RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TATP17735 454 aaPredicted RBP25.41■■□□□ 1.66
CLPTM1-209ENST00000588855 DDB1Q16531 1140 aa25.41■■□□□ 1.66
CLPTM1-209ENST00000588855 CCDC184Q52MB2 194 aa25.4■■□□□ 1.66
CLPTM1-209ENST00000588855 U2AF1L5P0DN76 240 aaPredicted RBP25.37■■□□□ 1.65
CLPTM1-209ENST00000588855 U2AF1Q01081 240 aaKnown RBP eCLIP25.37■■□□□ 1.65
CLPTM1-209ENST00000588855 KRT27Q7Z3Y8 459 aa25.37■■□□□ 1.65
CLPTM1-209ENST00000588855 EXOC5O00471 708 aa25.37■■□□□ 1.65
CLPTM1-209ENST00000588855 PDE3BQ13370 1112 aa25.35■■□□□ 1.65
CLPTM1-209ENST00000588855 FAM182BQ5T319 152 aa25.34■■□□□ 1.65
CLPTM1-209ENST00000588855 ZCRB1Q8TBF4 217 aaKnown RBP25.34■■□□□ 1.65
CLPTM1-209ENST00000588855 RSPH6AQ9H0K4 717 aa25.34■■□□□ 1.65
CLPTM1-209ENST00000588855 PLEKHG2Q9H7P9 1386 aa25.34■■□□□ 1.65
CLPTM1-209ENST00000588855 MRS2Q9HD23 443 aa25.32■■□□□ 1.64
CLPTM1-209ENST00000588855 MARCH10Q8NA82 808 aaPredicted RBP25.32■■□□□ 1.64
CLPTM1-209ENST00000588855 PRKAR2BP31323 418 aa25.3■■□□□ 1.64
CLPTM1-209ENST00000588855 WDR43Q15061 677 aaKnown RBP eCLIP25.3■■□□□ 1.64
CLPTM1-209ENST00000588855 PCDH11XQ9BZA7 1347 aa25.29■■□□□ 1.64
CLPTM1-209ENST00000588855 PCDH11YQ9BZA8 1340 aa25.29■■□□□ 1.64
CLPTM1-209ENST00000588855 DDX54Q8TDD1 881 aaKnown RBP25.29■■□□□ 1.64
CLPTM1-209ENST00000588855 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.29■■□□□ 1.64
CLPTM1-209ENST00000588855 SPG7Q9UQ90 795 aa25.29■■□□□ 1.64
CLPTM1-209ENST00000588855 FCHSD2O94868 740 aa25.28■■□□□ 1.64
CLPTM1-209ENST00000588855 PLEKHO1Q53GL0 409 aaPredicted RBP25.27■■□□□ 1.64
CLPTM1-209ENST00000588855 SBF2Q86WG5 1849 aa25.27■■□□□ 1.64
CLPTM1-209ENST00000588855 CYP27B1O15528 508 aa25.27■■□□□ 1.64
CLPTM1-209ENST00000588855 MIER1Q8N108 512 aa25.27■■□□□ 1.64
CLPTM1-209ENST00000588855 AMOTQ4VCS5 1084 aa25.26■■□□□ 1.63
CLPTM1-209ENST00000588855 DOT1LQ8TEK3 1739 aa25.25■■□□□ 1.63
CLPTM1-209ENST00000588855 ADAMTS8Q9UP79 889 aa25.25■■□□□ 1.63
CLPTM1-209ENST00000588855 ZNF530Q6P9A1 599 aaPredicted RBP25.24■■□□□ 1.63
CLPTM1-209ENST00000588855 PHACTR3Q96KR7 559 aa25.24■■□□□ 1.63
CLPTM1-209ENST00000588855 MTHFSDQ2M296 383 aaKnown RBP25.23■■□□□ 1.63
CLPTM1-209ENST00000588855 TOGARAM1Q9Y4F4 1720 aa25.23■■□□□ 1.63
CLPTM1-209ENST00000588855 PNISRQ8TF01 805 aaKnown RBP25.22■■□□□ 1.63
CLPTM1-209ENST00000588855 PLEKHF1Q96S99 279 aa25.22■■□□□ 1.63
CLPTM1-209ENST00000588855 VIRMAQ69YN4 1812 aaKnown RBP25.22■■□□□ 1.63
CLPTM1-209ENST00000588855 BCL9O00512 1426 aa25.22■■□□□ 1.63
CLPTM1-209ENST00000588855 PHKG2P15735 406 aa25.22■■□□□ 1.63
CLPTM1-209ENST00000588855 FAM196AQ6ZSG2 479 aa25.22■■□□□ 1.63
CLPTM1-209ENST00000588855 KAT6BQ8WYB5 2073 aa25.21■■□□□ 1.63
CLPTM1-209ENST00000588855 CCER2I3L3R5 266 aa25.21■■□□□ 1.63
CLPTM1-209ENST00000588855 IFNL2Q8IZJ0 200 aa25.21■■□□□ 1.63
CLPTM1-209ENST00000588855 NHSQ6T4R5 1651 aa25.2■■□□□ 1.62
CLPTM1-209ENST00000588855 CCDC146Q8IYE0 955 aa25.19■■□□□ 1.62
CLPTM1-209ENST00000588855 DLG5Q8TDM6 1919 aa25.19■■□□□ 1.62
CLPTM1-209ENST00000588855 C1orf141Q5JVX7 400 aa25.18■■□□□ 1.62
CLPTM1-209ENST00000588855 PNNQ9H307 717 aaKnown RBP25.18■■□□□ 1.62
CLPTM1-209ENST00000588855 TNS1Q9HBL0 1735 aaKnown RBP25.18■■□□□ 1.62
CLPTM1-209ENST00000588855 GAS2L2Q8NHY3 880 aa25.17■■□□□ 1.62
CLPTM1-209ENST00000588855 MAPK8IP3Q9UPT6 1336 aa25.17■■□□□ 1.62
CLPTM1-209ENST00000588855 SCN11AQ9UI33 1791 aa25.17■■□□□ 1.62
CLPTM1-209ENST00000588855 NKX1-1Q15270 411 aaPredicted RBP25.17■■□□□ 1.62
CLPTM1-209ENST00000588855 KDM6AO15550 1401 aaPredicted RBP25.16■■□□□ 1.62
CLPTM1-209ENST00000588855 ITGB4P16144 1822 aa25.16■■□□□ 1.62
CLPTM1-209ENST00000588855 NEFMP07197 916 aa25.16■■□□□ 1.62
CLPTM1-209ENST00000588855 AKAP4Q5JQC9 854 aa25.16■■□□□ 1.62
CLPTM1-209ENST00000588855 ACSBG1Q96GR2 724 aa25.16■■□□□ 1.62
CLPTM1-209ENST00000588855 ADAMTS7Q9UKP4 1686 aa25.15■■□□□ 1.62
CLPTM1-209ENST00000588855 MAP3K5Q99683 1374 aa25.13■■□□□ 1.61
CLPTM1-209ENST00000588855 TRIM37O94972 964 aa25.13■■□□□ 1.61
CLPTM1-209ENST00000588855 FAM9BQ8IZU0 186 aa25.13■■□□□ 1.61
CLPTM1-209ENST00000588855 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
CLPTM1-209ENST00000588855 KCNQ2O43526 872 aa25.12■■□□□ 1.61
CLPTM1-209ENST00000588855 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
CLPTM1-209ENST00000588855 PTF1AQ7RTS3 328 aa25.12■■□□□ 1.61
CLPTM1-209ENST00000588855 BTAF1O14981 1849 aa25.12■■□□□ 1.61
CLPTM1-209ENST00000588855 MPRIPQ6WCQ1 1025 aa25.12■■□□□ 1.61
CLPTM1-209ENST00000588855 NFE2L2Q16236 605 aa25.11■■□□□ 1.61
CLPTM1-209ENST00000588855 DCAF5Q96JK2 942 aa25.11■■□□□ 1.61
CLPTM1-209ENST00000588855 GNAT3A8MTJ3 354 aa25.1■■□□□ 1.61
CLPTM1-209ENST00000588855 UPF1Q92900 1129 aaKnown RBP eCLIP25.1■■□□□ 1.61
CLPTM1-209ENST00000588855 PRIM1P49642 420 aaKnown RBP25.09■■□□□ 1.61
CLPTM1-209ENST00000588855 SYTL4Q96C24 671 aaPredicted RBP25.09■■□□□ 1.61
CLPTM1-209ENST00000588855 BCL11BQ9C0K0 894 aaPredicted RBP25.07■■□□□ 1.6
CLPTM1-209ENST00000588855 LGR6Q9HBX8 967 aa25.07■■□□□ 1.6
CLPTM1-209ENST00000588855 RNMTO43148 476 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-209ENST00000588855 TMPOP42166 694 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-209ENST00000588855 RRP7AQ9Y3A4 280 aaKnown RBP25.07■■□□□ 1.6
CLPTM1-209ENST00000588855 MRC1P22897 1456 aa25.06■■□□□ 1.6
CLPTM1-209ENST00000588855 SIPA1L3O60292 1781 aaPredicted RBP25.05■■□□□ 1.6
CLPTM1-209ENST00000588855 ERVV-2B6SEH9 535 aa25.04■■□□□ 1.6
CLPTM1-209ENST00000588855 APAF1O14727 1248 aa25.04■■□□□ 1.6
CLPTM1-209ENST00000588855 IL17REQ8NFR9 667 aa25.04■■□□□ 1.6
CLPTM1-209ENST00000588855 RIPK4P57078 832 aa25.03■■□□□ 1.6
CLPTM1-209ENST00000588855 NEUROD2Q15784 382 aa25.03■■□□□ 1.6
CLPTM1-209ENST00000588855 CEMIPQ8WUJ3 1361 aa25.03■■□□□ 1.6
CLPTM1-209ENST00000588855 DCTN1Q14203 1278 aa25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 MCM10Q7L590 875 aa25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 CCDC125Q86Z20 511 aa25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 RTF1Q92541 710 aaKnown RBP25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 TMOD3Q9NYL9 352 aa25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 SENP3-EIF4A1A0A087X0R7 540 aa25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 SF3B2Q13435 895 aaKnown RBP25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 PIGBQ92521 554 aa25.02■■□□□ 1.6
CLPTM1-209ENST00000588855 RGPD3A6NKT7 1758 aaPredicted RBP25.01■■□□□ 1.59
CLPTM1-209ENST00000588855 RGPD4Q7Z3J3 1758 aa25.01■■□□□ 1.59
CLPTM1-209ENST00000588855 HTATSF1O43719 755 aaKnown RBP25.01■■□□□ 1.59
CLPTM1-209ENST00000588855 APBA3O96018 575 aa25.01■■□□□ 1.59
CLPTM1-209ENST00000588855 CABP4P57796 275 aa25.01■■□□□ 1.59
CLPTM1-209ENST00000588855 SOCS7O14512 581 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms