RNA–Protein interactions for RNA: ENST00000586339.1

HDAC5-203, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-203ENST00000586339 DDX54Q8TDD1 881 aaKnown RBP19.55■□□□□ 0.72
HDAC5-203ENST00000586339 ZCRB1Q8TBF4 217 aaKnown RBP19.54■□□□□ 0.72
HDAC5-203ENST00000586339 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
HDAC5-203ENST00000586339 NBPF6Q5VWK0 638 aa19.53■□□□□ 0.72
HDAC5-203ENST00000586339 NBPF4Q96M43 638 aa19.53■□□□□ 0.72
HDAC5-203ENST00000586339 CARD14Q9BXL6 1004 aa19.53■□□□□ 0.72
HDAC5-203ENST00000586339 PDGFDQ9GZP0 370 aaPredicted RBP19.53■□□□□ 0.72
HDAC5-203ENST00000586339 PKD1L3Q7Z443 1732 aa19.52■□□□□ 0.72
HDAC5-203ENST00000586339 ZBTB7AO95365 584 aa19.52■□□□□ 0.72
HDAC5-203ENST00000586339 MTFR1LQ9H019 292 aa19.52■□□□□ 0.72
HDAC5-203ENST00000586339 TUBGCP6Q96RT7 1819 aa19.52■□□□□ 0.72
HDAC5-203ENST00000586339 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
HDAC5-203ENST00000586339 NSD2O96028 1365 aa19.5■□□□□ 0.71
HDAC5-203ENST00000586339 PTGER2P43116 358 aa19.5■□□□□ 0.71
HDAC5-203ENST00000586339 HSP90AB2PQ58FF8 381 aa19.5■□□□□ 0.71
HDAC5-203ENST00000586339 COL24A1Q17RW2 1714 aa19.5■□□□□ 0.71
HDAC5-203ENST00000586339 NCAPD2Q15021 1401 aa19.5■□□□□ 0.71
HDAC5-203ENST00000586339 LRRC4BQ9NT99 713 aa19.49■□□□□ 0.71
HDAC5-203ENST00000586339 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
HDAC5-203ENST00000586339 TATP17735 454 aaPredicted RBP19.48■□□□□ 0.71
HDAC5-203ENST00000586339 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
HDAC5-203ENST00000586339 SYTL4Q96C24 671 aaPredicted RBP19.48■□□□□ 0.71
HDAC5-203ENST00000586339 PCDH11XQ9BZA7 1347 aa19.48■□□□□ 0.71
HDAC5-203ENST00000586339 PCDH11YQ9BZA8 1340 aa19.48■□□□□ 0.71
HDAC5-203ENST00000586339 ITGB4P16144 1822 aa19.47■□□□□ 0.71
HDAC5-203ENST00000586339 ZNF827Q17R98 1081 aa19.47■□□□□ 0.71
HDAC5-203ENST00000586339 USHBP1Q8N6Y0 703 aa19.47■□□□□ 0.71
HDAC5-203ENST00000586339 ATF5Q9Y2D1 282 aaPredicted RBP19.47■□□□□ 0.71
HDAC5-203ENST00000586339 AKT1S1Q96B36 256 aa19.46■□□□□ 0.71
HDAC5-203ENST00000586339 SGIP1Q9BQI5 828 aa19.46■□□□□ 0.71
HDAC5-203ENST00000586339 EIF4G2P78344 907 aaKnown RBP eCLIP19.45■□□□□ 0.7
HDAC5-203ENST00000586339 EMILIN1Q9Y6C2 1016 aa19.45■□□□□ 0.7
HDAC5-203ENST00000586339 TAF1LQ8IZX4 1826 aa19.45■□□□□ 0.7
HDAC5-203ENST00000586339 TOGARAM1Q9Y4F4 1720 aa19.45■□□□□ 0.7
HDAC5-203ENST00000586339 C5P01031 1676 aa19.44■□□□□ 0.7
HDAC5-203ENST00000586339 WASHC2AQ641Q2 1341 aa19.44■□□□□ 0.7
HDAC5-203ENST00000586339 SLC16A10Q8TF71 515 aa19.43■□□□□ 0.7
HDAC5-203ENST00000586339 CHD4Q14839 1912 aa19.43■□□□□ 0.7
HDAC5-203ENST00000586339 MAP3K5Q99683 1374 aa19.43■□□□□ 0.7
HDAC5-203ENST00000586339 HMGB2P26583 209 aaKnown RBP19.42■□□□□ 0.7
HDAC5-203ENST00000586339 PLEKHG2Q9H7P9 1386 aa19.41■□□□□ 0.7
HDAC5-203ENST00000586339 HSPA5P11021 654 aaKnown RBP19.4■□□□□ 0.7
HDAC5-203ENST00000586339 CCER1Q8TC90 406 aaPredicted RBP19.4■□□□□ 0.7
HDAC5-203ENST00000586339 CCNL1Q9UK58 526 aaPredicted RBP19.4■□□□□ 0.7
HDAC5-203ENST00000586339 PNPLA7Q6ZV29 1317 aa19.4■□□□□ 0.7
HDAC5-203ENST00000586339 UTRNP46939 3433 aa19.39■□□□□ 0.7
HDAC5-203ENST00000586339 PPM1GO15355 546 aaPredicted RBP19.39■□□□□ 0.69
HDAC5-203ENST00000586339 CYP27B1O15528 508 aa19.39■□□□□ 0.69
HDAC5-203ENST00000586339 YY1P25490 414 aa19.39■□□□□ 0.69
HDAC5-203ENST00000586339 ARXQ96QS3 562 aa19.39■□□□□ 0.69
HDAC5-203ENST00000586339 SYT17Q9BSW7 474 aa19.39■□□□□ 0.69
HDAC5-203ENST00000586339 POLR3GLQ9BT43 218 aa19.39■□□□□ 0.69
HDAC5-203ENST00000586339 FHDC1Q9C0D6 1143 aaPredicted RBP19.39■□□□□ 0.69
HDAC5-203ENST00000586339 TFCP2L1Q9NZI6 479 aa19.38■□□□□ 0.69
HDAC5-203ENST00000586339 POLKQ9UBT6 870 aa19.38■□□□□ 0.69
HDAC5-203ENST00000586339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.37■□□□□ 0.692e-6■■■■□ 24.3
HDAC5-203ENST00000586339 NKX1-1Q15270 411 aaPredicted RBP19.36■□□□□ 0.69
HDAC5-203ENST00000586339 SPG7Q9UQ90 795 aa19.36■□□□□ 0.69
HDAC5-203ENST00000586339 PALLDQ8WX93 1383 aa19.35■□□□□ 0.69
HDAC5-203ENST00000586339 POLD1P28340 1107 aa19.35■□□□□ 0.69
HDAC5-203ENST00000586339 KCNQ4P56696 695 aa19.35■□□□□ 0.69
HDAC5-203ENST00000586339 EYA1Q99502 592 aa19.35■□□□□ 0.69
HDAC5-203ENST00000586339 SMARCC1Q92922 1105 aaPredicted RBP19.34■□□□□ 0.69
HDAC5-203ENST00000586339 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
HDAC5-203ENST00000586339 UBR3Q6ZT12 1888 aa19.33■□□□□ 0.69
HDAC5-203ENST00000586339 PANK3Q9H999 370 aa19.33■□□□□ 0.68
HDAC5-203ENST00000586339 EIF4A2Q14240 407 aaKnown RBP19.32■□□□□ 0.68
HDAC5-203ENST00000586339 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
HDAC5-203ENST00000586339 IGSF1Q8N6C5 1336 aa19.3■□□□□ 0.68
HDAC5-203ENST00000586339 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
HDAC5-203ENST00000586339 FLAD1Q8NFF5 587 aa19.3■□□□□ 0.68
HDAC5-203ENST00000586339 GOLGB1Q14789 3259 aaKnown RBP19.29■□□□□ 0.68
HDAC5-203ENST00000586339 IFNL2Q8IZJ0 200 aa19.29■□□□□ 0.68
HDAC5-203ENST00000586339 COL23A1Q86Y22 540 aaPredicted RBP19.28■□□□□ 0.68
HDAC5-203ENST00000586339 PIGBQ92521 554 aa19.28■□□□□ 0.68
HDAC5-203ENST00000586339 ZNF831Q5JPB2 1677 aa19.27■□□□□ 0.68
HDAC5-203ENST00000586339 PHKG2P15735 406 aa19.27■□□□□ 0.68
HDAC5-203ENST00000586339 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
HDAC5-203ENST00000586339 MSH5O43196 834 aa19.25■□□□□ 0.67
HDAC5-203ENST00000586339 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
HDAC5-203ENST00000586339 KNSTRNQ9Y448 316 aa19.25■□□□□ 0.67
HDAC5-203ENST00000586339 AK7Q96M32 723 aa19.24■□□□□ 0.67
HDAC5-203ENST00000586339 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
HDAC5-203ENST00000586339 HSP90AB1P08238 724 aaKnown RBP19.23■□□□□ 0.67
HDAC5-203ENST00000586339 SIK1P57059 783 aa19.23■□□□□ 0.67
HDAC5-203ENST00000586339 KLHL34Q8N239 644 aa19.22■□□□□ 0.67
HDAC5-203ENST00000586339 COL5A3P25940 1745 aaPredicted RBP19.21■□□□□ 0.67
HDAC5-203ENST00000586339 AMOTQ4VCS5 1084 aa19.21■□□□□ 0.67
HDAC5-203ENST00000586339 PLEKHO1Q53GL0 409 aaPredicted RBP19.21■□□□□ 0.67
HDAC5-203ENST00000586339 KDRP35968 1356 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 SCN11AQ9UI33 1791 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 ERVV-2B6SEH9 535 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 SSFA2P28290 1259 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 GPR162Q16538 588 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 AMER1Q5JTC6 1135 aaPredicted RBP19.2■□□□□ 0.66
HDAC5-203ENST00000586339 DCAF5Q96JK2 942 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 ASAP1Q9ULH1 1129 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 VIRMAQ69YN4 1812 aaKnown RBP19.2■□□□□ 0.66
HDAC5-203ENST00000586339 KIF7Q2M1P5 1343 aa19.2■□□□□ 0.66
HDAC5-203ENST00000586339 MSL1Q68DK7 614 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms