RNA–Protein interactions for RNA: ENST00000583805.1

CRLF3-205, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-205ENST00000583805 TNS2Q63HR2 1409 aa12.27□□□□□ -0.45
CRLF3-205ENST00000583805 QSER1Q2KHR3 1735 aa12.26□□□□□ -0.45
CRLF3-205ENST00000583805 CARD10Q9BWT7 1032 aa12.26□□□□□ -0.45
CRLF3-205ENST00000583805 RYDENQ9NUL5 291 aaKnown RBP12.26□□□□□ -0.45
CRLF3-205ENST00000583805 TERF2IPQ9NYB0 399 aa12.26□□□□□ -0.45
CRLF3-205ENST00000583805 R3HDM1Q15032 1099 aaKnown RBP12.25□□□□□ -0.45
CRLF3-205ENST00000583805 NBPF14Q5TI25 921 aa12.25□□□□□ -0.45
CRLF3-205ENST00000583805 A0A1W2PP64 1363 aa12.24□□□□□ -0.45
CRLF3-205ENST00000583805 CSB-PGBD3P0DP91 1061 aa12.24□□□□□ -0.45
CRLF3-205ENST00000583805 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
CRLF3-205ENST00000583805 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
CRLF3-205ENST00000583805 PLSCR1O15162 318 aa12.23□□□□□ -0.45
CRLF3-205ENST00000583805 TMC1Q8TDI8 760 aa12.23□□□□□ -0.45
CRLF3-205ENST00000583805 MYOM1P52179 1685 aa12.22□□□□□ -0.45
CRLF3-205ENST00000583805 ERBB3P21860 1342 aa12.22□□□□□ -0.45
CRLF3-205ENST00000583805 SOX12O15370 315 aa12.22□□□□□ -0.45
CRLF3-205ENST00000583805 NUBP1P53384 320 aa12.22□□□□□ -0.45
CRLF3-205ENST00000583805 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.22□□□□□ -0.45
CRLF3-205ENST00000583805 RNF25Q96BH1 459 aaPredicted RBP12.22□□□□□ -0.45
CRLF3-205ENST00000583805 FAM212AQ96EL1 285 aa12.22□□□□□ -0.45
CRLF3-205ENST00000583805 DOT1LQ8TEK3 1739 aa12.22□□□□□ -0.45
CRLF3-205ENST00000583805 LY75O60449 1722 aa12.21□□□□□ -0.45
CRLF3-205ENST00000583805 STK25O00506 426 aa12.21□□□□□ -0.45
CRLF3-205ENST00000583805 TRIM26Q12899 539 aaPredicted RBP12.21□□□□□ -0.45
CRLF3-205ENST00000583805 BCL11BQ9C0K0 894 aaPredicted RBP12.21□□□□□ -0.45
CRLF3-205ENST00000583805 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
CRLF3-205ENST00000583805 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
CRLF3-205ENST00000583805 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
CRLF3-205ENST00000583805 MAP2P11137 1827 aaKnown RBP12.2□□□□□ -0.46
CRLF3-205ENST00000583805 CHD4Q14839 1912 aa12.19□□□□□ -0.46
CRLF3-205ENST00000583805 ANKRD36BQ8N2N9 1353 aa12.19□□□□□ -0.46
CRLF3-205ENST00000583805 EXOC5O00471 708 aa12.19□□□□□ -0.46
CRLF3-205ENST00000583805 ERICH6Q7L0X2 663 aa12.19□□□□□ -0.46
CRLF3-205ENST00000583805 NME9Q86XW9 330 aa12.19□□□□□ -0.46
CRLF3-205ENST00000583805 SLC12A5Q9H2X9 1139 aa12.19□□□□□ -0.46
CRLF3-205ENST00000583805 TUBGCP6Q96RT7 1819 aa12.18□□□□□ -0.46
CRLF3-205ENST00000583805 MARCH10Q8NA82 808 aaPredicted RBP12.18□□□□□ -0.46
CRLF3-205ENST00000583805 TESK2Q96S53 571 aa12.18□□□□□ -0.46
CRLF3-205ENST00000583805 USP47Q96K76 1375 aa12.18□□□□□ -0.46
CRLF3-205ENST00000583805 ST20-MTHFSA0A0A6YYL1 179 aa12.17□□□□□ -0.46
CRLF3-205ENST00000583805 IL2RBP14784 551 aa12.17□□□□□ -0.46
CRLF3-205ENST00000583805 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
CRLF3-205ENST00000583805 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
CRLF3-205ENST00000583805 RTL1A6NKG5 1358 aa12.17□□□□□ -0.46
CRLF3-205ENST00000583805 NKX1-1Q15270 411 aaPredicted RBP12.16□□□□□ -0.46
CRLF3-205ENST00000583805 NLRP2Q9NX02 1062 aa12.16□□□□□ -0.46
CRLF3-205ENST00000583805 TMF1P82094 1093 aa12.15□□□□□ -0.46
CRLF3-205ENST00000583805 CDCA8Q53HL2 280 aa12.15□□□□□ -0.46
CRLF3-205ENST00000583805 ANKRD24Q8TF21 1146 aa12.15□□□□□ -0.46
CRLF3-205ENST00000583805 COG3Q96JB2 828 aa12.15□□□□□ -0.46
CRLF3-205ENST00000583805 SPON1Q9HCB6 807 aa12.15□□□□□ -0.46
CRLF3-205ENST00000583805 ITGB4P16144 1822 aa12.15□□□□□ -0.46
CRLF3-205ENST00000583805 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
CRLF3-205ENST00000583805 CLSPNQ9HAW4 1339 aa12.14□□□□□ -0.47
CRLF3-205ENST00000583805 TAF1LQ8IZX4 1826 aa12.14□□□□□ -0.47
CRLF3-205ENST00000583805 CHRM1P11229 460 aaPredicted RBP12.14□□□□□ -0.47
CRLF3-205ENST00000583805 IP6K1Q92551 441 aa12.14□□□□□ -0.47
CRLF3-205ENST00000583805 SMG6Q86US8 1419 aaKnown RBP12.13□□□□□ -0.47
CRLF3-205ENST00000583805 KCNQ2O43526 872 aa12.13□□□□□ -0.47
CRLF3-205ENST00000583805 SGIP1Q9BQI5 828 aa12.13□□□□□ -0.47
CRLF3-205ENST00000583805 TIMELESSQ9UNS1 1208 aa12.13□□□□□ -0.47
CRLF3-205ENST00000583805 PPP1R1BQ9UD71 204 aaPredicted RBP12.12□□□□□ -0.47
CRLF3-205ENST00000583805 KIF24Q5T7B8 1368 aa12.12□□□□□ -0.47
CRLF3-205ENST00000583805 C5P01031 1676 aa12.11□□□□□ -0.47
CRLF3-205ENST00000583805 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
CRLF3-205ENST00000583805 ANO8Q9HCE9 1232 aaPredicted RBP12.11□□□□□ -0.47
CRLF3-205ENST00000583805 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
CRLF3-205ENST00000583805 MAP3K19Q56UN5 1328 aa12.11□□□□□ -0.47
CRLF3-205ENST00000583805 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
CRLF3-205ENST00000583805 HOXC9P31274 260 aa12.1□□□□□ -0.47
CRLF3-205ENST00000583805 AMPHP49418 695 aa12.1□□□□□ -0.47
CRLF3-205ENST00000583805 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
CRLF3-205ENST00000583805 STK24Q9Y6E0 443 aa12.1□□□□□ -0.47
CRLF3-205ENST00000583805 CGNL1Q0VF96 1302 aa12.1□□□□□ -0.47
CRLF3-205ENST00000583805 MEGF6O75095 1541 aa12.08□□□□□ -0.48
CRLF3-205ENST00000583805 SLC15A2Q16348 729 aa12.08□□□□□ -0.48
CRLF3-205ENST00000583805 GTF3C3Q9Y5Q9 886 aa12.08□□□□□ -0.48
CRLF3-205ENST00000583805 TOGARAM1Q9Y4F4 1720 aa12.08□□□□□ -0.48
CRLF3-205ENST00000583805 FLT4P35916 1363 aa12.07□□□□□ -0.48
CRLF3-205ENST00000583805 ACSBG1Q96GR2 724 aa12.07□□□□□ -0.48
CRLF3-205ENST00000583805 VIRMAQ69YN4 1812 aaKnown RBP12.07□□□□□ -0.48
CRLF3-205ENST00000583805 INSRP06213 1382 aa12.06□□□□□ -0.48
CRLF3-205ENST00000583805 FYB1O15117 783 aa12.06□□□□□ -0.48
CRLF3-205ENST00000583805 SLC27A3Q5K4L6 730 aa12.06□□□□□ -0.48
CRLF3-205ENST00000583805 LTV1Q96GA3 475 aaPredicted RBP12.06□□□□□ -0.48
CRLF3-205ENST00000583805 MTFR1LQ9H019 292 aa12.06□□□□□ -0.48
CRLF3-205ENST00000583805 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
CRLF3-205ENST00000583805 NSD3Q9BZ95 1437 aa12.05□□□□□ -0.48
CRLF3-205ENST00000583805 HMGB2P26583 209 aaKnown RBP12.05□□□□□ -0.48
CRLF3-205ENST00000583805 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
CRLF3-205ENST00000583805 UBR3Q6ZT12 1888 aa12.04□□□□□ -0.48
CRLF3-205ENST00000583805 ZCRB1Q8TBF4 217 aaKnown RBP12.04□□□□□ -0.48
CRLF3-205ENST00000583805 GGNBP2Q9H3C7 697 aa12.04□□□□□ -0.48
CRLF3-205ENST00000583805 WDR70Q9NW82 654 aa12.04□□□□□ -0.48
CRLF3-205ENST00000583805 NCAPD2Q15021 1401 aa12.03□□□□□ -0.48
CRLF3-205ENST00000583805 RRS1Q15050 365 aaKnown RBP12.03□□□□□ -0.48
CRLF3-205ENST00000583805 DDX54Q8TDD1 881 aaKnown RBP12.03□□□□□ -0.48
CRLF3-205ENST00000583805 RAPGEF4Q8WZA2 1011 aa12.03□□□□□ -0.48
CRLF3-205ENST00000583805 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
CRLF3-205ENST00000583805 MAP3K5Q99683 1374 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms