00000591043 ZBTB7CA1YPR0 619 aa25.5■■□□□ 1.67
GCDH-214ENST00000591043 ANKRD44Q8N8A2 993 aa25.49■■□□□ 1.67
GCDH-214ENST00000591043 TNS3Q68CZ2 1445 aa25.49■■□□□ 1.67
GCDH-214ENST00000591043 RGPD5Q99666 1765 aa25.49■■□□□ 1.67
GCDH-214ENST00000591043 EIF5BO60841 1220 aaKnown RBP25.49■■□□□ 1.67
GCDH-214ENST00000591043 UBAP1LF5GYI3 381 aa25.48■■□□□ 1.67
GCDH-214ENST00000591043 C1orf141Q5JVX7 400 aa25.48■■□□□ 1.67
GCDH-214ENST00000591043 ZNF530Q6P9A1 599 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms