RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 UPF2Q9HAU5 1272 aaKnown RBP22.15■■□□□ 1.14
ERCC2-211ENST00000588652 CRB1P82279 1406 aa22.14■■□□□ 1.14
ERCC2-211ENST00000588652 HOXC9P31274 260 aa22.14■■□□□ 1.13
ERCC2-211ENST00000588652 CHMP4BQ9H444 224 aaKnown RBP22.14■■□□□ 1.13
ERCC2-211ENST00000588652 FOXO3O43524 673 aa22.13■■□□□ 1.13
ERCC2-211ENST00000588652 GSE1Q14687 1217 aa22.13■■□□□ 1.13
ERCC2-211ENST00000588652 TBC1D32Q96NH3 1257 aa22.13■■□□□ 1.13
ERCC2-211ENST00000588652 KIAA0232Q92628 1395 aa22.13■■□□□ 1.13
ERCC2-211ENST00000588652 KRT24Q2M2I5 525 aa22.12■■□□□ 1.13
ERCC2-211ENST00000588652 ADGRL3Q9HAR2 1447 aa22.12■■□□□ 1.13
ERCC2-211ENST00000588652 HAP1P54257 671 aaPredicted RBP22.12■■□□□ 1.13
ERCC2-211ENST00000588652 BECN1Q14457 450 aa22.12■■□□□ 1.13
ERCC2-211ENST00000588652 API5Q9BZZ5 524 aaKnown RBP22.12■■□□□ 1.13
ERCC2-211ENST00000588652 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
ERCC2-211ENST00000588652 NPHP4O75161 1426 aaPredicted RBP22.1■■□□□ 1.13
ERCC2-211ENST00000588652 RTF1Q92541 710 aaKnown RBP22.09■■□□□ 1.13
ERCC2-211ENST00000588652 NWD1Q149M9 1564 aa22.09■■□□□ 1.13
ERCC2-211ENST00000588652 GAS2L2Q8NHY3 880 aa22.09■■□□□ 1.13
ERCC2-211ENST00000588652 C14orf37Q86TY3 774 aa22.08■■□□□ 1.13
ERCC2-211ENST00000588652 LTN1O94822 1766 aa22.07■■□□□ 1.12
ERCC2-211ENST00000588652 NUCB1Q02818 461 aa22.07■■□□□ 1.12
ERCC2-211ENST00000588652 ESCO1Q5FWF5 840 aa22.06■■□□□ 1.12
ERCC2-211ENST00000588652 C1orf115Q9H7X2 142 aa22.06■■□□□ 1.12
ERCC2-211ENST00000588652 RTL1A6NKG5 1358 aa22.06■■□□□ 1.12
ERCC2-211ENST00000588652 MIS18AQ9NYP9 233 aa22.05■■□□□ 1.12
ERCC2-211ENST00000588652 PRKCSHP14314 528 aaPredicted RBP22.04■■□□□ 1.12
ERCC2-211ENST00000588652 RGS12O14924 1447 aa22.04■■□□□ 1.12
ERCC2-211ENST00000588652 HTATSF1O43719 755 aaKnown RBP22.04■■□□□ 1.12
ERCC2-211ENST00000588652 TSPYL4Q9UJ04 414 aa22.04■■□□□ 1.12
ERCC2-211ENST00000588652 NFAT5O94916 1531 aa22.03■■□□□ 1.12
ERCC2-211ENST00000588652 PSME1Q06323 249 aa22.03■■□□□ 1.12
ERCC2-211ENST00000588652 INTS3Q68E01 1043 aaKnown RBP22.03■■□□□ 1.12
ERCC2-211ENST00000588652 LTV1Q96GA3 475 aaPredicted RBP22.03■■□□□ 1.12
ERCC2-211ENST00000588652 LRRC37A3O60309 1634 aa22.03■■□□□ 1.12
ERCC2-211ENST00000588652 SIRT2Q8IXJ6 389 aa22.02■■□□□ 1.12
ERCC2-211ENST00000588652 CHD1LQ86WJ1 897 aa22.02■■□□□ 1.12
ERCC2-211ENST00000588652 GCC1Q96CN9 775 aa22.02■■□□□ 1.12
ERCC2-211ENST00000588652 LNPKQ9C0E8 428 aa22.01■■□□□ 1.11
ERCC2-211ENST00000588652 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
ERCC2-211ENST00000588652 TBC1D2Q9BYX2 928 aa22.01■■□□□ 1.11
ERCC2-211ENST00000588652 ANTXR1Q9H6X2 564 aa22.01■■□□□ 1.11
ERCC2-211ENST00000588652 PTPRCP08575 1304 aa22.01■■□□□ 1.11
ERCC2-211ENST00000588652 IP6K1Q92551 441 aa22■■□□□ 1.11
ERCC2-211ENST00000588652 SLKQ9H2G2 1235 aaPredicted RBP22■■□□□ 1.11
ERCC2-211ENST00000588652 IL27Q8NEV9 243 aa22■■□□□ 1.11
ERCC2-211ENST00000588652 SLC4A2P04920 1241 aa21.98■■□□□ 1.11
ERCC2-211ENST00000588652 ORAI2Q96SN7 254 aa21.98■■□□□ 1.11
ERCC2-211ENST00000588652 MAP3K5Q99683 1374 aa21.97■■□□□ 1.11
ERCC2-211ENST00000588652 KCNH5Q8NCM2 988 aa21.97■■□□□ 1.11
ERCC2-211ENST00000588652 ANKRD45Q5TZF3 282 aa21.97■■□□□ 1.11
ERCC2-211ENST00000588652 USHBP1Q8N6Y0 703 aa21.97■■□□□ 1.11
ERCC2-211ENST00000588652 C22orf23Q9BZE7 217 aa21.97■■□□□ 1.11
ERCC2-211ENST00000588652 MSH6P52701 1360 aa21.96■■□□□ 1.11
ERCC2-211ENST00000588652 PHRF1Q9P1Y6 1649 aaKnown RBP21.96■■□□□ 1.11
ERCC2-211ENST00000588652 MFAP1P55081 439 aaKnown RBP21.96■■□□□ 1.11
ERCC2-211ENST00000588652 IL17REQ8NFR9 667 aa21.96■■□□□ 1.11
ERCC2-211ENST00000588652 NBPF6Q5VWK0 638 aa21.93■■□□□ 1.1
ERCC2-211ENST00000588652 NBPF4Q96M43 638 aa21.93■■□□□ 1.1
ERCC2-211ENST00000588652 ATP10DQ9P241 1426 aa21.93■■□□□ 1.1
ERCC2-211ENST00000588652 G2E3Q7L622 706 aa21.92■■□□□ 1.1
ERCC2-211ENST00000588652 PROSER2Q86WR7 435 aaPredicted RBP21.92■■□□□ 1.1
ERCC2-211ENST00000588652 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
ERCC2-211ENST00000588652 XPCQ01831 940 aaPredicted RBP21.91■■□□□ 1.1
ERCC2-211ENST00000588652 BABAM1Q9NWV8 329 aa21.91■■□□□ 1.1
ERCC2-211ENST00000588652 TAF7Q15545 349 aaPredicted RBP21.9■■□□□ 1.1
ERCC2-211ENST00000588652 SLIT3O75094 1523 aa21.9■■□□□ 1.1
ERCC2-211ENST00000588652 FAM208AQ9UK61 1670 aaKnown RBP21.9■■□□□ 1.1
ERCC2-211ENST00000588652 GCP02774 474 aa21.9■■□□□ 1.1
ERCC2-211ENST00000588652 BMP2KLQ5H9B9 411 aa21.9■■□□□ 1.1
ERCC2-211ENST00000588652 ANKRD44Q8N8A2 993 aa21.9■■□□□ 1.1
ERCC2-211ENST00000588652 DCTPP1Q9H773 170 aa21.9■■□□□ 1.1
ERCC2-211ENST00000588652 ZBTB7CA1YPR0 619 aa21.89■■□□□ 1.1
ERCC2-211ENST00000588652 BRPF3Q9ULD4 1205 aa21.89■■□□□ 1.1
ERCC2-211ENST00000588652 TRPM3Q9HCF6 1732 aaPredicted RBP21.89■■□□□ 1.09
ERCC2-211ENST00000588652 CACNA1FO60840 1977 aa21.89■■□□□ 1.09
ERCC2-211ENST00000588652 RPAP2Q8IXW5 612 aaPredicted RBP21.89■■□□□ 1.09
ERCC2-211ENST00000588652 MEIS3Q99687 375 aa21.89■■□□□ 1.09
ERCC2-211ENST00000588652 STK31Q9BXU1 1019 aa21.89■■□□□ 1.09
ERCC2-211ENST00000588652 CCDC30Q5VVM6 783 aa21.88■■□□□ 1.09
ERCC2-211ENST00000588652 CEP85Q6P2H3 762 aa21.88■■□□□ 1.09
ERCC2-211ENST00000588652 ARHGEF25Q86VW2 580 aa21.88■■□□□ 1.09
ERCC2-211ENST00000588652 SOS1Q07889 1333 aaPredicted RBP21.88■■□□□ 1.09
ERCC2-211ENST00000588652 CEMIPQ8WUJ3 1361 aa21.88■■□□□ 1.09
ERCC2-211ENST00000588652 C1orf167Q5SNV9 1468 aa21.87■■□□□ 1.09
ERCC2-211ENST00000588652 F6X3S4 739 aa21.87■■□□□ 1.09
ERCC2-211ENST00000588652 C19orf44Q9H6X5 657 aa21.87■■□□□ 1.09
ERCC2-211ENST00000588652 LRRC59Q96AG4 307 aaKnown RBP21.86■■□□□ 1.09
ERCC2-211ENST00000588652 KIF1AQ12756 1690 aa21.86■■□□□ 1.09
ERCC2-211ENST00000588652 SLC4A10Q6U841 1118 aa21.86■■□□□ 1.09
ERCC2-211ENST00000588652 CCT4P50991 539 aaKnown RBP21.85■■□□□ 1.09
ERCC2-211ENST00000588652 LMOD2Q6P5Q4 547 aa21.85■■□□□ 1.09
ERCC2-211ENST00000588652 KRT28Q7Z3Y7 464 aa21.85■■□□□ 1.09
ERCC2-211ENST00000588652 SPRYD3Q8NCJ5 442 aa21.85■■□□□ 1.09
ERCC2-211ENST00000588652 MED1Q15648 1581 aaPredicted RBP21.84■■□□□ 1.09
ERCC2-211ENST00000588652 FLIIQ13045 1269 aa21.84■■□□□ 1.09
ERCC2-211ENST00000588652 RBM25P49756 843 aaKnown RBP21.84■■□□□ 1.09
ERCC2-211ENST00000588652 PLEKHG5O94827 1062 aa21.83■■□□□ 1.09
ERCC2-211ENST00000588652 NCAPD2Q15021 1401 aa21.83■■□□□ 1.08
ERCC2-211ENST00000588652 NECTIN2Q92692 538 aa21.82■■□□□ 1.08
ERCC2-211ENST00000588652 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms