RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 ANKRD36BQ8N2N9 1353 aa27.58■■■□□ 2.01
PTBP1-208ENST00000585956 COL24A1Q17RW2 1714 aa27.58■■■□□ 2.01
PTBP1-208ENST00000585956 DCAF8L1A6NGE4 600 aa27.57■■■□□ 2
PTBP1-208ENST00000585956 GGNBP2Q9H3C7 697 aa27.57■■■□□ 2
PTBP1-208ENST00000585956 AMPHP49418 695 aa27.56■■■□□ 2
PTBP1-208ENST00000585956 NBPF6Q5VWK0 638 aa27.56■■■□□ 2
PTBP1-208ENST00000585956 NBPF4Q96M43 638 aa27.56■■■□□ 2
PTBP1-208ENST00000585956 FYB1O15117 783 aa27.55■■■□□ 2
PTBP1-208ENST00000585956 SYTL4Q96C24 671 aaPredicted RBP27.55■■■□□ 2
PTBP1-208ENST00000585956 ZNF784Q8NCA9 323 aaPredicted RBP27.53■■■□□ 2
PTBP1-208ENST00000585956 ZCRB1Q8TBF4 217 aaKnown RBP27.52■■■□□ 2
PTBP1-208ENST00000585956 MAP3K5Q99683 1374 aa27.51■■□□□ 1.99
PTBP1-208ENST00000585956 SLC27A3Q5K4L6 730 aa27.51■■□□□ 1.99
PTBP1-208ENST00000585956 RTL1A6NKG5 1358 aa27.5■■□□□ 1.99
PTBP1-208ENST00000585956 USP47Q96K76 1375 aa27.5■■□□□ 1.99
PTBP1-208ENST00000585956 KIF20BQ96Q89 1820 aa27.5■■□□□ 1.99
PTBP1-208ENST00000585956 CHD4Q14839 1912 aa27.49■■□□□ 1.99
PTBP1-208ENST00000585956 HSP90AB2PQ58FF8 381 aa27.47■■□□□ 1.99
PTBP1-208ENST00000585956 TOGARAM1Q9Y4F4 1720 aa27.46■■□□□ 1.99
PTBP1-208ENST00000585956 NLGN2Q8NFZ4 835 aa27.45■■□□□ 1.98
PTBP1-208ENST00000585956 CARD14Q9BXL6 1004 aa27.45■■□□□ 1.98
PTBP1-208ENST00000585956 TFCP2L1Q9NZI6 479 aa27.45■■□□□ 1.98
PTBP1-208ENST00000585956 KLHL34Q8N239 644 aa27.43■■□□□ 1.98
PTBP1-208ENST00000585956 CCNL1Q9UK58 526 aaPredicted RBP27.43■■□□□ 1.98
PTBP1-208ENST00000585956 TMF1P82094 1093 aa27.42■■□□□ 1.98
PTBP1-208ENST00000585956 COL23A1Q86Y22 540 aaPredicted RBP27.41■■□□□ 1.98
PTBP1-208ENST00000585956 INSRP06213 1382 aa27.4■■□□□ 1.98
PTBP1-208ENST00000585956 SLC16A10Q8TF71 515 aa27.4■■□□□ 1.98
PTBP1-208ENST00000585956 EMILIN1Q9Y6C2 1016 aa27.4■■□□□ 1.98
PTBP1-208ENST00000585956 C5P01031 1676 aa27.4■■□□□ 1.98
PTBP1-208ENST00000585956 CYP27B1O15528 508 aa27.38■■□□□ 1.97
PTBP1-208ENST00000585956 AMIGO3Q86WK7 504 aa27.38■■□□□ 1.97
PTBP1-208ENST00000585956 TAF1LQ8IZX4 1826 aa27.38■■□□□ 1.97
PTBP1-208ENST00000585956 MSL1Q68DK7 614 aa27.37■■□□□ 1.97
PTBP1-208ENST00000585956 ITGB4P16144 1822 aa27.37■■□□□ 1.97
PTBP1-208ENST00000585956 FLT4P35916 1363 aa27.36■■□□□ 1.97
PTBP1-208ENST00000585956 NSD3Q9BZ95 1437 aa27.36■■□□□ 1.97
PTBP1-208ENST00000585956 GPR162Q16538 588 aa27.36■■□□□ 1.97
PTBP1-208ENST00000585956 RAPGEF4Q8WZA2 1011 aa27.36■■□□□ 1.97
PTBP1-208ENST00000585956 PKD1L3Q7Z443 1732 aa27.36■■□□□ 1.97
PTBP1-208ENST00000585956 SMG6Q86US8 1419 aaKnown RBP27.35■■□□□ 1.97
PTBP1-208ENST00000585956 POLD1P28340 1107 aa27.35■■□□□ 1.97
PTBP1-208ENST00000585956 SMIM5Q71RC9 77 aa27.35■■□□□ 1.97
PTBP1-208ENST00000585956 TATP17735 454 aaPredicted RBP27.34■■□□□ 1.97
PTBP1-208ENST00000585956 ANKRD26Q9UPS8 1709 aa27.33■■□□□ 1.97
PTBP1-208ENST00000585956 SLC24A1O60721 1099 aa27.33■■□□□ 1.97
PTBP1-208ENST00000585956 YBX3P16989 372 aaKnown RBP eCLIP27.33■■□□□ 1.972e-18■□□□□ 10.5
PTBP1-208ENST00000585956 PELP1Q8IZL8 1130 aaKnown RBP27.33■■□□□ 1.97
PTBP1-208ENST00000585956 CGNL1Q0VF96 1302 aa27.33■■□□□ 1.97
PTBP1-208ENST00000585956 NCAPD2Q15021 1401 aa27.33■■□□□ 1.96
PTBP1-208ENST00000585956 PALLDQ8WX93 1383 aa27.32■■□□□ 1.96
PTBP1-208ENST00000585956 MSH5O43196 834 aa27.31■■□□□ 1.96
PTBP1-208ENST00000585956 PCDH11XQ9BZA7 1347 aa27.31■■□□□ 1.96
PTBP1-208ENST00000585956 PCDH11YQ9BZA8 1340 aa27.31■■□□□ 1.96
PTBP1-208ENST00000585956 MPRIPQ6WCQ1 1025 aa27.3■■□□□ 1.96
PTBP1-208ENST00000585956 C4BP0C0L5 1744 aa27.29■■□□□ 1.96
PTBP1-208ENST00000585956 KIF24Q5T7B8 1368 aa27.28■■□□□ 1.96
PTBP1-208ENST00000585956 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
PTBP1-208ENST00000585956 CEP350Q5VT06 3117 aa27.27■■□□□ 1.96
PTBP1-208ENST00000585956 UBR3Q6ZT12 1888 aa27.25■■□□□ 1.95
PTBP1-208ENST00000585956 PPM1GO15355 546 aaPredicted RBP27.25■■□□□ 1.95
PTBP1-208ENST00000585956 TRIM26Q12899 539 aaPredicted RBP27.25■■□□□ 1.95
PTBP1-208ENST00000585956 PIGBQ92521 554 aa27.25■■□□□ 1.95
PTBP1-208ENST00000585956 C1QTNF8P60827 252 aa27.23■■□□□ 1.95
PTBP1-208ENST00000585956 EYA1Q99502 592 aa27.23■■□□□ 1.95
PTBP1-208ENST00000585956 CDCA8Q53HL2 280 aa27.21■■□□□ 1.95
PTBP1-208ENST00000585956 NKX1-1Q15270 411 aaPredicted RBP27.2■■□□□ 1.94
PTBP1-208ENST00000585956 POLKQ9UBT6 870 aa27.2■■□□□ 1.94
PTBP1-208ENST00000585956 WASHC2AQ641Q2 1341 aa27.19■■□□□ 1.94
PTBP1-208ENST00000585956 LINC00116Q8NCU8 138 aa27.19■■□□□ 1.94
PTBP1-208ENST00000585956 PHF14O94880 888 aa27.18■■□□□ 1.94
PTBP1-208ENST00000585956 SENP3-EIF4A1A0A087X0R7 540 aa27.17■■□□□ 1.94
PTBP1-208ENST00000585956 ITPK1Q13572 414 aa27.16■■□□□ 1.94
PTBP1-208ENST00000585956 ASAP1Q9ULH1 1129 aa27.16■■□□□ 1.94
PTBP1-208ENST00000585956 TNNT2P45379 298 aaPredicted RBP27.14■■□□□ 1.94
PTBP1-208ENST00000585956 EIF4A2Q14240 407 aaKnown RBP27.14■■□□□ 1.94
PTBP1-208ENST00000585956 AK7Q96M32 723 aa27.14■■□□□ 1.94
PTBP1-208ENST00000585956 WWC3Q9ULE0 1092 aa27.14■■□□□ 1.94
PTBP1-208ENST00000585956 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.13■■□□□ 1.93
PTBP1-208ENST00000585956 LOC102724428A0A0B4J2F2 783 aa27.12■■□□□ 1.93
PTBP1-208ENST00000585956 PHKG2P15735 406 aa27.12■■□□□ 1.93
PTBP1-208ENST00000585956 SIK1P57059 783 aa27.12■■□□□ 1.93
PTBP1-208ENST00000585956 SMARCC1Q92922 1105 aaPredicted RBP27.12■■□□□ 1.93
PTBP1-208ENST00000585956 POLR3GLQ9BT43 218 aa27.12■■□□□ 1.93
PTBP1-208ENST00000585956 SPG7Q9UQ90 795 aa27.11■■□□□ 1.93
PTBP1-208ENST00000585956 CD2APQ9Y5K6 639 aa27.11■■□□□ 1.93
PTBP1-208ENST00000585956 ATG3Q9NT62 314 aa27.1■■□□□ 1.93
PTBP1-208ENST00000585956 GIGYF1O75420 1035 aaPredicted RBP27.09■■□□□ 1.93
PTBP1-208ENST00000585956 FLAD1Q8NFF5 587 aa27.09■■□□□ 1.93
PTBP1-208ENST00000585956 SLC4A9Q96Q91 983 aa27.09■■□□□ 1.93
PTBP1-208ENST00000585956 ATP10DQ9P241 1426 aa27.08■■□□□ 1.93
PTBP1-208ENST00000585956 GRIN3BO60391 1043 aa27.07■■□□□ 1.92
PTBP1-208ENST00000585956 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.07■■□□□ 1.92
PTBP1-208ENST00000585956 TMOD3Q9NYL9 352 aa27.07■■□□□ 1.92
PTBP1-208ENST00000585956 KDRP35968 1356 aa27.07■■□□□ 1.92
PTBP1-208ENST00000585956 IFNL2Q8IZJ0 200 aa27.05■■□□□ 1.92
PTBP1-208ENST00000585956 IGSF1Q8N6C5 1336 aa27.05■■□□□ 1.92
PTBP1-208ENST00000585956 KIAA1551Q9HCM1 1747 aa27.04■■□□□ 1.92
PTBP1-208ENST00000585956 GNPATO15228 680 aa27.04■■□□□ 1.92
PTBP1-208ENST00000585956 SSFA2P28290 1259 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms