RNA–Protein interactions for RNA: ENST00000585815.5

PRKAR1A-208, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, human

TSL 5

Gene PRKAR1A, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAR1A-208	ENST00000585815	SPG7	Q9UQ90	795 aa		11.32	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	PCDH11X	Q9BZA7	1347 aa		11.32	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	PCDH11Y	Q9BZA8	1340 aa		11.32	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	MTHFS	P49914	203 aa		11.31	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	EN1	Q05925	392 aa	Predicted RBP	11.31	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	CNGB1	Q14028	1251 aa	Predicted RBP	11.31	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	CFAP53	Q96M91	514 aa		11.31	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	IGSF1	Q8N6C5	1336 aa		11.31	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	KAT6B	Q8WYB5	2073 aa		11.31	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	RGPD3	A6NKT7	1758 aa	Predicted RBP	11.3	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	RGPD4	Q7Z3J3	1758 aa		11.3	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	NHS	Q6T4R5	1651 aa		11.3	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	PLSCR1	O15162	318 aa		11.29	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	DIAPH1	O60610	1272 aa	Known RBP	11.29	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	PKD1L3	Q7Z443	1732 aa		11.29	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	IL13	P35225	146 aa		11.28	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	EZH2	Q15910	746 aa	Known RBP	11.28	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	AMOT	Q4VCS5	1084 aa		11.28	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.28	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	NBPF14	Q5TI25	921 aa		11.28	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	ACSBG1	Q96GR2	724 aa		11.28	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	CAMKK2	Q96RR4	588 aa		11.28	□□□□□ -0.6
PRKAR1A-208	ENST00000585815	SHANK3	Q9BYB0	1731 aa		11.27	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	HSP90AB1	P08238	724 aa	Known RBP	11.27	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	HMGB2	P26583	209 aa	Known RBP	11.27	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	IFNL2	Q8IZJ0	200 aa		11.27	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	NUDC	Q9Y266	331 aa		11.27	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	DDX10	Q13206	875 aa	Known RBP	11.26	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	SULT6B1	Q6IMI4	303 aa		11.26	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	SYTL4	Q96C24	671 aa	Predicted RBP	11.26	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	RREB1	Q92766	1687 aa		11.26	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	KCNQ2	O43526	872 aa		11.25	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	PPP2R1A	P30153	589 aa		11.25	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	RALBP1	Q15311	655 aa		11.25	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	DOT1L	Q8TEK3	1739 aa		11.25	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	KDR	P35968	1356 aa		11.25	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	BTAF1	O14981	1849 aa		11.24	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	CYP27B1	O15528	508 aa		11.24	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	PRIM1	P49642	420 aa	Known RBP	11.24	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	NKX1-1	Q15270	411 aa	Predicted RBP	11.24	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	C1orf141	Q5JVX7	400 aa		11.24	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	U2SURP	O15042	1029 aa	Known RBP	11.23	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	PHKG2	P15735	406 aa		11.23	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.23	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	NUP188	Q5SRE5	1749 aa		11.23	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.22	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	COL3A1	P02461	1466 aa	Predicted RBP	11.22	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	TXNRD1	Q16881	649 aa		11.22	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	SLC27A3	Q5K4L6	730 aa		11.22	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	AEBP1	Q8IUX7	1158 aa		11.22	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	SMARCC1	Q92922	1105 aa	Predicted RBP	11.22	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	HMOX1	P09601	288 aa		11.21	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	PTF1A	Q7RTS3	328 aa		11.21	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	DCAF5	Q96JK2	942 aa		11.21	□□□□□ -0.61
PRKAR1A-208	ENST00000585815	ERVV-2	B6SEH9	535 aa		11.2	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	NEFM	P07197	916 aa		11.2	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	AKAP4	Q5JQC9	854 aa		11.2	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	MPRIP	Q6WCQ1	1025 aa		11.2	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	STK32B	Q9NY57	414 aa		11.2	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	TMOD3	Q9NYL9	352 aa		11.2	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	ITGB4	P16144	1822 aa		11.19	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	R3HDM1	Q15032	1099 aa	Known RBP	11.19	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	GAS2L2	Q8NHY3	880 aa		11.19	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	PNN	Q9H307	717 aa	Known RBP	11.19	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	TOGARAM1	Q9Y4F4	1720 aa		11.18	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.18	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.18	□□□□□ -0.62	8e-6	■□□□□ 10.9
PRKAR1A-208	ENST00000585815	PROM2	Q8N271	834 aa		11.18	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	LY75	O60449	1722 aa		11.18	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	PSD	A5PKW4	1024 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	FCHSD2	O94868	740 aa		11.17	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	CABP4	P57796	275 aa		11.17	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	CCNL1	Q9UK58	526 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	PALLD	Q8WX93	1383 aa		11.16	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	SLC15A2	Q16348	729 aa		11.16	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	PIGB	Q92521	554 aa		11.16	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	PRKAR2B	P31323	418 aa		11.15	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	MTHFSD	Q2M296	383 aa	Known RBP	11.15	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	RSPH6A	Q9H0K4	717 aa		11.15	□□□□□ -0.62
PRKAR1A-208	ENST00000585815	SCN11A	Q9UI33	1791 aa		11.14	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	GNAT3	A8MTJ3	354 aa		11.14	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	KDM6A	O15550	1401 aa	Predicted RBP	11.14	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	PAPPA	Q13219	1627 aa		11.13	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	RNMT	O43148	476 aa	Known RBP	11.13	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.13	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	LRRC4B	Q9NT99	713 aa		11.13	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	MAP3K5	Q99683	1374 aa		11.13	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	MAPK8IP3	Q9UPT6	1336 aa		11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	LOC102724428	A0A0B4J2F2	783 aa		11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	SIK1	P57059	783 aa		11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	TEF	Q10587	303 aa		11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	WDR43	Q15061	677 aa	Known RBP eCLIP	11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	NFATC2IP	Q8NCF5	419 aa		11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	FLAD1	Q8NFF5	587 aa		11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	RTF1	Q92541	710 aa	Known RBP	11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	SLC52A2	Q9HAB3	445 aa		11.12	□□□□□ -0.63
PRKAR1A-208	ENST00000585815	ATG3	Q9NT62	314 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms