RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 FAM196AQ6ZSG2 479 aa31.46■■■□□ 2.63
CIRBP-216ENST00000588090 KDRP35968 1356 aa31.45■■■□□ 2.63
CIRBP-216ENST00000588090 ZCRB1Q8TBF4 217 aaKnown RBP31.45■■■□□ 2.62
CIRBP-216ENST00000588090 MARCH10Q8NA82 808 aaPredicted RBP31.44■■■□□ 2.62
CIRBP-216ENST00000588090 SULT6B1Q6IMI4 303 aa31.42■■■□□ 2.62
CIRBP-216ENST00000588090 NUDCQ9Y266 331 aa31.42■■■□□ 2.62
CIRBP-216ENST00000588090 BCL9O00512 1426 aa31.41■■■□□ 2.62
CIRBP-216ENST00000588090 UPF1Q92900 1129 aaKnown RBP eCLIP31.4■■■□□ 2.62
CIRBP-216ENST00000588090 U2SURPO15042 1029 aaKnown RBP31.4■■■□□ 2.62
CIRBP-216ENST00000588090 AEBP1Q8IUX7 1158 aa31.4■■■□□ 2.62
CIRBP-216ENST00000588090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.4■■■□□ 2.624e-13■□□□□ 8.8
CIRBP-216ENST00000588090 SBF2Q86WG5 1849 aa31.39■■■□□ 2.62
CIRBP-216ENST00000588090 PCDH11XQ9BZA7 1347 aa31.38■■■□□ 2.61
CIRBP-216ENST00000588090 PCDH11YQ9BZA8 1340 aa31.38■■■□□ 2.61
CIRBP-216ENST00000588090 CCDC125Q86Z20 511 aa31.38■■■□□ 2.61
CIRBP-216ENST00000588090 DDX54Q8TDD1 881 aaKnown RBP31.38■■■□□ 2.61
CIRBP-216ENST00000588090 SPG7Q9UQ90 795 aa31.38■■■□□ 2.61
CIRBP-216ENST00000588090 ANP32CO43423 234 aa31.35■■■□□ 2.61
CIRBP-216ENST00000588090 HMOX1P09601 288 aa31.35■■■□□ 2.61
CIRBP-216ENST00000588090 AMOTQ4VCS5 1084 aa31.33■■■□□ 2.61
CIRBP-216ENST00000588090 TNS1Q9HBL0 1735 aaKnown RBP31.32■■■□□ 2.6
CIRBP-216ENST00000588090 PLEKHO1Q53GL0 409 aaPredicted RBP31.31■■■□□ 2.6
CIRBP-216ENST00000588090 U2AF1L5P0DN76 240 aaPredicted RBP31.3■■■□□ 2.6
CIRBP-216ENST00000588090 U2AF1Q01081 240 aaKnown RBP eCLIP31.3■■■□□ 2.6
CIRBP-216ENST00000588090 SF3B2Q13435 895 aaKnown RBP31.3■■■□□ 2.6
CIRBP-216ENST00000588090 NHSQ6T4R5 1651 aa31.29■■■□□ 2.6
CIRBP-216ENST00000588090 TRIM37O94972 964 aa31.29■■■□□ 2.6
CIRBP-216ENST00000588090 KAT6BQ8WYB5 2073 aa31.29■■■□□ 2.6
CIRBP-216ENST00000588090 CYP27B1O15528 508 aa31.28■■■□□ 2.6
CIRBP-216ENST00000588090 DOT1LQ8TEK3 1739 aa31.27■■■□□ 2.6
CIRBP-216ENST00000588090 IFNL2Q8IZJ0 200 aa31.26■■■□□ 2.59
CIRBP-216ENST00000588090 FCHSD2O94868 740 aa31.24■■■□□ 2.59
CIRBP-216ENST00000588090 RSPH6AQ9H0K4 717 aa31.24■■■□□ 2.59
CIRBP-216ENST00000588090 PHKG2P15735 406 aa31.23■■■□□ 2.59
CIRBP-216ENST00000588090 BCL11BQ9C0K0 894 aaPredicted RBP31.23■■■□□ 2.59
CIRBP-216ENST00000588090 NKX1-1Q15270 411 aaPredicted RBP31.22■■■□□ 2.59
CIRBP-216ENST00000588090 ZNF530Q6P9A1 599 aaPredicted RBP31.22■■■□□ 2.59
CIRBP-216ENST00000588090 PRKAR2BP31323 418 aa31.21■■■□□ 2.59
CIRBP-216ENST00000588090 ACSBG1Q96GR2 724 aa31.21■■■□□ 2.59
CIRBP-216ENST00000588090 C1orf141Q5JVX7 400 aa31.2■■■□□ 2.58
CIRBP-216ENST00000588090 TOGARAM1Q9Y4F4 1720 aa31.19■■■□□ 2.58
CIRBP-216ENST00000588090 HSP90AB1P08238 724 aaKnown RBP31.19■■■□□ 2.58
CIRBP-216ENST00000588090 BAG6P46379 1132 aa31.19■■■□□ 2.58
CIRBP-216ENST00000588090 BTAF1O14981 1849 aa31.17■■■□□ 2.58
CIRBP-216ENST00000588090 KCNQ2O43526 872 aa31.17■■■□□ 2.58
CIRBP-216ENST00000588090 APBA3O96018 575 aa31.16■■■□□ 2.58
CIRBP-216ENST00000588090 MTHFSDQ2M296 383 aaKnown RBP31.16■■■□□ 2.58
CIRBP-216ENST00000588090 PNNQ9H307 717 aaKnown RBP31.16■■■□□ 2.58
CIRBP-216ENST00000588090 ITGB4P16144 1822 aa31.16■■■□□ 2.58
CIRBP-216ENST00000588090 RGPD3A6NKT7 1758 aaPredicted RBP31.16■■■□□ 2.58
CIRBP-216ENST00000588090 RGPD4Q7Z3J3 1758 aa31.16■■■□□ 2.58
CIRBP-216ENST00000588090 WDR43Q15061 677 aaKnown RBP eCLIP31.15■■■□□ 2.58
CIRBP-216ENST00000588090 AKAP4Q5JQC9 854 aa31.14■■■□□ 2.58
CIRBP-216ENST00000588090 GAS2L2Q8NHY3 880 aa31.14■■■□□ 2.58
CIRBP-216ENST00000588090 SYTL4Q96C24 671 aaPredicted RBP31.14■■■□□ 2.58
CIRBP-216ENST00000588090 NEFMP07197 916 aa31.14■■■□□ 2.57
CIRBP-216ENST00000588090 PRIM1P49642 420 aaKnown RBP31.14■■■□□ 2.57
CIRBP-216ENST00000588090 PTF1AQ7RTS3 328 aa31.14■■■□□ 2.57
CIRBP-216ENST00000588090 DCAF5Q96JK2 942 aa31.14■■■□□ 2.57
CIRBP-216ENST00000588090 DEFB132Q7Z7B7 95 aa31.13■■■□□ 2.57
CIRBP-216ENST00000588090 VIRMAQ69YN4 1812 aaKnown RBP31.13■■■□□ 2.57
CIRBP-216ENST00000588090 SCN11AQ9UI33 1791 aa31.12■■■□□ 2.57
CIRBP-216ENST00000588090 PHACTR3Q96KR7 559 aa31.12■■■□□ 2.57
CIRBP-216ENST00000588090 KDM6AO15550 1401 aaPredicted RBP31.1■■■□□ 2.57
CIRBP-216ENST00000588090 PLSCR1O15162 318 aa31.08■■■□□ 2.57
CIRBP-216ENST00000588090 EN1Q05925 392 aaPredicted RBP31.08■■■□□ 2.57
CIRBP-216ENST00000588090 PLEKHF1Q96S99 279 aa31.08■■■□□ 2.57
CIRBP-216ENST00000588090 MRS2Q9HD23 443 aa31.08■■■□□ 2.57
CIRBP-216ENST00000588090 ADAMTS7Q9UKP4 1686 aa31.07■■■□□ 2.56
CIRBP-216ENST00000588090 MAP3K5Q99683 1374 aa31.07■■■□□ 2.56
CIRBP-216ENST00000588090 MAPK8IP3Q9UPT6 1336 aa31.07■■■□□ 2.56
CIRBP-216ENST00000588090 ERVV-2B6SEH9 535 aa31.07■■■□□ 2.56
CIRBP-216ENST00000588090 CCDC184Q52MB2 194 aa31.07■■■□□ 2.56
CIRBP-216ENST00000588090 MPRIPQ6WCQ1 1025 aa31.07■■■□□ 2.56
CIRBP-216ENST00000588090 CAMKK2Q96RR4 588 aa31.05■■■□□ 2.56
CIRBP-216ENST00000588090 RREB1Q92766 1687 aa31.04■■■□□ 2.56
CIRBP-216ENST00000588090 GNAT3A8MTJ3 354 aa31.04■■■□□ 2.56
CIRBP-216ENST00000588090 DIEXFQ68CQ4 756 aaKnown RBP31.04■■■□□ 2.56
CIRBP-216ENST00000588090 TMOD3Q9NYL9 352 aa31.04■■■□□ 2.56
CIRBP-216ENST00000588090 ADAMTS8Q9UP79 889 aa31.04■■■□□ 2.56
CIRBP-216ENST00000588090 EZH2Q15910 746 aaKnown RBP31.02■■■□□ 2.56
CIRBP-216ENST00000588090 DLG5Q8TDM6 1919 aa31.02■■■□□ 2.56
CIRBP-216ENST00000588090 PIGBQ92521 554 aa31.01■■■□□ 2.55
CIRBP-216ENST00000588090 LY75O60449 1722 aa31■■■□□ 2.55
CIRBP-216ENST00000588090 RNMTO43148 476 aaKnown RBP31■■■□□ 2.55
CIRBP-216ENST00000588090 CABP4P57796 275 aa31■■■□□ 2.55
CIRBP-216ENST00000588090 MRC1P22897 1456 aa30.99■■■□□ 2.55
CIRBP-216ENST00000588090 LGR6Q9HBX8 967 aa30.98■■■□□ 2.55
CIRBP-216ENST00000588090 PNISRQ8TF01 805 aaKnown RBP30.97■■■□□ 2.55
CIRBP-216ENST00000588090 RUNDC1Q96C34 613 aa30.97■■■□□ 2.55
CIRBP-216ENST00000588090 NUP188Q5SRE5 1749 aa30.97■■■□□ 2.55
CIRBP-216ENST00000588090 NFE2L2Q16236 605 aa30.96■■■□□ 2.55
CIRBP-216ENST00000588090 HTATSF1O43719 755 aaKnown RBP30.95■■■□□ 2.55
CIRBP-216ENST00000588090 CCDC146Q8IYE0 955 aa30.95■■■□□ 2.55
CIRBP-216ENST00000588090 RTF1Q92541 710 aaKnown RBP30.95■■■□□ 2.55
CIRBP-216ENST00000588090 SMARCC1Q92922 1105 aaPredicted RBP30.95■■■□□ 2.55
CIRBP-216ENST00000588090 SLC52A2Q9HAB3 445 aa30.95■■■□□ 2.55
CIRBP-216ENST00000588090 TXNRD1Q16881 649 aa30.95■■■□□ 2.54
CIRBP-216ENST00000588090 NFATC2IPQ8NCF5 419 aa30.94■■■□□ 2.54
CIRBP-216ENST00000588090 CEMIPQ8WUJ3 1361 aa30.93■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms