RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 DLG5Q8TDM6 1919 aa21.01■□□□□ 0.95
PRKCSH-205ENST00000587327 RGPD8O14715 1765 aaPredicted RBP21■□□□□ 0.95
PRKCSH-205ENST00000587327 RIMS1Q86UR5 1692 aaKnown RBP21■□□□□ 0.95
PRKCSH-205ENST00000587327 KIF24Q5T7B8 1368 aa21■□□□□ 0.95
PRKCSH-205ENST00000587327 FAM83GA6ND36 823 aa21■□□□□ 0.95
PRKCSH-205ENST00000587327 TNPO1Q92973 898 aaKnown RBP20.99■□□□□ 0.95
PRKCSH-205ENST00000587327 ARXQ96QS3 562 aa20.99■□□□□ 0.95
PRKCSH-205ENST00000587327 USP31Q70CQ4 1352 aa20.98■□□□□ 0.95
PRKCSH-205ENST00000587327 DCTN1Q14203 1278 aa20.97■□□□□ 0.95
PRKCSH-205ENST00000587327 RAB3GAP1Q15042 981 aa20.97■□□□□ 0.95
PRKCSH-205ENST00000587327 CDC45O75419 566 aa20.96■□□□□ 0.95
PRKCSH-205ENST00000587327 CD2BP2O95400 341 aaKnown RBP20.96■□□□□ 0.95
PRKCSH-205ENST00000587327 RGPD1P0DJD0 1748 aa20.96■□□□□ 0.95
PRKCSH-205ENST00000587327 DCTPP1Q9H773 170 aa20.96■□□□□ 0.95
PRKCSH-205ENST00000587327 K7ELQ4 463 aaPredicted RBP20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 MRE11P49959 708 aa20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 EIF4A2Q14240 407 aaKnown RBP20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 GBP4Q96PP9 640 aa20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 RRAGDQ9NQL2 400 aaPredicted RBP20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 INTS3Q68E01 1043 aaKnown RBP20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 PLEKHM2Q8IWE5 1019 aa20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 PANK2Q9BZ23 570 aa20.95■□□□□ 0.94
PRKCSH-205ENST00000587327 HSP90AA1P07900 732 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 GSPT1P15170 499 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 ISY1Q9ULR0 285 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 KCNA6P17658 529 aa20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 TTC21AQ8NDW8 1320 aa20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 RBM42Q9BTD8 480 aaKnown RBP20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 PIK3C2AO00443 1686 aa20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 FMN2Q9NZ56 1722 aa20.93■□□□□ 0.94
PRKCSH-205ENST00000587327 ZNF142P52746 1687 aaPredicted RBP20.92■□□□□ 0.94
PRKCSH-205ENST00000587327 HAP1P54257 671 aaPredicted RBP20.92■□□□□ 0.94
PRKCSH-205ENST00000587327 AEBP1Q8IUX7 1158 aa20.92■□□□□ 0.94
PRKCSH-205ENST00000587327 ANKARQ7Z5J8 1434 aa20.92■□□□□ 0.94
PRKCSH-205ENST00000587327 CHL1O00533 1208 aa20.9■□□□□ 0.94
PRKCSH-205ENST00000587327 SKOR2Q2VWA4 1001 aaPredicted RBP20.9■□□□□ 0.94
PRKCSH-205ENST00000587327 SULT6B1Q6IMI4 303 aa20.9■□□□□ 0.94
PRKCSH-205ENST00000587327 ANKRD44Q8N8A2 993 aa20.9■□□□□ 0.94
PRKCSH-205ENST00000587327 GRPEL1Q9HAV7 217 aa20.9■□□□□ 0.94
PRKCSH-205ENST00000587327 PTMSP20962 102 aa20.89■□□□□ 0.94
PRKCSH-205ENST00000587327 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.94
PRKCSH-205ENST00000587327 TTC22Q5TAA0 569 aa20.89■□□□□ 0.93
PRKCSH-205ENST00000587327 RPAP2Q8IXW5 612 aaPredicted RBP20.89■□□□□ 0.93
PRKCSH-205ENST00000587327 FOXD4L1Q9NU39 408 aa20.89■□□□□ 0.93
PRKCSH-205ENST00000587327 NGDNQ8NEJ9 315 aaKnown RBP20.88■□□□□ 0.93
PRKCSH-205ENST00000587327 RGS12O14924 1447 aa20.88■□□□□ 0.93
PRKCSH-205ENST00000587327 ATP10DQ9P241 1426 aa20.88■□□□□ 0.93
PRKCSH-205ENST00000587327 KRT24Q2M2I5 525 aa20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 GAS2L2Q8NHY3 880 aa20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 MARF1Q9Y4F3 1742 aaKnown RBP20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 MAP3K19Q56UN5 1328 aa20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 ADAMTSL3P82987 1691 aa20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 SOX12O15370 315 aa20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 C16orf71Q8IYS4 520 aaPredicted RBP20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 KIAA0232Q92628 1395 aa20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 CHD2O14647 1828 aaKnown RBP20.87■□□□□ 0.93
PRKCSH-205ENST00000587327 CEP85Q6P2H3 762 aa20.86■□□□□ 0.93
PRKCSH-205ENST00000587327 PTPRCP08575 1304 aa20.85■□□□□ 0.93
PRKCSH-205ENST00000587327 RABEP1Q15276 862 aa20.85■□□□□ 0.93
PRKCSH-205ENST00000587327 CLEC17AQ6ZS10 378 aa20.85■□□□□ 0.93
PRKCSH-205ENST00000587327 MCM10Q7L590 875 aa20.85■□□□□ 0.93
PRKCSH-205ENST00000587327 USP54Q70EL1 1684 aa20.85■□□□□ 0.93
PRKCSH-205ENST00000587327 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
PRKCSH-205ENST00000587327 ARHGEF10O15013 1369 aa20.84■□□□□ 0.93
PRKCSH-205ENST00000587327 FLT4P35916 1363 aa20.84■□□□□ 0.93
PRKCSH-205ENST00000587327 USP26Q9BXU7 913 aa20.84■□□□□ 0.93
PRKCSH-205ENST00000587327 RTL1A6NKG5 1358 aa20.83■□□□□ 0.93
PRKCSH-205ENST00000587327 SSFA2P28290 1259 aa20.82■□□□□ 0.92
PRKCSH-205ENST00000587327 OTUD7AQ8TE49 926 aaPredicted RBP20.82■□□□□ 0.92
PRKCSH-205ENST00000587327 MSH6P52701 1360 aa20.82■□□□□ 0.92
PRKCSH-205ENST00000587327 GAS2L3Q86XJ1 694 aa20.81■□□□□ 0.92
PRKCSH-205ENST00000587327 SDSP20132 328 aa20.8■□□□□ 0.92
PRKCSH-205ENST00000587327 ANKLE2Q86XL3 938 aa20.8■□□□□ 0.92
PRKCSH-205ENST00000587327 MEIS3Q99687 375 aa20.8■□□□□ 0.92
PRKCSH-205ENST00000587327 GOLGA6L22H0YM25 854 aa20.8■□□□□ 0.92
PRKCSH-205ENST00000587327 CLCN1P35523 988 aa20.8■□□□□ 0.92
PRKCSH-205ENST00000587327 SLC4A2P04920 1241 aa20.79■□□□□ 0.92
PRKCSH-205ENST00000587327 CASC1Q6TDU7 716 aa20.79■□□□□ 0.92
PRKCSH-205ENST00000587327 KDRP35968 1356 aa20.79■□□□□ 0.92
PRKCSH-205ENST00000587327 CRB1P82279 1406 aa20.79■□□□□ 0.92
PRKCSH-205ENST00000587327 SMARCA5O60264 1052 aaPredicted RBP20.78■□□□□ 0.92
PRKCSH-205ENST00000587327 BAG4O95429 457 aaKnown RBP20.78■□□□□ 0.92
PRKCSH-205ENST00000587327 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
PRKCSH-205ENST00000587327 APBB1O00213 710 aa20.76■□□□□ 0.91
PRKCSH-205ENST00000587327 NLRP6P59044 892 aa20.76■□□□□ 0.91
PRKCSH-205ENST00000587327 AMPHP49418 695 aa20.75■□□□□ 0.91
PRKCSH-205ENST00000587327 NUCB2P80303 420 aa20.75■□□□□ 0.91
PRKCSH-205ENST00000587327 KLHL40Q2TBA0 621 aa20.75■□□□□ 0.91
PRKCSH-205ENST00000587327 HMMRO75330 724 aa20.75■□□□□ 0.91
PRKCSH-205ENST00000587327 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
PRKCSH-205ENST00000587327 SETD1BQ9UPS6 1966 aaKnown RBP20.74■□□□□ 0.91
PRKCSH-205ENST00000587327 REC8O95072 547 aa20.74■□□□□ 0.91
PRKCSH-205ENST00000587327 NUTM2GQ5VZR2 741 aa20.74■□□□□ 0.91
PRKCSH-205ENST00000587327 ADGRL3Q9HAR2 1447 aa20.74■□□□□ 0.91
PRKCSH-205ENST00000587327 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
PRKCSH-205ENST00000587327 EYA1Q99502 592 aa20.73■□□□□ 0.91
PRKCSH-205ENST00000587327 CYP2E1P05181 493 aaPredicted RBP20.73■□□□□ 0.91
PRKCSH-205ENST00000587327 RBM33Q96EV2 1170 aaKnown RBP20.73■□□□□ 0.91
PRKCSH-205ENST00000587327 OSBPL3Q9H4L5 887 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms