RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 KIF20BQ96Q89 1820 aa30.32■■■□□ 2.44
DDX39A-215ENST00000590696 USHBP1Q8N6Y0 703 aa30.32■■■□□ 2.44
DDX39A-215ENST00000590696 SMG6Q86US8 1419 aaKnown RBP30.31■■■□□ 2.44
DDX39A-215ENST00000590696 SHANK3Q9BYB0 1731 aa30.31■■■□□ 2.44
DDX39A-215ENST00000590696 SLC27A3Q5K4L6 730 aa30.31■■■□□ 2.44
DDX39A-215ENST00000590696 SGIP1Q9BQI5 828 aa30.3■■■□□ 2.44
DDX39A-215ENST00000590696 CARD14Q9BXL6 1004 aa30.3■■■□□ 2.44
DDX39A-215ENST00000590696 DOT1LQ8TEK3 1739 aa30.3■■■□□ 2.44
DDX39A-215ENST00000590696 HSP90AB2PQ58FF8 381 aa30.29■■■□□ 2.44
DDX39A-215ENST00000590696 RAPGEF4Q8WZA2 1011 aa30.28■■■□□ 2.44
DDX39A-215ENST00000590696 AKT1S1Q96B36 256 aa30.28■■■□□ 2.44
DDX39A-215ENST00000590696 FHDC1Q9C0D6 1143 aaPredicted RBP30.28■■■□□ 2.44
DDX39A-215ENST00000590696 INSRP06213 1382 aa30.28■■■□□ 2.44
DDX39A-215ENST00000590696 CGNL1Q0VF96 1302 aa30.27■■■□□ 2.44
DDX39A-215ENST00000590696 PCGF6Q9BYE7 350 aa30.26■■■□□ 2.43
DDX39A-215ENST00000590696 NSD2O96028 1365 aa30.26■■■□□ 2.43
DDX39A-215ENST00000590696 FLT4P35916 1363 aa30.26■■■□□ 2.43
DDX39A-215ENST00000590696 NSD3Q9BZ95 1437 aa30.25■■■□□ 2.43
DDX39A-215ENST00000590696 TATP17735 454 aaPredicted RBP30.25■■■□□ 2.43
DDX39A-215ENST00000590696 KCNQ4P56696 695 aa30.25■■■□□ 2.43
DDX39A-215ENST00000590696 SYT17Q9BSW7 474 aa30.25■■■□□ 2.43
DDX39A-215ENST00000590696 KIF24Q5T7B8 1368 aa30.24■■■□□ 2.43
DDX39A-215ENST00000590696 CLSPNQ9HAW4 1339 aa30.22■■■□□ 2.43
DDX39A-215ENST00000590696 ARXQ96QS3 562 aa30.22■■■□□ 2.43
DDX39A-215ENST00000590696 EMILIN1Q9Y6C2 1016 aa30.22■■■□□ 2.43
DDX39A-215ENST00000590696 LY75O60449 1722 aa30.21■■■□□ 2.43
DDX39A-215ENST00000590696 SLC16A10Q8TF71 515 aa30.19■■■□□ 2.42
DDX39A-215ENST00000590696 TFCP2L1Q9NZI6 479 aa30.19■■■□□ 2.42
DDX39A-215ENST00000590696 PNPLA7Q6ZV29 1317 aa30.19■■■□□ 2.42
DDX39A-215ENST00000590696 QSER1Q2KHR3 1735 aa30.18■■■□□ 2.42
DDX39A-215ENST00000590696 CCNL1Q9UK58 526 aaPredicted RBP30.17■■■□□ 2.42
DDX39A-215ENST00000590696 PCDH11XQ9BZA7 1347 aa30.17■■■□□ 2.42
DDX39A-215ENST00000590696 PCDH11YQ9BZA8 1340 aa30.17■■■□□ 2.42
DDX39A-215ENST00000590696 PPM1GO15355 546 aaPredicted RBP30.16■■■□□ 2.42
DDX39A-215ENST00000590696 POLR3GLQ9BT43 218 aa30.14■■■□□ 2.42
DDX39A-215ENST00000590696 TUBGCP6Q96RT7 1819 aa30.13■■■□□ 2.41
DDX39A-215ENST00000590696 CYP27B1O15528 508 aa30.11■■■□□ 2.41
DDX39A-215ENST00000590696 POLD1P28340 1107 aa30.11■■■□□ 2.41
DDX39A-215ENST00000590696 MAP3K5Q99683 1374 aa30.11■■■□□ 2.41
DDX39A-215ENST00000590696 WASHC2AQ641Q2 1341 aa30.1■■■□□ 2.41
DDX39A-215ENST00000590696 MPRIPQ6WCQ1 1025 aa30.08■■■□□ 2.41
DDX39A-215ENST00000590696 MAP2P11137 1827 aaKnown RBP30.08■■■□□ 2.41
DDX39A-215ENST00000590696 ANKRD26Q9UPS8 1709 aa30.08■■■□□ 2.41
DDX39A-215ENST00000590696 COL24A1Q17RW2 1714 aa30.07■■■□□ 2.4
DDX39A-215ENST00000590696 NCAPD2Q15021 1401 aa30.06■■■□□ 2.4
DDX39A-215ENST00000590696 KLHL34Q8N239 644 aa30.06■■■□□ 2.4
DDX39A-215ENST00000590696 POLKQ9UBT6 870 aa30.06■■■□□ 2.4
DDX39A-215ENST00000590696 PKD1L3Q7Z443 1732 aa30.05■■■□□ 2.4
DDX39A-215ENST00000590696 MSH5O43196 834 aa30.05■■■□□ 2.4
DDX39A-215ENST00000590696 EYA1Q99502 592 aa30.05■■■□□ 2.4
DDX39A-215ENST00000590696 PALLDQ8WX93 1383 aa30.04■■■□□ 2.4
DDX39A-215ENST00000590696 EIF4G2P78344 907 aaKnown RBP eCLIP30.04■■■□□ 2.4
DDX39A-215ENST00000590696 COL23A1Q86Y22 540 aaPredicted RBP30.04■■■□□ 2.4
DDX39A-215ENST00000590696 SPG7Q9UQ90 795 aa30.04■■■□□ 2.4
DDX39A-215ENST00000590696 TOGARAM1Q9Y4F4 1720 aa30.02■■■□□ 2.4
DDX39A-215ENST00000590696 HSPA5P11021 654 aaKnown RBP30.02■■■□□ 2.4
DDX39A-215ENST00000590696 TNNT2P45379 298 aaPredicted RBP30.02■■■□□ 2.4
DDX39A-215ENST00000590696 C5P01031 1676 aa30.01■■■□□ 2.4
DDX39A-215ENST00000590696 ITGB4P16144 1822 aa30.01■■■□□ 2.39
DDX39A-215ENST00000590696 UTRNP46939 3433 aa30■■■□□ 2.39
DDX39A-215ENST00000590696 NKX1-1Q15270 411 aaPredicted RBP30■■■□□ 2.39
DDX39A-215ENST00000590696 HMGB2P26583 209 aaKnown RBP29.99■■■□□ 2.39
DDX39A-215ENST00000590696 GPR162Q16538 588 aa29.99■■■□□ 2.39
DDX39A-215ENST00000590696 SMARCC1Q92922 1105 aaPredicted RBP29.99■■■□□ 2.39
DDX39A-215ENST00000590696 PIGBQ92521 554 aa29.98■■■□□ 2.39
DDX39A-215ENST00000590696 PANK3Q9H999 370 aa29.97■■■□□ 2.39
DDX39A-215ENST00000590696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.97■■■□□ 2.39
DDX39A-215ENST00000590696 TAF1LQ8IZX4 1826 aa29.96■■■□□ 2.39
DDX39A-215ENST00000590696 EIF4A2Q14240 407 aaKnown RBP29.96■■■□□ 2.39
DDX39A-215ENST00000590696 CCER1Q8TC90 406 aaPredicted RBP29.96■■■□□ 2.39
DDX39A-215ENST00000590696 MSL1Q68DK7 614 aa29.95■■■□□ 2.39
DDX39A-215ENST00000590696 ZNF784Q8NCA9 323 aaPredicted RBP29.95■■■□□ 2.39
DDX39A-215ENST00000590696 FLAD1Q8NFF5 587 aa29.94■■■□□ 2.38
DDX39A-215ENST00000590696 NLGN2Q8NFZ4 835 aa29.94■■■□□ 2.38
DDX39A-215ENST00000590696 CHD4Q14839 1912 aa29.94■■■□□ 2.38
DDX39A-215ENST00000590696 IFNL2Q8IZJ0 200 aa29.93■■■□□ 2.38
DDX39A-215ENST00000590696 PHKG2P15735 406 aa29.92■■■□□ 2.38
DDX39A-215ENST00000590696 PELP1Q8IZL8 1130 aaKnown RBP29.92■■■□□ 2.38
DDX39A-215ENST00000590696 AK7Q96M32 723 aa29.91■■■□□ 2.38
DDX39A-215ENST00000590696 TMOD3Q9NYL9 352 aa29.91■■■□□ 2.38
DDX39A-215ENST00000590696 C4BP0C0L5 1744 aa29.91■■■□□ 2.38
DDX39A-215ENST00000590696 LOC102724428A0A0B4J2F2 783 aa29.87■■■□□ 2.37
DDX39A-215ENST00000590696 SIK1P57059 783 aa29.87■■■□□ 2.37
DDX39A-215ENST00000590696 AMIGO3Q86WK7 504 aa29.86■■■□□ 2.37
DDX39A-215ENST00000590696 ASAP1Q9ULH1 1129 aa29.86■■■□□ 2.37
DDX39A-215ENST00000590696 IGSF1Q8N6C5 1336 aa29.86■■■□□ 2.37
DDX39A-215ENST00000590696 PHF14O94880 888 aa29.84■■■□□ 2.37
DDX39A-215ENST00000590696 SMIM5Q71RC9 77 aa29.84■■■□□ 2.37
DDX39A-215ENST00000590696 LINC00116Q8NCU8 138 aa29.84■■■□□ 2.37
DDX39A-215ENST00000590696 PLEKHG2Q9H7P9 1386 aa29.83■■■□□ 2.37
DDX39A-215ENST00000590696 MORC1Q86VD1 984 aa29.83■■■□□ 2.37
DDX39A-215ENST00000590696 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.82■■■□□ 2.36
DDX39A-215ENST00000590696 UBR3Q6ZT12 1888 aa29.82■■■□□ 2.36
DDX39A-215ENST00000590696 ATP6V1AP38606 617 aa29.81■■■□□ 2.36
DDX39A-215ENST00000590696 ATG3Q9NT62 314 aa29.81■■■□□ 2.36
DDX39A-215ENST00000590696 ITPK1Q13572 414 aa29.8■■■□□ 2.36
DDX39A-215ENST00000590696 YBX3P16989 372 aaKnown RBP eCLIP29.79■■■□□ 2.36
DDX39A-215ENST00000590696 SSFA2P28290 1259 aa29.79■■■□□ 2.36
DDX39A-215ENST00000590696 PLEKHO1Q53GL0 409 aaPredicted RBP29.79■■■□□ 2.36
DDX39A-215ENST00000590696 CD2APQ9Y5K6 639 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms