RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 HMGB2P26583 209 aaKnown RBP20.93■□□□□ 0.94
VAPA-209ENST00000585042 RRS1Q15050 365 aaKnown RBP20.93■□□□□ 0.94
VAPA-209ENST00000585042 NBPF6Q5VWK0 638 aa20.93■□□□□ 0.94
VAPA-209ENST00000585042 NBPF4Q96M43 638 aa20.93■□□□□ 0.94
VAPA-209ENST00000585042 MYOM1P52179 1685 aa20.93■□□□□ 0.94
VAPA-209ENST00000585042 ZNF827Q17R98 1081 aa20.92■□□□□ 0.94
VAPA-209ENST00000585042 ARXQ96QS3 562 aa20.92■□□□□ 0.94
VAPA-209ENST00000585042 FHDC1Q9C0D6 1143 aaPredicted RBP20.92■□□□□ 0.94
VAPA-209ENST00000585042 SMG6Q86US8 1419 aaKnown RBP20.92■□□□□ 0.94
VAPA-209ENST00000585042 INSRP06213 1382 aa20.91■□□□□ 0.94
VAPA-209ENST00000585042 RAPGEF4Q8WZA2 1011 aa20.91■□□□□ 0.94
VAPA-209ENST00000585042 SYTL4Q96C24 671 aaPredicted RBP20.91■□□□□ 0.94
VAPA-209ENST00000585042 MAP3K5Q99683 1374 aa20.9■□□□□ 0.94
VAPA-209ENST00000585042 CLSPNQ9HAW4 1339 aa20.89■□□□□ 0.93
VAPA-209ENST00000585042 RGPD2P0DJD1 1756 aa20.89■□□□□ 0.93
VAPA-209ENST00000585042 QSER1Q2KHR3 1735 aa20.89■□□□□ 0.93
VAPA-209ENST00000585042 MEGF6O75095 1541 aa20.88■□□□□ 0.93
VAPA-209ENST00000585042 FLT4P35916 1363 aa20.88■□□□□ 0.93
VAPA-209ENST00000585042 TATP17735 454 aaPredicted RBP20.88■□□□□ 0.93
VAPA-209ENST00000585042 NSD2O96028 1365 aa20.87■□□□□ 0.93
VAPA-209ENST00000585042 TFCP2L1Q9NZI6 479 aa20.87■□□□□ 0.93
VAPA-209ENST00000585042 HSP90AB2PQ58FF8 381 aa20.86■□□□□ 0.93
VAPA-209ENST00000585042 CARD14Q9BXL6 1004 aa20.86■□□□□ 0.93
VAPA-209ENST00000585042 SHANK3Q9BYB0 1731 aa20.86■□□□□ 0.93
VAPA-209ENST00000585042 LY75O60449 1722 aa20.85■□□□□ 0.93
VAPA-209ENST00000585042 DOT1LQ8TEK3 1739 aa20.84■□□□□ 0.93
VAPA-209ENST00000585042 PNPLA7Q6ZV29 1317 aa20.84■□□□□ 0.93
VAPA-209ENST00000585042 PCDH11XQ9BZA7 1347 aa20.84■□□□□ 0.93
VAPA-209ENST00000585042 PCDH11YQ9BZA8 1340 aa20.84■□□□□ 0.93
VAPA-209ENST00000585042 KIF20BQ96Q89 1820 aa20.84■□□□□ 0.93
VAPA-209ENST00000585042 POLD1P28340 1107 aa20.84■□□□□ 0.93
VAPA-209ENST00000585042 USHBP1Q8N6Y0 703 aa20.83■□□□□ 0.93
VAPA-209ENST00000585042 CCNL1Q9UK58 526 aaPredicted RBP20.83■□□□□ 0.93
VAPA-209ENST00000585042 COL24A1Q17RW2 1714 aa20.82■□□□□ 0.92
VAPA-209ENST00000585042 KCNQ4P56696 695 aa20.8■□□□□ 0.92
VAPA-209ENST00000585042 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
VAPA-209ENST00000585042 NSD3Q9BZ95 1437 aa20.79■□□□□ 0.92
VAPA-209ENST00000585042 FLAD1Q8NFF5 587 aa20.78■□□□□ 0.92
VAPA-209ENST00000585042 EMILIN1Q9Y6C2 1016 aa20.78■□□□□ 0.92
VAPA-209ENST00000585042 NCAPD2Q15021 1401 aa20.78■□□□□ 0.92
VAPA-209ENST00000585042 CYP27B1O15528 508 aa20.77■□□□□ 0.92
VAPA-209ENST00000585042 NKX1-1Q15270 411 aaPredicted RBP20.77■□□□□ 0.92
VAPA-209ENST00000585042 SMARCC1Q92922 1105 aaPredicted RBP20.77■□□□□ 0.92
VAPA-209ENST00000585042 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.77■□□□□ 0.92
VAPA-209ENST00000585042 SPG7Q9UQ90 795 aa20.76■□□□□ 0.91
VAPA-209ENST00000585042 CHD4Q14839 1912 aa20.76■□□□□ 0.91
VAPA-209ENST00000585042 ZNF784Q8NCA9 323 aaPredicted RBP20.75■□□□□ 0.91
VAPA-209ENST00000585042 TUBGCP6Q96RT7 1819 aa20.74■□□□□ 0.91
VAPA-209ENST00000585042 PPM1GO15355 546 aaPredicted RBP20.74■□□□□ 0.91
VAPA-209ENST00000585042 GPR162Q16538 588 aa20.74■□□□□ 0.91
VAPA-209ENST00000585042 MPRIPQ6WCQ1 1025 aa20.74■□□□□ 0.91
VAPA-209ENST00000585042 COL23A1Q86Y22 540 aaPredicted RBP20.74■□□□□ 0.91
VAPA-209ENST00000585042 POLKQ9UBT6 870 aa20.73■□□□□ 0.91
VAPA-209ENST00000585042 ANKRD26Q9UPS8 1709 aa20.73■□□□□ 0.91
VAPA-209ENST00000585042 PALLDQ8WX93 1383 aa20.72■□□□□ 0.91
VAPA-209ENST00000585042 UTRNP46939 3433 aa20.72■□□□□ 0.91
VAPA-209ENST00000585042 MSH5O43196 834 aa20.72■□□□□ 0.91
VAPA-209ENST00000585042 EYA1Q99502 592 aa20.72■□□□□ 0.91
VAPA-209ENST00000585042 PKD1L3Q7Z443 1732 aa20.72■□□□□ 0.91
VAPA-209ENST00000585042 PLEKHG2Q9H7P9 1386 aa20.72■□□□□ 0.91
VAPA-209ENST00000585042 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
VAPA-209ENST00000585042 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.9
VAPA-209ENST00000585042 PIGBQ92521 554 aa20.69■□□□□ 0.9
VAPA-209ENST00000585042 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
VAPA-209ENST00000585042 C5P01031 1676 aa20.69■□□□□ 0.9
VAPA-209ENST00000585042 IFNL2Q8IZJ0 200 aa20.68■□□□□ 0.9
VAPA-209ENST00000585042 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
VAPA-209ENST00000585042 ITGB4P16144 1822 aa20.68■□□□□ 0.9
VAPA-209ENST00000585042 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
VAPA-209ENST00000585042 GRIN3BO60391 1043 aa20.67■□□□□ 0.9
VAPA-209ENST00000585042 PIAS4Q8N2W9 510 aaPredicted RBP20.66■□□□□ 0.9
VAPA-209ENST00000585042 CD2APQ9Y5K6 639 aa20.66■□□□□ 0.9
VAPA-209ENST00000585042 NLGN2Q8NFZ4 835 aa20.65■□□□□ 0.9
VAPA-209ENST00000585042 AK7Q96M32 723 aa20.65■□□□□ 0.9
VAPA-209ENST00000585042 TMOD3Q9NYL9 352 aa20.65■□□□□ 0.9
VAPA-209ENST00000585042 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.9
VAPA-209ENST00000585042 LOC102724428A0A0B4J2F2 783 aa20.64■□□□□ 0.89
VAPA-209ENST00000585042 PHKG2P15735 406 aa20.64■□□□□ 0.89
VAPA-209ENST00000585042 SIK1P57059 783 aa20.64■□□□□ 0.89
VAPA-209ENST00000585042 EIF4A2Q14240 407 aaKnown RBP20.64■□□□□ 0.89
VAPA-209ENST00000585042 POLR3GLQ9BT43 218 aa20.63■□□□□ 0.89
VAPA-209ENST00000585042 C4BP0C0L5 1744 aa20.62■□□□□ 0.89
VAPA-209ENST00000585042 HSPA5P11021 654 aaKnown RBP20.62■□□□□ 0.89
VAPA-209ENST00000585042 SSFA2P28290 1259 aa20.62■□□□□ 0.89
VAPA-209ENST00000585042 PELP1Q8IZL8 1130 aaKnown RBP20.62■□□□□ 0.89
VAPA-209ENST00000585042 PANK3Q9H999 370 aa20.62■□□□□ 0.89
VAPA-209ENST00000585042 MSL1Q68DK7 614 aa20.61■□□□□ 0.89
VAPA-209ENST00000585042 IGSF1Q8N6C5 1336 aa20.6■□□□□ 0.89
VAPA-209ENST00000585042 ERVV-2B6SEH9 535 aa20.6■□□□□ 0.89
VAPA-209ENST00000585042 HSP90AB1P08238 724 aaKnown RBP20.6■□□□□ 0.89
VAPA-209ENST00000585042 TNNT2P45379 298 aaPredicted RBP20.6■□□□□ 0.89
VAPA-209ENST00000585042 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
VAPA-209ENST00000585042 ASAP1Q9ULH1 1129 aa20.59■□□□□ 0.89
VAPA-209ENST00000585042 AMOTQ4VCS5 1084 aa20.58■□□□□ 0.89
VAPA-209ENST00000585042 PLEKHO1Q53GL0 409 aaPredicted RBP20.58■□□□□ 0.89
VAPA-209ENST00000585042 DCAF5Q96JK2 942 aa20.58■□□□□ 0.89
VAPA-209ENST00000585042 UBR3Q6ZT12 1888 aa20.58■□□□□ 0.88
VAPA-209ENST00000585042 YBX3P16989 372 aaKnown RBP eCLIP20.57■□□□□ 0.883e-29■■■■□ 25.6
VAPA-209ENST00000585042 ATP6V1AP38606 617 aa20.57■□□□□ 0.88
VAPA-209ENST00000585042 C1QTNF8P60827 252 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms