RNA–Protein interactions for RNA: ENST00000590194.5

SLC25A39-212, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SLC25A39, Length 1,542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-212ENST00000590194 LRRC37A3O60309 1634 aa27.58■■■□□ 2.01
SLC25A39-212ENST00000590194 U2AF1L5P0DN76 240 aaPredicted RBP27.58■■■□□ 2.01
SLC25A39-212ENST00000590194 U2AF1Q01081 240 aaKnown RBP eCLIP27.58■■■□□ 2.01
SLC25A39-212ENST00000590194 OVOS2A0A0G2JMS6 1433 aa27.56■■■□□ 2
SLC25A39-212ENST00000590194 ZCRB1Q8TBF4 217 aaKnown RBP27.56■■■□□ 2
SLC25A39-212ENST00000590194 CCDC184Q52MB2 194 aa27.55■■■□□ 2
SLC25A39-212ENST00000590194 DDX54Q8TDD1 881 aaKnown RBP27.55■■■□□ 2
SLC25A39-212ENST00000590194 TNS2Q63HR2 1409 aa27.54■■■□□ 2
SLC25A39-212ENST00000590194 KDRP35968 1356 aa27.54■■■□□ 2
SLC25A39-212ENST00000590194 UPF1Q92900 1129 aaKnown RBP eCLIP27.53■■■□□ 22e-6■■■■■ 32.2
SLC25A39-212ENST00000590194 MARCH10Q8NA82 808 aaPredicted RBP27.52■■■□□ 2
SLC25A39-212ENST00000590194 MRS2Q9HD23 443 aa27.49■■□□□ 1.99
SLC25A39-212ENST00000590194 SPG7Q9UQ90 795 aa27.49■■□□□ 1.99
SLC25A39-212ENST00000590194 EP400Q96L91 3159 aa27.49■■□□□ 1.99
SLC25A39-212ENST00000590194 PRKAR2BP31323 418 aa27.47■■□□□ 1.99
SLC25A39-212ENST00000590194 WDR43Q15061 677 aaKnown RBP eCLIP27.47■■□□□ 1.99
SLC25A39-212ENST00000590194 PLEKHO1Q53GL0 409 aaPredicted RBP27.47■■□□□ 1.99
SLC25A39-212ENST00000590194 RSPH6AQ9H0K4 717 aa27.47■■□□□ 1.99
SLC25A39-212ENST00000590194 PCDH11XQ9BZA7 1347 aa27.46■■□□□ 1.99
SLC25A39-212ENST00000590194 PCDH11YQ9BZA8 1340 aa27.46■■□□□ 1.99
SLC25A39-212ENST00000590194 FCHSD2O94868 740 aa27.45■■□□□ 1.98
SLC25A39-212ENST00000590194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.45■■□□□ 1.98
SLC25A39-212ENST00000590194 PKD1L3Q7Z443 1732 aa27.44■■□□□ 1.98
SLC25A39-212ENST00000590194 SHANK3Q9BYB0 1731 aa27.44■■□□□ 1.98
SLC25A39-212ENST00000590194 CYP27B1O15528 508 aa27.44■■□□□ 1.98
SLC25A39-212ENST00000590194 AMOTQ4VCS5 1084 aa27.44■■□□□ 1.98
SLC25A39-212ENST00000590194 FAM196AQ6ZSG2 479 aa27.43■■□□□ 1.98
SLC25A39-212ENST00000590194 ZNF530Q6P9A1 599 aaPredicted RBP27.42■■□□□ 1.98
SLC25A39-212ENST00000590194 PHACTR3Q96KR7 559 aa27.41■■□□□ 1.98
SLC25A39-212ENST00000590194 ADAMTS8Q9UP79 889 aa27.41■■□□□ 1.98
SLC25A39-212ENST00000590194 MTHFSDQ2M296 383 aaKnown RBP27.4■■□□□ 1.98
SLC25A39-212ENST00000590194 IFNL2Q8IZJ0 200 aa27.4■■□□□ 1.98
SLC25A39-212ENST00000590194 MIER1Q8N108 512 aa27.4■■□□□ 1.98
SLC25A39-212ENST00000590194 PLEKHG2Q9H7P9 1386 aa27.4■■□□□ 1.98
SLC25A39-212ENST00000590194 PHKG2P15735 406 aa27.39■■□□□ 1.98
SLC25A39-212ENST00000590194 ACSBG1Q96GR2 724 aa27.38■■□□□ 1.97
SLC25A39-212ENST00000590194 C1orf141Q5JVX7 400 aa27.37■■□□□ 1.97
SLC25A39-212ENST00000590194 TRIM37O94972 964 aa27.36■■□□□ 1.97
SLC25A39-212ENST00000590194 NEFMP07197 916 aa27.36■■□□□ 1.97
SLC25A39-212ENST00000590194 CCDC146Q8IYE0 955 aa27.36■■□□□ 1.97
SLC25A39-212ENST00000590194 PLEKHF1Q96S99 279 aa27.36■■□□□ 1.97
SLC25A39-212ENST00000590194 PNNQ9H307 717 aaKnown RBP27.36■■□□□ 1.97
SLC25A39-212ENST00000590194 PNISRQ8TF01 805 aaKnown RBP27.36■■□□□ 1.97
SLC25A39-212ENST00000590194 MAPK8IP3Q9UPT6 1336 aa27.34■■□□□ 1.97
SLC25A39-212ENST00000590194 GAS2L2Q8NHY3 880 aa27.33■■□□□ 1.97
SLC25A39-212ENST00000590194 KCNQ2O43526 872 aa27.32■■□□□ 1.96
SLC25A39-212ENST00000590194 AKAP4Q5JQC9 854 aa27.32■■□□□ 1.96
SLC25A39-212ENST00000590194 SYTL4Q96C24 671 aaPredicted RBP27.32■■□□□ 1.96
SLC25A39-212ENST00000590194 BCL9O00512 1426 aa27.32■■□□□ 1.96
SLC25A39-212ENST00000590194 NKX1-1Q15270 411 aaPredicted RBP27.31■■□□□ 1.96
SLC25A39-212ENST00000590194 MPRIPQ6WCQ1 1025 aa27.31■■□□□ 1.96
SLC25A39-212ENST00000590194 PTF1AQ7RTS3 328 aa27.31■■□□□ 1.96
SLC25A39-212ENST00000590194 CCER2I3L3R5 266 aa27.31■■□□□ 1.96
SLC25A39-212ENST00000590194 FAM9BQ8IZU0 186 aa27.31■■□□□ 1.96
SLC25A39-212ENST00000590194 HSP90AB1P08238 724 aaKnown RBP27.3■■□□□ 1.96
SLC25A39-212ENST00000590194 PRIM1P49642 420 aaKnown RBP27.3■■□□□ 1.96
SLC25A39-212ENST00000590194 KAT6BQ8WYB5 2073 aa27.29■■□□□ 1.96
SLC25A39-212ENST00000590194 RUNDC1Q96C34 613 aa27.29■■□□□ 1.96
SLC25A39-212ENST00000590194 SBF2Q86WG5 1849 aa27.28■■□□□ 1.96
SLC25A39-212ENST00000590194 DOT1LQ8TEK3 1739 aa27.28■■□□□ 1.96
SLC25A39-212ENST00000590194 DCAF5Q96JK2 942 aa27.28■■□□□ 1.96
SLC25A39-212ENST00000590194 SF3B2Q13435 895 aaKnown RBP27.27■■□□□ 1.96
SLC25A39-212ENST00000590194 GNAT3A8MTJ3 354 aa27.26■■□□□ 1.96
SLC25A39-212ENST00000590194 BCL11BQ9C0K0 894 aaPredicted RBP27.26■■□□□ 1.96
SLC25A39-212ENST00000590194 MAP3K5Q99683 1374 aa27.26■■□□□ 1.95
SLC25A39-212ENST00000590194 LGR6Q9HBX8 967 aa27.26■■□□□ 1.95
SLC25A39-212ENST00000590194 KDM6AO15550 1401 aaPredicted RBP27.25■■□□□ 1.95
SLC25A39-212ENST00000590194 NFE2L2Q16236 605 aa27.25■■□□□ 1.95
SLC25A39-212ENST00000590194 TOGARAM1Q9Y4F4 1720 aa27.25■■□□□ 1.95
SLC25A39-212ENST00000590194 APBA3O96018 575 aa27.24■■□□□ 1.95
SLC25A39-212ENST00000590194 CCDC125Q86Z20 511 aa27.24■■□□□ 1.95
SLC25A39-212ENST00000590194 NHSQ6T4R5 1651 aa27.23■■□□□ 1.95
SLC25A39-212ENST00000590194 NEUROD2Q15784 382 aa27.23■■□□□ 1.95
SLC25A39-212ENST00000590194 RRP7AQ9Y3A4 280 aaKnown RBP27.23■■□□□ 1.95
SLC25A39-212ENST00000590194 RNMTO43148 476 aaKnown RBP27.22■■□□□ 1.95
SLC25A39-212ENST00000590194 SENP3-EIF4A1A0A087X0R7 540 aa27.21■■□□□ 1.95
SLC25A39-212ENST00000590194 RTF1Q92541 710 aaKnown RBP27.21■■□□□ 1.95
SLC25A39-212ENST00000590194 TMPOP42166 694 aaKnown RBP27.21■■□□□ 1.95
SLC25A39-212ENST00000590194 ERVV-2B6SEH9 535 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 RIPK4P57078 832 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 CABP4P57796 275 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 DCTN1Q14203 1278 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 MCM10Q7L590 875 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 DEFB132Q7Z7B7 95 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 IL17REQ8NFR9 667 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 TMOD3Q9NYL9 352 aa27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 TNS1Q9HBL0 1735 aaKnown RBP27.2■■□□□ 1.94
SLC25A39-212ENST00000590194 APAF1O14727 1248 aa27.19■■□□□ 1.94
SLC25A39-212ENST00000590194 PIGBQ92521 554 aa27.19■■□□□ 1.94
SLC25A39-212ENST00000590194 NFATC2IPQ8NCF5 419 aa27.18■■□□□ 1.94
SLC25A39-212ENST00000590194 ITGB4P16144 1822 aa27.17■■□□□ 1.94
SLC25A39-212ENST00000590194 BAG6P46379 1132 aa27.17■■□□□ 1.94
SLC25A39-212ENST00000590194 SCN11AQ9UI33 1791 aa27.17■■□□□ 1.94
SLC25A39-212ENST00000590194 EN1Q05925 392 aaPredicted RBP27.16■■□□□ 1.94
SLC25A39-212ENST00000590194 DLG5Q8TDM6 1919 aa27.16■■□□□ 1.94
SLC25A39-212ENST00000590194 BTAF1O14981 1849 aa27.15■■□□□ 1.94
SLC25A39-212ENST00000590194 HTATSF1O43719 755 aaKnown RBP27.15■■□□□ 1.94
SLC25A39-212ENST00000590194 SLC52A2Q9HAB3 445 aa27.15■■□□□ 1.94
SLC25A39-212ENST00000590194 TEFQ10587 303 aa27.14■■□□□ 1.94
SLC25A39-212ENST00000590194 VIRMAQ69YN4 1812 aaKnown RBP27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms