RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 DOT1LQ8TEK3 1739 aa14.57□□□□□ -0.08
GGA3-219ENST00000584550 USP31Q70CQ4 1352 aa14.57□□□□□ -0.08
GGA3-219ENST00000584550 ANKRD36BQ8N2N9 1353 aa14.57□□□□□ -0.08
GGA3-219ENST00000584550 TMC1Q8TDI8 760 aa14.56□□□□□ -0.08
GGA3-219ENST00000584550 NSD2O96028 1365 aa14.56□□□□□ -0.08
GGA3-219ENST00000584550 L3MBTL2Q969R5 705 aa14.54□□□□□ -0.08
GGA3-219ENST00000584550 CD2APQ9Y5K6 639 aa14.54□□□□□ -0.08
GGA3-219ENST00000584550 ADCY9O60503 1353 aa14.53□□□□□ -0.08
GGA3-219ENST00000584550 USP47Q96K76 1375 aa14.53□□□□□ -0.08
GGA3-219ENST00000584550 SBNO2Q9Y2G9 1366 aa14.53□□□□□ -0.08
GGA3-219ENST00000584550 ZCRB1Q8TBF4 217 aaKnown RBP14.53□□□□□ -0.08
GGA3-219ENST00000584550 IP6K1Q92551 441 aa14.53□□□□□ -0.08
GGA3-219ENST00000584550 ROCK2O75116 1388 aaKnown RBP14.52□□□□□ -0.08
GGA3-219ENST00000584550 SLC12A5Q9H2X9 1139 aa14.52□□□□□ -0.09
GGA3-219ENST00000584550 CD163L1Q9NR16 1453 aa14.51□□□□□ -0.09
GGA3-219ENST00000584550 KIF3CO14782 793 aa14.51□□□□□ -0.09
GGA3-219ENST00000584550 FBLN1P23142 703 aa14.51□□□□□ -0.09
GGA3-219ENST00000584550 SMIM5Q71RC9 77 aa14.51□□□□□ -0.09
GGA3-219ENST00000584550 HDGFL2Q7Z4V5 671 aaPredicted RBP14.51□□□□□ -0.09
GGA3-219ENST00000584550 RGPD2P0DJD1 1756 aa14.51□□□□□ -0.09
GGA3-219ENST00000584550 USP54Q70EL1 1684 aa14.51□□□□□ -0.09
GGA3-219ENST00000584550 IGSF1Q8N6C5 1336 aa14.5□□□□□ -0.09
GGA3-219ENST00000584550 C5P01031 1676 aa14.49□□□□□ -0.09
GGA3-219ENST00000584550 PCGF6Q9BYE7 350 aa14.49□□□□□ -0.09
GGA3-219ENST00000584550 MEGF6O75095 1541 aa14.48□□□□□ -0.09
GGA3-219ENST00000584550 PHF14O94880 888 aa14.48□□□□□ -0.09
GGA3-219ENST00000584550 APLP1P51693 650 aa14.48□□□□□ -0.09
GGA3-219ENST00000584550 AMIGO3Q86WK7 504 aa14.48□□□□□ -0.09
GGA3-219ENST00000584550 USHBP1Q8N6Y0 703 aa14.48□□□□□ -0.09
GGA3-219ENST00000584550 FAM208AQ9UK61 1670 aaKnown RBP14.48□□□□□ -0.09
GGA3-219ENST00000584550 CAPN15O75808 1086 aa14.47□□□□□ -0.09
GGA3-219ENST00000584550 HOXC9P31274 260 aa14.47□□□□□ -0.09
GGA3-219ENST00000584550 AMPHP49418 695 aa14.47□□□□□ -0.09
GGA3-219ENST00000584550 SIN3AQ96ST3 1273 aa14.47□□□□□ -0.09
GGA3-219ENST00000584550 MAP3K19Q56UN5 1328 aa14.46□□□□□ -0.09
GGA3-219ENST00000584550 NEUROD1Q13562 356 aa14.46□□□□□ -0.09
GGA3-219ENST00000584550 MPRIPQ6WCQ1 1025 aa14.46□□□□□ -0.09
GGA3-219ENST00000584550 DNAJC5GQ8N7S2 189 aa14.46□□□□□ -0.09
GGA3-219ENST00000584550 FLAD1Q8NFF5 587 aa14.46□□□□□ -0.09
GGA3-219ENST00000584550 EDC4Q6P2E9 1401 aaKnown RBP14.46□□□□□ -0.09
GGA3-219ENST00000584550 NBPF6Q5VWK0 638 aa14.45□□□□□ -0.1
GGA3-219ENST00000584550 AK7Q96M32 723 aa14.45□□□□□ -0.1
GGA3-219ENST00000584550 NBPF4Q96M43 638 aa14.45□□□□□ -0.1
GGA3-219ENST00000584550 TERF2IPQ9NYB0 399 aa14.45□□□□□ -0.1
GGA3-219ENST00000584550 TAF1LQ8IZX4 1826 aa14.45□□□□□ -0.1
GGA3-219ENST00000584550 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
GGA3-219ENST00000584550 PALLDQ8WX93 1383 aa14.44□□□□□ -0.1
GGA3-219ENST00000584550 COG3Q96JB2 828 aa14.43□□□□□ -0.1
GGA3-219ENST00000584550 C4BP0C0L5 1744 aa14.42□□□□□ -0.1
GGA3-219ENST00000584550 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.42□□□□□ -0.1
GGA3-219ENST00000584550 TOMM70O94826 608 aa14.42□□□□□ -0.1
GGA3-219ENST00000584550 HTRA3P83110 453 aa14.42□□□□□ -0.1
GGA3-219ENST00000584550 COL13A1Q5TAT6 717 aaPredicted RBP14.42□□□□□ -0.1
GGA3-219ENST00000584550 RAPGEF4Q8WZA2 1011 aa14.42□□□□□ -0.1
GGA3-219ENST00000584550 RRS1Q15050 365 aaKnown RBP14.41□□□□□ -0.1
GGA3-219ENST00000584550 NMRK2Q9NPI5 230 aa14.41□□□□□ -0.1
GGA3-219ENST00000584550 TOGARAM1Q9Y4F4 1720 aa14.41□□□□□ -0.1
GGA3-219ENST00000584550 TATP17735 454 aaPredicted RBP14.4□□□□□ -0.1
GGA3-219ENST00000584550 PCNTO95613 3336 aa14.39□□□□□ -0.11
GGA3-219ENST00000584550 ARHGAP27Q6ZUM4 889 aa14.39□□□□□ -0.11
GGA3-219ENST00000584550 CARD11Q9BXL7 1154 aa14.39□□□□□ -0.11
GGA3-219ENST00000584550 BCS1LQ9Y276 419 aa14.39□□□□□ -0.11
GGA3-219ENST00000584550 UBR3Q6ZT12 1888 aa14.39□□□□□ -0.11
GGA3-219ENST00000584550 A0A0G2JLW4 131 aa14.38□□□□□ -0.11
GGA3-219ENST00000584550 HMGB2P26583 209 aaKnown RBP14.38□□□□□ -0.11
GGA3-219ENST00000584550 CGNL1Q0VF96 1302 aa14.38□□□□□ -0.11
GGA3-219ENST00000584550 PCDH11XQ9BZA7 1347 aa14.38□□□□□ -0.11
GGA3-219ENST00000584550 PCDH11YQ9BZA8 1340 aa14.38□□□□□ -0.11
GGA3-219ENST00000584550 N4BP2Q86UW6 1770 aaPredicted RBP14.37□□□□□ -0.11
GGA3-219ENST00000584550 ITGB4P16144 1822 aa14.37□□□□□ -0.11
GGA3-219ENST00000584550 CYP27B1O15528 508 aa14.37□□□□□ -0.11
GGA3-219ENST00000584550 LINC00116Q8NCU8 138 aa14.37□□□□□ -0.11
GGA3-219ENST00000584550 PIGBQ92521 554 aa14.37□□□□□ -0.11
GGA3-219ENST00000584550 SMARCC1Q92922 1105 aaPredicted RBP14.37□□□□□ -0.11
GGA3-219ENST00000584550 WDR90Q96KV7 1748 aa14.37□□□□□ -0.11
GGA3-219ENST00000584550 MMP10P09238 476 aa14.36□□□□□ -0.11
GGA3-219ENST00000584550 GNPATO15228 680 aa14.35□□□□□ -0.11
GGA3-219ENST00000584550 SSFA2P28290 1259 aa14.35□□□□□ -0.11
GGA3-219ENST00000584550 HSP90AB2PQ58FF8 381 aa14.35□□□□□ -0.11
GGA3-219ENST00000584550 C16orf71Q8IYS4 520 aaPredicted RBP14.35□□□□□ -0.11
GGA3-219ENST00000584550 KLRG1Q96E93 195 aa14.35□□□□□ -0.11
GGA3-219ENST00000584550 CICQ96RK0 1608 aaPredicted RBP14.34□□□□□ -0.11
GGA3-219ENST00000584550 SMG6Q86US8 1419 aaKnown RBP14.34□□□□□ -0.11
GGA3-219ENST00000584550 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
GGA3-219ENST00000584550 LOC102724428A0A0B4J2F2 783 aa14.34□□□□□ -0.11
GGA3-219ENST00000584550 SIK1P57059 783 aa14.34□□□□□ -0.11
GGA3-219ENST00000584550 TNS4Q8IZW8 715 aa14.34□□□□□ -0.11
GGA3-219ENST00000584550 GGNBP2Q9H3C7 697 aa14.34□□□□□ -0.11
GGA3-219ENST00000584550 ITPK1Q13572 414 aa14.33□□□□□ -0.12
GGA3-219ENST00000584550 RTL1A6NKG5 1358 aa14.33□□□□□ -0.12
GGA3-219ENST00000584550 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
GGA3-219ENST00000584550 FCHSD2O94868 740 aa14.32□□□□□ -0.12
GGA3-219ENST00000584550 DPEP1P16444 411 aa14.32□□□□□ -0.12
GGA3-219ENST00000584550 ATP6V1AP38606 617 aa14.32□□□□□ -0.12
GGA3-219ENST00000584550 TGFB2P61812 414 aa14.32□□□□□ -0.12
GGA3-219ENST00000584550 RBM46Q8TBY0 533 aaKnown RBP14.32□□□□□ -0.12
GGA3-219ENST00000584550 ASAP1Q9ULH1 1129 aa14.32□□□□□ -0.12
GGA3-219ENST00000584550 KIAA1551Q9HCM1 1747 aa14.32□□□□□ -0.12
GGA3-219ENST00000584550 C9orf131Q5VYM1 1079 aa14.31□□□□□ -0.12
GGA3-219ENST00000584550 JMYQ8N9B5 988 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms