RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 CLIP2Q9UDT6 1046 aa12.21□□□□□ -0.45
CDH8-211ENST00000584337 CEP83Q9Y592 693 aa12.21□□□□□ -0.45
CDH8-211ENST00000584337 KIF14Q15058 1648 aa12.21□□□□□ -0.45
CDH8-211ENST00000584337 PDS5BQ9NTI5 1447 aa12.21□□□□□ -0.46
CDH8-211ENST00000584337 ERC2O15083 957 aa12.21□□□□□ -0.46
CDH8-211ENST00000584337 NEMFO60524 1076 aa12.21□□□□□ -0.46
CDH8-211ENST00000584337 TSR2Q969E8 191 aaKnown RBP12.21□□□□□ -0.46
CDH8-211ENST00000584337 RTEL1-TNFRSF6BF6WH68 1400 aa12.21□□□□□ -0.46
CDH8-211ENST00000584337 CYP2E1P05181 493 aaPredicted RBP12.2□□□□□ -0.46
CDH8-211ENST00000584337 C1orf115Q9H7X2 142 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 NPC1L1Q9UHC9 1359 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
CDH8-211ENST00000584337 FBXO38Q6PIJ6 1188 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 CCDC172P0C7W6 258 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 MAP3K11Q16584 847 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 ANKRD20A12PQ8NF67 263 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 FAM200AQ8TCP9 573 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 TPM1P09493 284 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 DNAAF4Q8WXU2 420 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 SSH1Q8WYL5 1049 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 SMC3Q9UQE7 1217 aa12.2□□□□□ -0.46
CDH8-211ENST00000584337 CCAR2Q8N163 923 aaKnown RBP12.19□□□□□ -0.46
CDH8-211ENST00000584337 ST7Q9NRC1 585 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 HSP90B1P14625 803 aaKnown RBP12.19□□□□□ -0.46
CDH8-211ENST00000584337 GUCY2CP25092 1073 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 ARHGAP29Q52LW3 1261 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 HSP90B2PQ58FF3 399 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 RRP15Q9Y3B9 282 aaKnown RBP12.19□□□□□ -0.46
CDH8-211ENST00000584337 RAD54L2Q9Y4B4 1467 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 EPRSP07814 1512 aaKnown RBP12.19□□□□□ -0.46
CDH8-211ENST00000584337 MNAT1P51948 309 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 LMOD2Q6P5Q4 547 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
CDH8-211ENST00000584337 BRD1O95696 1058 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 USP26Q9BXU7 913 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 LRMPQ12912 555 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.18□□□□□ -0.46
CDH8-211ENST00000584337 TRIM66O15016 1216 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 MAP2K2P36507 400 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 ATP6V1AP38606 617 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 GIMAP7Q8NHV1 300 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 PPM1EQ8WY54 764 aa12.18□□□□□ -0.46
CDH8-211ENST00000584337 TNMDQ9H2S6 317 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 MMP14P50281 582 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 GOLGA5Q8TBA6 731 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 TESK2Q96S53 571 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 TCOF1Q13428 1488 aaKnown RBP12.17□□□□□ -0.46
CDH8-211ENST00000584337 CT47A1Q5JQC4 288 aaPredicted RBP12.17□□□□□ -0.46
CDH8-211ENST00000584337 PIK3C2GO75747 1445 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 ANKRD50Q9ULJ7 1429 aa12.17□□□□□ -0.46
CDH8-211ENST00000584337 POLA1P09884 1462 aaPredicted RBP12.16□□□□□ -0.46
CDH8-211ENST00000584337 KIF3BO15066 747 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 SKILP12757 684 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 RDXP35241 583 aaKnown RBP12.16□□□□□ -0.46
CDH8-211ENST00000584337 SLFNL1Q499Z3 407 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 VPS37CA5D8V6 355 aaPredicted RBP12.16□□□□□ -0.46
CDH8-211ENST00000584337 SNW1Q13573 536 aaKnown RBP12.16□□□□□ -0.46
CDH8-211ENST00000584337 TTLL5Q6EMB2 1281 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 CNPY2Q9Y2B0 182 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 ABCC5O15440 1437 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 SMARCA5O60264 1052 aaPredicted RBP12.16□□□□□ -0.46
CDH8-211ENST00000584337 MUM1L1Q5H9M0 696 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 DNAJC5BQ9UF47 199 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 GCC2Q8IWJ2 1684 aa12.16□□□□□ -0.46
CDH8-211ENST00000584337 GOLIM4O00461 696 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 GYS2P54840 703 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 E2F4Q16254 413 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 UGGT2Q9NYU1 1516 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 CASTP20810 708 aaKnown RBP12.15□□□□□ -0.46
CDH8-211ENST00000584337 ZSCAN25Q6NSZ9 544 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 KCNF1Q9H3M0 494 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 ZDHHC9Q9Y397 364 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 KDM6BO15054 1643 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 OAS2P29728 719 aaKnown RBP12.15□□□□□ -0.46
CDH8-211ENST00000584337 SART3Q15020 963 aaKnown RBP12.15□□□□□ -0.46
CDH8-211ENST00000584337 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
CDH8-211ENST00000584337 FANCD2Q9BXW9 1451 aa12.14□□□□□ -0.47
CDH8-211ENST00000584337 CAMK4Q16566 473 aa12.14□□□□□ -0.47
CDH8-211ENST00000584337 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.14□□□□□ -0.47
CDH8-211ENST00000584337 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
CDH8-211ENST00000584337 BICD2Q8TD16 824 aa12.14□□□□□ -0.47
CDH8-211ENST00000584337 EIF3JO75822 258 aaKnown RBP12.14□□□□□ -0.47
CDH8-211ENST00000584337 BRPF1P55201 1214 aaPredicted RBP12.14□□□□□ -0.47
CDH8-211ENST00000584337 INTS4Q96HW7 963 aaKnown RBP12.14□□□□□ -0.47
CDH8-211ENST00000584337 FAM107BQ9H098 131 aa12.14□□□□□ -0.47
CDH8-211ENST00000584337 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
CDH8-211ENST00000584337 PNMA6AP0CW24 399 aaPredicted RBP12.13□□□□□ -0.47
CDH8-211ENST00000584337 COL17A1Q9UMD9 1497 aaPredicted RBP12.13□□□□□ -0.47
CDH8-211ENST00000584337 CCP110O43303 1012 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.13□□□□□ -0.47
CDH8-211ENST00000584337 LUZP1Q86V48 1076 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 ACBD3Q9H3P7 528 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 ARFGAP3Q9NP61 516 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 H0YHG0 523 aa12.13□□□□□ -0.47
CDH8-211ENST00000584337 NOP2P46087 812 aaKnown RBP12.13□□□□□ -0.47
CDH8-211ENST00000584337 HSP90AB3PQ58FF7 597 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms