RNA–Protein interactions for RNA: ENST00000585887.3

LSM14A-204, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 445 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-204ENST00000585887 DDX54Q8TDD1 881 aaKnown RBP22.86■■□□□ 1.25
LSM14A-204ENST00000585887 PLSCR1O15162 318 aa22.85■■□□□ 1.25
LSM14A-204ENST00000585887 NSD2O96028 1365 aa22.83■■□□□ 1.25
LSM14A-204ENST00000585887 PKD1L3Q7Z443 1732 aa22.82■■□□□ 1.24
LSM14A-204ENST00000585887 NBPF14Q5TI25 921 aa22.82■■□□□ 1.24
LSM14A-204ENST00000585887 RAPGEF4Q8WZA2 1011 aa22.82■■□□□ 1.24
LSM14A-204ENST00000585887 POLKQ9UBT6 870 aa22.82■■□□□ 1.24
LSM14A-204ENST00000585887 ZCRB1Q8TBF4 217 aaKnown RBP22.81■■□□□ 1.24
LSM14A-204ENST00000585887 WASHC2AQ641Q2 1341 aa22.81■■□□□ 1.24
LSM14A-204ENST00000585887 PROM2Q8N271 834 aa22.79■■□□□ 1.24
LSM14A-204ENST00000585887 NCAPD2Q15021 1401 aa22.79■■□□□ 1.24
LSM14A-204ENST00000585887 TATP17735 454 aaPredicted RBP22.78■■□□□ 1.24
LSM14A-204ENST00000585887 ANO8Q9HCE9 1232 aaPredicted RBP22.78■■□□□ 1.24
LSM14A-204ENST00000585887 TXNRD1Q16881 649 aa22.77■■□□□ 1.24
LSM14A-204ENST00000585887 KNSTRNQ9Y448 316 aa22.77■■□□□ 1.24
LSM14A-204ENST00000585887 CASZ1Q86V15 1759 aa22.76■■□□□ 1.23
LSM14A-204ENST00000585887 SRCAPQ6ZRS2 3230 aa22.76■■□□□ 1.23
LSM14A-204ENST00000585887 MORC1Q86VD1 984 aa22.76■■□□□ 1.23
LSM14A-204ENST00000585887 PAPPAQ13219 1627 aa22.75■■□□□ 1.23
LSM14A-204ENST00000585887 TOGARAM1Q9Y4F4 1720 aa22.75■■□□□ 1.23
LSM14A-204ENST00000585887 LY75O60449 1722 aa22.74■■□□□ 1.23
LSM14A-204ENST00000585887 ITGB4P16144 1822 aa22.74■■□□□ 1.23
LSM14A-204ENST00000585887 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
LSM14A-204ENST00000585887 EYA1Q99502 592 aa22.74■■□□□ 1.23
LSM14A-204ENST00000585887 PRIM1P49642 420 aaKnown RBP22.73■■□□□ 1.23
LSM14A-204ENST00000585887 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
LSM14A-204ENST00000585887 PCDH11XQ9BZA7 1347 aa22.73■■□□□ 1.23
LSM14A-204ENST00000585887 PCDH11YQ9BZA8 1340 aa22.73■■□□□ 1.23
LSM14A-204ENST00000585887 AMER1Q5JTC6 1135 aaPredicted RBP22.72■■□□□ 1.23
LSM14A-204ENST00000585887 CYP27B1O15528 508 aa22.68■■□□□ 1.22
LSM14A-204ENST00000585887 STK32BQ9NY57 414 aa22.68■■□□□ 1.22
LSM14A-204ENST00000585887 TUBGCP6Q96RT7 1819 aa22.68■■□□□ 1.22
LSM14A-204ENST00000585887 IGSF1Q8N6C5 1336 aa22.66■■□□□ 1.22
LSM14A-204ENST00000585887 PER1O15534 1290 aaPredicted RBP22.65■■□□□ 1.22
LSM14A-204ENST00000585887 PDGFDQ9GZP0 370 aaPredicted RBP22.65■■□□□ 1.22
LSM14A-204ENST00000585887 LRRC4BQ9NT99 713 aa22.65■■□□□ 1.22
LSM14A-204ENST00000585887 SPG7Q9UQ90 795 aa22.65■■□□□ 1.22
LSM14A-204ENST00000585887 SLC15A2Q16348 729 aa22.64■■□□□ 1.21
LSM14A-204ENST00000585887 CC2D1BQ5T0F9 858 aaKnown RBP22.64■■□□□ 1.21
LSM14A-204ENST00000585887 QSER1Q2KHR3 1735 aa22.64■■□□□ 1.21
LSM14A-204ENST00000585887 KCNQ4P56696 695 aa22.62■■□□□ 1.21
LSM14A-204ENST00000585887 C5P01031 1676 aa22.62■■□□□ 1.21
LSM14A-204ENST00000585887 CNGB1Q14028 1251 aaPredicted RBP22.61■■□□□ 1.21
LSM14A-204ENST00000585887 ZNF827Q17R98 1081 aa22.61■■□□□ 1.21
LSM14A-204ENST00000585887 SLC27A3Q5K4L6 730 aa22.61■■□□□ 1.21
LSM14A-204ENST00000585887 SPON1Q9HCB6 807 aa22.61■■□□□ 1.21
LSM14A-204ENST00000585887 TAF1LQ8IZX4 1826 aa22.61■■□□□ 1.21
LSM14A-204ENST00000585887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.6■■□□□ 1.211e-7■■■■■ 28.4
LSM14A-204ENST00000585887 MPRIPQ6WCQ1 1025 aa22.59■■□□□ 1.21
LSM14A-204ENST00000585887 AEBP1Q8IUX7 1158 aa22.59■■□□□ 1.21
LSM14A-204ENST00000585887 ZBTB7AO95365 584 aa22.58■■□□□ 1.21
LSM14A-204ENST00000585887 MTHFSP49914 203 aa22.58■■□□□ 1.21
LSM14A-204ENST00000585887 NKX1-1Q15270 411 aaPredicted RBP22.58■■□□□ 1.21
LSM14A-204ENST00000585887 PLEKHG2Q9H7P9 1386 aa22.58■■□□□ 1.21
LSM14A-204ENST00000585887 NPC1L1Q9UHC9 1359 aa22.58■■□□□ 1.21
LSM14A-204ENST00000585887 PHKG2P15735 406 aa22.57■■□□□ 1.2
LSM14A-204ENST00000585887 CCNL1Q9UK58 526 aaPredicted RBP22.57■■□□□ 1.2
LSM14A-204ENST00000585887 PALLDQ8WX93 1383 aa22.56■■□□□ 1.2
LSM14A-204ENST00000585887 IL13P35225 146 aa22.56■■□□□ 1.2
LSM14A-204ENST00000585887 IFNL2Q8IZJ0 200 aa22.56■■□□□ 1.2
LSM14A-204ENST00000585887 AKT1S1Q96B36 256 aa22.55■■□□□ 1.2
LSM14A-204ENST00000585887 VIRMAQ69YN4 1812 aaKnown RBP22.54■■□□□ 1.2
LSM14A-204ENST00000585887 SULT6B1Q6IMI4 303 aa22.54■■□□□ 1.2
LSM14A-204ENST00000585887 PPP1R1BQ9UD71 204 aaPredicted RBP22.54■■□□□ 1.2
LSM14A-204ENST00000585887 KDRP35968 1356 aa22.53■■□□□ 1.2
LSM14A-204ENST00000585887 PIGBQ92521 554 aa22.53■■□□□ 1.2
LSM14A-204ENST00000585887 ATF5Q9Y2D1 282 aaPredicted RBP22.53■■□□□ 1.2
LSM14A-204ENST00000585887 PLEKHO1Q53GL0 409 aaPredicted RBP22.52■■□□□ 1.2
LSM14A-204ENST00000585887 COL3A1P02461 1466 aaPredicted RBP22.52■■□□□ 1.2
LSM14A-204ENST00000585887 ZNF530Q6P9A1 599 aaPredicted RBP22.51■■□□□ 1.19
LSM14A-204ENST00000585887 TMOD3Q9NYL9 352 aa22.51■■□□□ 1.19
LSM14A-204ENST00000585887 SCN11AQ9UI33 1791 aa22.5■■□□□ 1.19
LSM14A-204ENST00000585887 MTFR1LQ9H019 292 aa22.5■■□□□ 1.19
LSM14A-204ENST00000585887 C4BP0C0L5 1744 aa22.5■■□□□ 1.19
LSM14A-204ENST00000585887 KDM6AO15550 1401 aaPredicted RBP22.49■■□□□ 1.19
LSM14A-204ENST00000585887 PTGER2P43116 358 aa22.49■■□□□ 1.19
LSM14A-204ENST00000585887 AMOTQ4VCS5 1084 aa22.49■■□□□ 1.19
LSM14A-204ENST00000585887 SMARCC1Q92922 1105 aaPredicted RBP22.49■■□□□ 1.19
LSM14A-204ENST00000585887 TFCP2L1Q9NZI6 479 aa22.49■■□□□ 1.19
LSM14A-204ENST00000585887 PNPLA7Q6ZV29 1317 aa22.49■■□□□ 1.19
LSM14A-204ENST00000585887 COL24A1Q17RW2 1714 aa22.48■■□□□ 1.19
LSM14A-204ENST00000585887 DIAPH1O60610 1272 aaKnown RBP22.47■■□□□ 1.19
LSM14A-204ENST00000585887 HMOX1P09601 288 aa22.47■■□□□ 1.19
LSM14A-204ENST00000585887 UBR3Q6ZT12 1888 aa22.47■■□□□ 1.19
LSM14A-204ENST00000585887 HSP90AB1P08238 724 aaKnown RBP22.46■■□□□ 1.19
LSM14A-204ENST00000585887 ASAP1Q9ULH1 1129 aa22.46■■□□□ 1.19
LSM14A-204ENST00000585887 C1orf141Q5JVX7 400 aa22.45■■□□□ 1.18
LSM14A-204ENST00000585887 DCAF5Q96JK2 942 aa22.45■■□□□ 1.18
LSM14A-204ENST00000585887 SGIP1Q9BQI5 828 aa22.43■■□□□ 1.18
LSM14A-204ENST00000585887 LOC102724428A0A0B4J2F2 783 aa22.42■■□□□ 1.18
LSM14A-204ENST00000585887 ERVV-2B6SEH9 535 aa22.42■■□□□ 1.18
LSM14A-204ENST00000585887 SIK1P57059 783 aa22.42■■□□□ 1.18
LSM14A-204ENST00000585887 ATG3Q9NT62 314 aa22.42■■□□□ 1.18
LSM14A-204ENST00000585887 ZNF831Q5JPB2 1677 aa22.41■■□□□ 1.18
LSM14A-204ENST00000585887 COL5A3P25940 1745 aaPredicted RBP22.4■■□□□ 1.18
LSM14A-204ENST00000585887 MSH5O43196 834 aa22.4■■□□□ 1.18
LSM14A-204ENST00000585887 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
LSM14A-204ENST00000585887 U2SURPO15042 1029 aaKnown RBP22.39■■□□□ 1.17
LSM14A-204ENST00000585887 CABP4P57796 275 aa22.39■■□□□ 1.17
LSM14A-204ENST00000585887 COL23A1Q86Y22 540 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms