RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 QSER1Q2KHR3 1735 aa16.15■□□□□ 0.18
TOMM40-204ENST00000589253 CDCA8Q53HL2 280 aa16.15■□□□□ 0.18
TOMM40-204ENST00000589253 NME9Q86XW9 330 aa16.15■□□□□ 0.18
TOMM40-204ENST00000589253 DDX54Q8TDD1 881 aaKnown RBP16.15■□□□□ 0.18
TOMM40-204ENST00000589253 LRRC4BQ9NT99 713 aa16.15■□□□□ 0.18
TOMM40-204ENST00000589253 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
TOMM40-204ENST00000589253 SYTL4Q96C24 671 aaPredicted RBP16.14■□□□□ 0.17
TOMM40-204ENST00000589253 WASHC2AQ641Q2 1341 aa16.14■□□□□ 0.17
TOMM40-204ENST00000589253 KAT6BQ8WYB5 2073 aa16.14■□□□□ 0.17
TOMM40-204ENST00000589253 ANKRD26Q9UPS8 1709 aa16.14■□□□□ 0.17
TOMM40-204ENST00000589253 POLR3GLQ9BT43 218 aa16.13■□□□□ 0.17
TOMM40-204ENST00000589253 FAM208AQ9UK61 1670 aaKnown RBP16.13■□□□□ 0.17
TOMM40-204ENST00000589253 EDC4Q6P2E9 1401 aaKnown RBP16.12■□□□□ 0.17
TOMM40-204ENST00000589253 TERF2IPQ9NYB0 399 aa16.12■□□□□ 0.17
TOMM40-204ENST00000589253 MSH5O43196 834 aa16.11■□□□□ 0.17
TOMM40-204ENST00000589253 PNPLA7Q6ZV29 1317 aa16.11■□□□□ 0.17
TOMM40-204ENST00000589253 GRIN3BO60391 1043 aa16.1■□□□□ 0.17
TOMM40-204ENST00000589253 LTV1Q96GA3 475 aaPredicted RBP16.1■□□□□ 0.17
TOMM40-204ENST00000589253 IP6K1Q92551 441 aa16.09■□□□□ 0.17
TOMM40-204ENST00000589253 PRIM1P49642 420 aaKnown RBP16.08■□□□□ 0.16
TOMM40-204ENST00000589253 CARD14Q9BXL6 1004 aa16.08■□□□□ 0.16
TOMM40-204ENST00000589253 NSD3Q9BZ95 1437 aa16.08■□□□□ 0.16
TOMM40-204ENST00000589253 COL24A1Q17RW2 1714 aa16.08■□□□□ 0.16
TOMM40-204ENST00000589253 DOT1LQ8TEK3 1739 aa16.08■□□□□ 0.16
TOMM40-204ENST00000589253 HMGB2P26583 209 aaKnown RBP16.07■□□□□ 0.16
TOMM40-204ENST00000589253 NLGN2Q8NFZ4 835 aa16.07■□□□□ 0.16
TOMM40-204ENST00000589253 CCNL1Q9UK58 526 aaPredicted RBP16.07■□□□□ 0.16
TOMM40-204ENST00000589253 GOLGB1Q14789 3259 aaKnown RBP16.06■□□□□ 0.16
TOMM40-204ENST00000589253 TUBGCP6Q96RT7 1819 aa16.06■□□□□ 0.16
TOMM40-204ENST00000589253 KCNQ4P56696 695 aa16.06■□□□□ 0.16
TOMM40-204ENST00000589253 IFFO2Q5TF58 517 aa16.06■□□□□ 0.16
TOMM40-204ENST00000589253 LY75O60449 1722 aa16.05■□□□□ 0.16
TOMM40-204ENST00000589253 SHANK3Q9BYB0 1731 aa16.05■□□□□ 0.16
TOMM40-204ENST00000589253 AMPHP49418 695 aa16.05■□□□□ 0.16
TOMM40-204ENST00000589253 ZCRB1Q8TBF4 217 aaKnown RBP16.05■□□□□ 0.16
TOMM40-204ENST00000589253 COG3Q96JB2 828 aa16.05■□□□□ 0.16
TOMM40-204ENST00000589253 MAP2P11137 1827 aaKnown RBP16.05■□□□□ 0.16
TOMM40-204ENST00000589253 PANK3Q9H999 370 aa16.04■□□□□ 0.16
TOMM40-204ENST00000589253 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.16
TOMM40-204ENST00000589253 HOXC9P31274 260 aa16.02■□□□□ 0.16
TOMM40-204ENST00000589253 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.15
TOMM40-204ENST00000589253 NSD2O96028 1365 aa16.01■□□□□ 0.15
TOMM40-204ENST00000589253 CGNL1Q0VF96 1302 aa16■□□□□ 0.15
TOMM40-204ENST00000589253 MAP3K19Q56UN5 1328 aa16■□□□□ 0.15
TOMM40-204ENST00000589253 MSL1Q68DK7 614 aa16■□□□□ 0.15
TOMM40-204ENST00000589253 COL23A1Q86Y22 540 aaPredicted RBP16■□□□□ 0.15
TOMM40-204ENST00000589253 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
TOMM40-204ENST00000589253 GPBP1L1Q9HC44 474 aaPredicted RBP16■□□□□ 0.15
TOMM40-204ENST00000589253 ATP10DQ9P241 1426 aa16■□□□□ 0.15
TOMM40-204ENST00000589253 MEGF6O75095 1541 aa15.99■□□□□ 0.15
TOMM40-204ENST00000589253 FYB1O15117 783 aa15.99■□□□□ 0.15
TOMM40-204ENST00000589253 RAPGEF4Q8WZA2 1011 aa15.99■□□□□ 0.15
TOMM40-204ENST00000589253 CD2APQ9Y5K6 639 aa15.99■□□□□ 0.15
TOMM40-204ENST00000589253 RTL1A6NKG5 1358 aa15.99■□□□□ 0.15
TOMM40-204ENST00000589253 PER1O15534 1290 aaPredicted RBP15.98■□□□□ 0.15
TOMM40-204ENST00000589253 C5P01031 1676 aa15.98■□□□□ 0.15
TOMM40-204ENST00000589253 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
TOMM40-204ENST00000589253 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
TOMM40-204ENST00000589253 RGPD2P0DJD1 1756 aa15.96■□□□□ 0.15
TOMM40-204ENST00000589253 TATP17735 454 aaPredicted RBP15.96■□□□□ 0.15
TOMM40-204ENST00000589253 PCDH11XQ9BZA7 1347 aa15.95■□□□□ 0.14
TOMM40-204ENST00000589253 PCDH11YQ9BZA8 1340 aa15.95■□□□□ 0.14
TOMM40-204ENST00000589253 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
TOMM40-204ENST00000589253 AK7Q96M32 723 aa15.95■□□□□ 0.14
TOMM40-204ENST00000589253 ZNF526Q8TF50 670 aaPredicted RBP15.94■□□□□ 0.14
TOMM40-204ENST00000589253 PALLDQ8WX93 1383 aa15.94■□□□□ 0.14
TOMM40-204ENST00000589253 FBLN1P23142 703 aa15.93■□□□□ 0.14
TOMM40-204ENST00000589253 NBPF6Q5VWK0 638 aa15.93■□□□□ 0.14
TOMM40-204ENST00000589253 USHBP1Q8N6Y0 703 aa15.93■□□□□ 0.14
TOMM40-204ENST00000589253 NBPF4Q96M43 638 aa15.93■□□□□ 0.14
TOMM40-204ENST00000589253 ZNF316A6NFI3 1004 aaPredicted RBP15.92■□□□□ 0.14
TOMM40-204ENST00000589253 HSPA6P17066 643 aa15.92■□□□□ 0.14
TOMM40-204ENST00000589253 RRS1Q15050 365 aaKnown RBP15.92■□□□□ 0.14
TOMM40-204ENST00000589253 MPRIPQ6WCQ1 1025 aa15.92■□□□□ 0.14
TOMM40-204ENST00000589253 SMARCC1Q92922 1105 aaPredicted RBP15.92■□□□□ 0.14
TOMM40-204ENST00000589253 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
TOMM40-204ENST00000589253 C4BP0C0L5 1744 aa15.91■□□□□ 0.14
TOMM40-204ENST00000589253 NPC1L1Q9UHC9 1359 aa15.9■□□□□ 0.14
TOMM40-204ENST00000589253 TAF1LQ8IZX4 1826 aa15.9■□□□□ 0.14
TOMM40-204ENST00000589253 PHF14O94880 888 aa15.9■□□□□ 0.14
TOMM40-204ENST00000589253 IGSF1Q8N6C5 1336 aa15.9■□□□□ 0.14
TOMM40-204ENST00000589253 ADCY9O60503 1353 aa15.89■□□□□ 0.13
TOMM40-204ENST00000589253 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
TOMM40-204ENST00000589253 INSRP06213 1382 aa15.87■□□□□ 0.13
TOMM40-204ENST00000589253 FLT4P35916 1363 aa15.87■□□□□ 0.13
TOMM40-204ENST00000589253 KIF24Q5T7B8 1368 aa15.87■□□□□ 0.13
TOMM40-204ENST00000589253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
TOMM40-204ENST00000589253 SSFA2P28290 1259 aa15.86■□□□□ 0.13
TOMM40-204ENST00000589253 CC2D1BQ5T0F9 858 aaKnown RBP15.86■□□□□ 0.13
TOMM40-204ENST00000589253 WWC3Q9ULE0 1092 aa15.86■□□□□ 0.13
TOMM40-204ENST00000589253 HSP90AB2PQ58FF8 381 aa15.85■□□□□ 0.13
TOMM40-204ENST00000589253 SPG7Q9UQ90 795 aa15.84■□□□□ 0.13
TOMM40-204ENST00000589253 EMILIN1Q9Y6C2 1016 aa15.84■□□□□ 0.13
TOMM40-204ENST00000589253 ITGB4P16144 1822 aa15.84■□□□□ 0.13
TOMM40-204ENST00000589253 UBR3Q6ZT12 1888 aa15.84■□□□□ 0.13
TOMM40-204ENST00000589253 TOGARAM1Q9Y4F4 1720 aa15.83■□□□□ 0.13
TOMM40-204ENST00000589253 CYP27B1O15528 508 aa15.83■□□□□ 0.12
TOMM40-204ENST00000589253 TNNT2P45379 298 aaPredicted RBP15.83■□□□□ 0.12
TOMM40-204ENST00000589253 LOC102724428A0A0B4J2F2 783 aa15.82■□□□□ 0.12
TOMM40-204ENST00000589253 SIK1P57059 783 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms